Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold87G27186 Striga asiatica HOM05D005263 ORTHO05D006891 2.3e-93 345.5 173 100.0
SGA_v2.0_scaffold274G46526 Striga asiatica HOM05D005263 ORTHO05D006891 4.0e-85 318.2 173 90.2
SGA_v2.0_scaffold122G33171 Striga asiatica HOM05D005263 ORTHO05D006891 1.6e-81 306.2 188 83.5
SGA_v2.0_scaffold423G51442 Striga asiatica HOM05D005263 ORTHO05D006891 2.5e-79 298.9 203 76.4
SalBow4G2620 Salvia bowleyana HOM05D005263 ORTHO05D006891 2.8e-70 268.9 187 71.7
MSTRG.3034 Avicennia marina HOM05D005263 ORTHO05D006891 2.4e-69 265.8 187 71.7
CSS0005310 Camellia sinensis var. sinensis HOM05D005263 ORTHO05D006891 1.5e-68 263.1 188 69.7
Migut.F00003 Erythranthe guttata HOM05D005263 ORTHO05D006891 2.6e-68 262.3 188 69.7
Eucgr.I01574 Eucalyptus grandis HOM05D005263 ORTHO05D006891 3.4e-68 261.9 176 72.7
Peaxi162Scf00420g00940 Petunia axillaris HOM05D005263 ORTHO05D006891 3.4e-68 261.9 173 72.3
Dinv33264 Davidia involucrata HOM05D005263 ORTHO05D006891 9.9e-68 260.4 188 69.1
Gorai.006G000100 Gossypium raimondii HOM05D005263 ORTHO05D006891 2.2e-67 259.2 187 68.4
Aqoxy5G03006 Aquilegia oxysepala HOM05D005263 ORTHO05D006891 2.9e-67 258.8 188 69.1
Gohir.A09G000037 Gossypium hirsutum HOM05D005263 ORTHO05D006891 2.9e-67 258.8 187 68.4
Gohir.D09G000101 Gossypium hirsutum HOM05D005263 ORTHO05D006891 2.9e-67 258.8 187 68.4
CiPaw.03G000400 Carya illinoinensis HOM05D005263 ORTHO05D006891 3.8e-67 258.5 184 69.6
Ciclev10017439m.g Citrus clementina HOM05D005263 ORTHO05D006891 3.8e-67 258.5 187 68.4
Gohir.A09G000300 Gossypium hirsutum HOM05D005263 ORTHO05D006891 3.8e-67 258.5 187 67.9
Thecc.04G050600 Theobroma cacao HOM05D005263 ORTHO05D006891 3.8e-67 258.5 188 68.6
TWI60G0166 Tripterygium wilfordii HOM05D005263 ORTHO05D006891 8.4e-67 257.3 188 67.6
Solyc02g094590.3 Solanum lycopersicum HOM05D005263 ORTHO05D006891 1.1e-66 256.9 188 68.1
Sopen02g039240 Solanum pennellii HOM05D005263 ORTHO05D006891 1.1e-66 256.9 188 68.1
COL.COLO4_13398 Corchorus olitorius HOM05D005263 ORTHO05D006891 1.4e-66 256.5 188 67.6
Manes.11G073900 Manihot esculenta HOM05D005263 ORTHO05D006891 1.9e-66 256.1 187 68.4
Nitab4.5_0002901g0080 Nicotiana tabacum HOM05D005263 ORTHO05D006891 4.2e-66 255.0 188 67.6
CAN.G473.163 Capsicum annuum HOM05D005263 ORTHO05D006891 5.4e-66 254.6 188 68.1
Nitab4.5_0000519g0290 Nicotiana tabacum HOM05D005263 ORTHO05D006891 5.4e-66 254.6 188 67.6
Atru.chr6.2720 Acer truncatum HOM05D005263 ORTHO05D006891 7.1e-66 254.2 187 68.4
Actinidia36248 Actinidia chinensis HOM05D005263 ORTHO05D006891 7.1e-66 254.2 188 67.6
Cpa.g.sc70.43 Carica papaya HOM05D005263 ORTHO05D006891 7.1e-66 254.2 187 66.8
TAR622G0136 Trochodendron aralioides HOM05D005263 ORTHO05D006891 7.1e-66 254.2 188 67.0
CDE02G2322 Ceratophyllum demersum HOM05D005263 ORTHO05D006891 9.3e-66 253.8 188 67.0
Potri.014G145000 Populus trichocarpa HOM05D005263 ORTHO05D006891 1.2e-65 253.4 187 66.8
Hma1.2p1_0265F.1_g106760 Hydrangea macrophylla HOM05D005263 ORTHO05D006891 2.1e-65 252.7 188 67.0
QL02p068698 Quercus lobata HOM05D005263 ORTHO05D006891 2.1e-65 252.7 188 66.5
Sabra14G0109200 Salix brachista HOM05D005263 ORTHO05D006891 2.7e-65 252.3 187 66.3
GSVIVG01032955001 Vitis vinifera HOM05D005263 ORTHO05D006891 2.7e-65 252.3 188 67.0
Duzib147G0290 Durio zibethinus HOM05D005263 ORTHO05D006891 3.5e-65 251.9 188 68.1
CANSAT64G2729 Cannabis sativa HOM05D005263 ORTHO05D006891 4.6e-65 251.5 187 67.4
Psat3g091960 Pisum sativum HOM05D005263 ORTHO05D006891 4.6e-65 251.5 187 66.8
THA.LOC104821142 Tarenaya hassleriana HOM05D005263 ORTHO05D006891 6.0e-65 251.1 186 66.7
DCAR_000962 Daucus carota HOM05D005263 ORTHO05D006891 7.9e-65 250.8 187 67.4
unitig_52.g17691 Utricularia gibba HOM05D005263 ORTHO05D006891 2.3e-64 249.2 188 66.5
Sabra02G0180900 Salix brachista HOM05D005263 ORTHO05D006891 5.1e-64 248.1 187 66.3
CsaV3_5G021940 Cucumis sativus L. HOM05D005263 ORTHO05D006891 6.7e-64 247.7 188 65.4
AL3G10030 Arabidopsis lyrata HOM05D005263 ORTHO05D006891 8.7e-64 247.3 187 64.7
Lj7C619G12 Lonicera japonica HOM05D005263 ORTHO05D006891 8.7e-64 247.3 181 68.5
Sp3g00030 Schrenkiella parvula HOM05D005263 ORTHO05D006891 8.7e-64 247.3 187 64.2
FvH4_6g54430 Fragaria vesca HOM05D005263 ORTHO05D006891 1.5e-63 246.5 187 65.8
FAN02G2182 Fragaria x ananassa HOM05D005263 ORTHO05D006891 1.5e-63 246.5 187 65.8
Sed0001423 Sechium edule HOM05D005263 ORTHO05D006891 1.5e-63 246.5 188 66.0
BcaNung05595 Brassica carinata HOM05D005263 ORTHO05D006891 1.9e-63 246.1 187 64.2
BcaNung05596 Brassica carinata HOM05D005263 ORTHO05D006891 1.9e-63 246.1 187 64.2
Carub.0003s0003 Capsella rubella HOM05D005263 ORTHO05D006891 2.5e-63 245.7 187 64.2
MELO3C005086.2 Cucumis melo HOM05D005263 ORTHO05D006891 2.5e-63 245.7 188 64.4
Potri.002G237400 Populus trichocarpa HOM05D005263 ORTHO05D006891 2.5e-63 245.7 187 66.3
Ca_08228_v3 Cicer arietinum L. HOM05D005263 ORTHO05D006891 3.3e-63 245.4 187 65.2
Thhalv10020076m.g Eutrema salsugineum HOM05D005263 ORTHO05D006891 3.3e-63 245.4 187 64.2
Glyma.16G046000 Glycine max HOM05D005263 ORTHO05D006891 3.3e-63 245.4 187 64.7
Lalb_Chr14g0363581 Lupinus albus HOM05D005263 ORTHO05D006891 3.3e-63 245.4 187 65.2
FAN05G5194 Fragaria x ananassa HOM05D005263 ORTHO05D006891 4.3e-63 245.0 187 65.2
RcHm_v2.0_Chr2g0176681 Rosa chinensis HOM05D005263 ORTHO05D006891 4.3e-63 245.0 187 65.2
FAN09G1249 Fragaria x ananassa HOM05D005263 ORTHO05D006891 5.6e-63 244.6 187 65.8
FAN14G4399 Fragaria x ananassa HOM05D005263 ORTHO05D006891 5.6e-63 244.6 187 65.8
AT3G02060 Arabidopsis thaliana HOM05D005263 ORTHO05D006891 7.4e-63 244.2 187 63.6
Glyma.19G106000 Glycine max HOM05D005263 ORTHO05D006891 7.4e-63 244.2 187 64.2
Haze_14959 Corylus avellana HOM05D005263 ORTHO05D006891 9.6e-63 243.8 187 66.3
Cc07_g01440 Coffea canephora HOM05D005263 ORTHO05D006891 1.3e-62 243.4 187 66.3
Lj1g0009319 Lotus japonicus HOM05D005263 ORTHO05D006891 1.3e-62 243.4 187 65.2
MD17G1004500 Malus domestica HOM05D005263 ORTHO05D006891 1.3e-62 243.4 187 65.8
Prupe.3G314900 Prunus persica HOM05D005263 ORTHO05D006891 1.6e-62 243.0 186 66.1
Aa31LG5G11240 Aethionema arabicum HOM05D005263 ORTHO05D006891 3.7e-62 241.9 187 62.6
TPR.G26435 Trifolium pratense HOM05D005263 ORTHO05D006891 3.7e-62 241.9 187 64.2
ClCG01G007920 Citrullus lanatus HOM05D005263 ORTHO05D006891 4.8e-62 241.5 188 63.8
CARHR074870 Cardamine hirsuta HOM05D005263 ORTHO05D006891 1.1e-61 240.4 187 62.6
QL02p068621 Quercus lobata HOM05D005263 ORTHO05D006891 1.1e-61 240.4 188 64.9
EL10Ac6g13898 Beta vulgaris HOM05D005263 ORTHO05D006891 1.4e-61 240.0 187 64.2
AUR62017472 Chenopodium quinoa HOM05D005263 ORTHO05D006891 1.4e-61 240.0 187 64.7
Medtr7g084560 Medicago truncatula HOM05D005263 ORTHO05D006891 2.4e-61 239.2 187 64.2
PGR142G1885 Punica granatum HOM05D005263 ORTHO05D006891 2.4e-61 239.2 187 63.1
arahy.Tifrunner.gnm1.ann1.R16MRH Arachis hypogaea HOM05D005263 ORTHO05D006891 3.1e-61 238.8 187 65.2
VMungo1383G1213 Vigna mungo HOM05D005263 ORTHO05D006891 4.0e-61 238.4 187 62.6
ECA238G3309 Erigeron canadensis HOM05D005263 ORTHO05D006891 1.2e-60 236.9 187 63.1
Phvul.001G099500 Phaseolus vulgaris HOM05D005263 ORTHO05D006891 1.5e-60 236.5 187 61.5
Lsat_1_v5_gn_2_95241 Lactuca sativa HOM05D005263 ORTHO05D006891 2.0e-60 236.1 172 65.7
PSO478G0722 Papaver somniferum HOM05D005263 ORTHO05D006891 4.5e-60 235.0 188 62.8
PSO017G0637 Papaver somniferum HOM05D005263 ORTHO05D006891 2.9e-59 232.3 188 62.2
ATR0582G042 Amborella trichopoda HOM05D005263 ORTHO05D006891 7.1e-58 227.6 187 61.0
HanXRQChr14g0451541 Helianthus annuus HOM05D005263 ORTHO05D006891 1.6e-57 226.5 187 62.6
CSS0025694 Camellia sinensis var. sinensis HOM05D005263 ORTHO05D006891 6.7e-56 221.1 166 66.3
arahy.Tifrunner.gnm1.ann1.J2Y82Q Arachis hypogaea HOM05D005263 ORTHO05D006891 4.3e-55 218.4 165 66.7
Zm00001eb113530 Zea mays HOM05D005263 ORTHO05D006891 2.1e-54 216.1 188 56.4
SGA_v2.0_scaffold1G00284 Striga asiatica HOM05D005263 ORTHO05D006891 2.2e-51 206.1 156 69.9
HPP92_009750 Vanilla planifolia HOM05D005263 ORTHO05D006891 6.1e-49 198.0 186 53.8
HPP92_009765 Vanilla planifolia HOM05D005263 ORTHO05D006891 3.9e-48 195.3 186 53.2
Mapoly0015s0011 Marchantia polymorpha HOM05D005263 ORTHO05D006891 8.8e-40 167.5 187 48.7
Hma1.2p1_0265F.1_g106780 Hydrangea macrophylla HOM05D005263 ORTHO05D006891 2.2e-38 162.9 114 65.8
Oeu048685.1 Olea europaea HOM05D005263 ORTHO05D006891 8.2e-38 161.0 113 65.5
AagrBONN_evm.TU.Sc2ySwM_117.63 Anthoceros agrestis HOM05D005263 ORTHO05D006891 2.5e-34 149.4 187 43.9
SMO364G0436 Selaginella moellendorffii HOM05D005263 ORTHO05D006891 2.4e-29 132.9 185 42.2
PGSC0003DMG400020233 Solanum tuberosum HOM05D005263 ORTHO05D006891 2.0e-28 129.8 94 64.9
CBR_g56393 Chara braunii HOM05D000409 ORTHO05D000184 4.2e-26 122.1 179 34.6
Nn4g22084 Nelumbo nucifera HOM05D005263 ORTHO05D006891 4.8e-22 108.6 57 91.2
vmacro22254 Vaccinium macrocarpon HOM05D005263 ORTHO05D006891 1.1e-21 107.5 57 91.2
Hma1.2p1_0265F.1_g106770 Hydrangea macrophylla HOM05D005263 ORTHO05D006891 9.1e-21 104.4 57 89.5
QL02p068671 Quercus lobata HOM05D005263 ORTHO05D006891 5.9e-20 101.7 57 84.2
MCO01G164 Micromonas commoda HOM05D005263 ORTHO05D006891 2.4e-13 79.7 71 53.5
vmacro22253 Vaccinium macrocarpon HOM05D005263 ORTHO05D006891 1.5e-10 70.5 54 61.1
BcaC01g05768 Brassica carinata HOM05D005263 ORTHO05D006891 2.7e-09 66.2 90 45.6
Lalb_Chr24g0402881 Lupinus albus HOM05D005263 ORTHO05D006891 2.7e-09 66.2 65 50.8
Pp3c2_18110 Physcomitrium patens HOM05D005263 ORTHO05D006891 3.0e-08 62.8 70 48.6
Zm00001eb285440 Zea mays HOM05D000915 ORTHO05D001662 8.3e-06 54.7 58 43.1


User provided reference genes

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