Gene: Sp4g03800
General Information
Structural Information
- Species Schrenkiella parvula
- Gene Identifier Sp4g03800
- Transcript Identifier Sp4g03800.1
- Gene Type Coding gene
- Location ch4-2 : 835314-838759 : negative
Gene Family Information
- ID HOM05D002708
- #Genes/#Species 254/99
- Phylogenetic origin
- ID ORTHO05D003516
- #Genes/#Species 219/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Sp4g03800.v2.2
- pacid 45092358
Descriptions
- Description K03253 - translation initiation factor 3 subunit B (EIF3B)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006413 | IEA | InterPro | translational initiation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0003743 | IEA | InterPro | translation initiation factor activity | |
| GO:0031369 | IEA | InterPro | translation initiation factor binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005852 | IEA | InterPro | eukaryotic translation initiation factor 3 complex | |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT5G25780 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT5G25780 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT5G25780 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR034363 | eIF3B, RNA recognition motif |
| IPR015943 | WD40/YVTN repeat-like-containing domain superfamily |
| IPR000504 | RNA recognition motif domain |
| IPR011400 | Eukaryotic translation initiation factor 3 subunit B |
| IPR013979 | Translation initiation factor, beta propellor-like domain |
| IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| IPR035979 | RNA-binding domain superfamily |
| Mapman id | Description |
|---|---|
| 17.4.1.3.2 | Protein biosynthesis.translation initiation.Pre-Initiation Complex (PIC) module.eIF3 mRNA-to-PIC binding complex.component eIF3b |