Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold7G03592 Striga asiatica HOM05D004008 ORTHO05D005383 1.1e-201 706.4 365 100.0
SGA_v2.0_scaffold186G40215 Striga asiatica HOM05D004008 ORTHO05D005383 2.5e-169 599.0 396 80.1
MSTRG.14544 Avicennia marina HOM05D004008 ORTHO05D005383 1.3e-162 576.6 382 79.8
MSTRG.13067 Avicennia marina HOM05D004008 ORTHO05D005383 2.8e-160 568.9 382 80.4
Migut.M01552 Erythranthe guttata HOM05D004008 ORTHO05D005383 6.3e-157 557.8 381 77.7
Migut.H01689 Erythranthe guttata HOM05D004008 ORTHO05D005383 7.0e-156 554.3 384 78.4
unitig_21.g20251 Utricularia gibba HOM05D004008 ORTHO05D005383 1.9e-153 546.2 382 75.4
SalBow8G2118 Salvia bowleyana HOM05D004008 ORTHO05D005383 2.5e-153 545.8 382 75.4
Cc05_g16090 Coffea canephora HOM05D004008 ORTHO05D005383 4.7e-152 541.6 382 74.9
Oeu052004.1 Olea europaea HOM05D004008 ORTHO05D005383 1.4e-151 540.0 378 77.2
Hma1.2p1_0637F.1_g193530 Hydrangea macrophylla HOM05D004008 ORTHO05D005383 5.4e-148 528.1 376 73.7
CsaV3_3G031800 Cucumis sativus L. HOM05D004008 ORTHO05D005383 1.5e-145 520.0 381 72.2
Dinv19616 Davidia involucrata HOM05D004008 ORTHO05D005383 2.5e-145 519.2 378 73.0
Peaxi162Scf00452g00831 Petunia axillaris HOM05D004008 ORTHO05D005383 2.8e-144 515.8 359 74.9
Hma1.2p1_0334F.1_g128730 Hydrangea macrophylla HOM05D004008 ORTHO05D005383 3.6e-144 515.4 355 76.9
Lj1A905T43 Lonicera japonica HOM05D004008 ORTHO05D005383 6.2e-144 514.6 378 73.0
Prupe.1G348400 Prunus persica HOM05D004008 ORTHO05D005383 6.2e-144 514.6 368 74.5
Potri.005G091600 Populus trichocarpa HOM05D004008 ORTHO05D005383 8.0e-144 514.2 358 76.0
Gohir.A03G165100 Gossypium hirsutum HOM05D004008 ORTHO05D005383 1.4e-143 513.5 355 76.9
Sopen07g034650 Solanum pennellii HOM05D004008 ORTHO05D005383 1.8e-143 513.1 359 74.4
CANSAT78G1304 Cannabis sativa HOM05D004008 ORTHO05D005383 2.3e-143 512.7 358 75.4
Lsat_1_v5_gn_7_112100 Lactuca sativa HOM05D004008 ORTHO05D005383 3.1e-143 512.3 365 74.5
Solyc07g066470.3 Solanum lycopersicum HOM05D004008 ORTHO05D005383 4.0e-143 511.9 359 74.1
Sed0006741 Sechium edule HOM05D004008 ORTHO05D005383 6.8e-143 511.1 366 74.6
PGSC0003DMG400022126 Solanum tuberosum HOM05D004008 ORTHO05D005383 8.9e-143 510.8 359 74.4
CSS0024885 Camellia sinensis var. sinensis HOM05D004008 ORTHO05D005383 1.2e-142 510.4 371 73.0
Dinv42507 Davidia involucrata HOM05D004008 ORTHO05D005383 2.6e-142 509.2 366 73.8
Gohir.D02G188300 Gossypium hirsutum HOM05D004008 ORTHO05D005383 2.6e-142 509.2 355 76.3
Actinidia12791 Actinidia chinensis HOM05D004008 ORTHO05D005383 4.4e-142 508.4 363 74.4
Duzib132G0865 Durio zibethinus HOM05D004008 ORTHO05D005383 5.8e-142 508.1 357 76.2
ClCG10G012060 Citrullus lanatus HOM05D004008 ORTHO05D005383 7.5e-142 507.7 396 71.0
Haze_11762 Corylus avellana HOM05D004008 ORTHO05D005383 7.5e-142 507.7 357 74.8
Manes.11G103000 Manihot esculenta HOM05D004008 ORTHO05D005383 9.8e-142 507.3 359 74.7
Eucgr.C00142 Eucalyptus grandis HOM05D004008 ORTHO05D005383 1.7e-141 506.5 356 75.0
Gorai.005G211000 Gossypium raimondii HOM05D004008 ORTHO05D005383 1.7e-141 506.5 355 76.1
Potri.007G072500 Populus trichocarpa HOM05D004008 ORTHO05D005383 1.7e-141 506.5 358 74.3
THA.LOC104800860 Tarenaya hassleriana HOM05D004008 ORTHO05D005383 2.9e-141 505.8 376 71.8
Glyma.11G094700 Glycine max HOM05D004008 ORTHO05D005383 3.7e-141 505.4 325 79.4
Cfa008746 Carpinus fangiana HOM05D004008 ORTHO05D005383 6.4e-141 504.6 357 74.2
CAN.G943.40 Capsicum annuum HOM05D004008 ORTHO05D005383 8.3e-141 504.2 359 73.0
Ciclev10031858m.g Citrus clementina HOM05D004008 ORTHO05D005383 8.3e-141 504.2 364 73.6
GSVIVG01002505001 Vitis vinifera HOM05D004008 ORTHO05D005383 8.3e-141 504.2 323 80.5
Thecc.02G158900 Theobroma cacao HOM05D004008 ORTHO05D005383 1.4e-140 503.4 355 76.6
AL6G18680 Arabidopsis lyrata HOM05D004008 ORTHO05D005383 3.2e-140 502.3 383 69.7
COL.COLO4_33043 Corchorus olitorius HOM05D004008 ORTHO05D005383 3.2e-140 502.3 370 74.3
HanXRQChr05g0153591 Helianthus annuus HOM05D004008 ORTHO05D005383 3.2e-140 502.3 338 76.6
Medtr4g076600 Medicago truncatula HOM05D004008 ORTHO05D005383 3.2e-140 502.3 325 79.7
Glyma.12G021100 Glycine max HOM05D004008 ORTHO05D005383 5.4e-140 501.5 325 79.1
TWI75G1091 Tripterygium wilfordii HOM05D004008 ORTHO05D005383 9.2e-140 500.7 353 75.1
Gorai.012G134300 Gossypium raimondii HOM05D004008 ORTHO05D005383 1.2e-139 500.4 357 74.8
CiPaw.01G129500 Carya illinoinensis HOM05D004008 ORTHO05D005383 1.6e-139 500.0 349 75.4
RcHm_v2.0_Chr4g0446801 Rosa chinensis HOM05D004008 ORTHO05D005383 1.6e-139 500.0 354 74.6
TAR626G0539 Trochodendron aralioides HOM05D004008 ORTHO05D005383 1.6e-139 500.0 363 70.8
TAR626G1776 Trochodendron aralioides HOM05D004008 ORTHO05D005383 1.6e-139 500.0 363 70.8
AT5G08280 Arabidopsis thaliana HOM05D004008 ORTHO05D005383 2.1e-139 499.6 383 69.5
Nitab4.5_0001749g0010 Nicotiana tabacum HOM05D004008 ORTHO05D005383 2.1e-139 499.6 354 74.0
Carub.0006s0716 Capsella rubella HOM05D004008 ORTHO05D005383 2.7e-139 499.2 383 69.7
Peaxi162Scf00006g00139 Petunia axillaris HOM05D004008 ORTHO05D005383 4.6e-139 498.4 398 67.8
Aa31LG3G18290 Aethionema arabicum HOM05D004008 ORTHO05D005383 6.0e-139 498.0 382 70.2
MD13G1004100 Malus domestica HOM05D004008 ORTHO05D005383 6.0e-139 498.0 361 73.1
Nitab4.5_0001791g0020 Nicotiana tabacum HOM05D004008 ORTHO05D005383 6.0e-139 498.0 368 71.7
Psat7g172760 Pisum sativum HOM05D004008 ORTHO05D005383 1.0e-138 497.3 364 71.7
Cpa.g.sc43.43 Carica papaya HOM05D004008 ORTHO05D005383 2.3e-138 496.1 367 72.8
MD16G1003400 Malus domestica HOM05D004008 ORTHO05D005383 3.9e-138 495.4 361 72.9
QL12p007515 Quercus lobata HOM05D004008 ORTHO05D005383 3.9e-138 495.4 334 77.5
arahy.Tifrunner.gnm1.ann1.416KLQ Arachis hypogaea HOM05D004008 ORTHO05D005383 6.6e-138 494.6 355 74.1
Duzib248G1235 Durio zibethinus HOM05D004008 ORTHO05D005383 6.6e-138 494.6 360 74.4
HanXRQChr01g0007731 Helianthus annuus HOM05D004008 ORTHO05D005383 8.6e-138 494.2 339 75.8
arahy.Tifrunner.gnm1.ann1.KXDS8S Arachis hypogaea HOM05D004008 ORTHO05D005383 1.1e-137 493.8 355 74.4
CARHR204850 Cardamine hirsuta HOM05D004008 ORTHO05D005383 1.1e-137 493.8 383 69.2
Sp6g34680 Schrenkiella parvula HOM05D004008 ORTHO05D005383 1.5e-137 493.4 383 70.5
RcHm_v2.0_Chr1g0330101 Rosa chinensis HOM05D004008 ORTHO05D005383 1.9e-137 493.0 330 76.1
Phvul.011G177100 Phaseolus vulgaris HOM05D004008 ORTHO05D005383 2.5e-137 492.7 327 78.9
A10p28400 Brassica napus HOM05D004008 ORTHO05D005383 4.3e-137 491.9 383 69.7
BraA10t44887Z Brassica rapa HOM05D004008 ORTHO05D005383 4.3e-137 491.9 383 69.7
TWI12G0055 Tripterygium wilfordii HOM05D004008 ORTHO05D005383 4.3e-137 491.9 368 72.3
arahy.Tifrunner.gnm1.ann1.6Z73IP Arachis hypogaea HOM05D004008 ORTHO05D005383 7.3e-137 491.1 317 79.2
C09p68660 Brassica napus HOM05D004008 ORTHO05D005383 7.3e-137 491.1 382 68.3
Ca_26057_v3 Cicer arietinum L. HOM05D004008 ORTHO05D005383 7.3e-137 491.1 325 77.8
FAN07G1552 Fragaria x ananassa HOM05D004008 ORTHO05D005383 7.3e-137 491.1 353 73.4
Thhalv10013814m.g Eutrema salsugineum HOM05D004008 ORTHO05D005383 1.2e-136 490.3 383 69.7
Glyma.01G227400 Glycine max HOM05D004008 ORTHO05D005383 1.6e-136 490.0 350 74.0
TPR.G11683 Trifolium pratense HOM05D004008 ORTHO05D005383 1.6e-136 490.0 370 70.5
FvH4_7g04700 Fragaria vesca HOM05D004008 ORTHO05D005383 2.1e-136 489.6 330 76.1
FAN10G2193 Fragaria x ananassa HOM05D004008 ORTHO05D005383 2.1e-136 489.6 330 76.1
FAN12G0417 Fragaria x ananassa HOM05D004008 ORTHO05D005383 2.1e-136 489.6 353 73.1
Nitab4.5_0000134g0020 Nicotiana tabacum HOM05D004008 ORTHO05D005383 2.1e-136 489.6 378 69.8
Sc10g0004580 Simmondsia chinensis HOM05D004008 ORTHO05D005383 2.8e-136 489.2 353 72.0
Rhsim06G0054400 Rhododendron simsii HOM05D004008 ORTHO05D005383 3.6e-136 488.8 367 72.8
BolC9t59612H Brassica oleracea HOM05D004008 ORTHO05D005383 4.7e-136 488.4 382 68.1
VMungo1215G1012 Vigna mungo HOM05D004008 ORTHO05D005383 6.2e-136 488.0 322 78.0
BcaNung05097 Brassica carinata HOM05D004008 ORTHO05D005383 3.1e-135 485.7 377 70.8
Lalb_Chr09g0320431 Lupinus albus HOM05D004008 ORTHO05D005383 4.0e-135 485.3 360 71.7
C03p04200 Brassica napus HOM05D004008 ORTHO05D005383 8.9e-135 484.2 380 69.2
A03p03710 Brassica napus HOM05D004008 ORTHO05D005383 1.2e-134 483.8 352 73.0
BraA03t09719Z Brassica rapa HOM05D004008 ORTHO05D005383 1.2e-134 483.8 352 73.0
LjContig00222g0009052 Lotus japonicus HOM05D004008 ORTHO05D005383 1.2e-134 483.8 330 76.1
BcaB01g05618 Brassica carinata HOM05D004008 ORTHO05D005383 1.5e-134 483.4 383 69.2
BolC3t12952H Brassica oleracea HOM05D004008 ORTHO05D005383 1.5e-134 483.4 383 69.2
PGR142G0362 Punica granatum HOM05D004008 ORTHO05D005383 1.5e-134 483.4 356 71.9
C02p03470 Brassica napus HOM05D004008 ORTHO05D005383 7.6e-134 481.1 380 67.9
BraA02t04947Z Brassica rapa HOM05D004008 ORTHO05D005383 7.6e-134 481.1 380 67.9
Nitab4.5_0001080g0030 Nicotiana tabacum HOM05D004008 ORTHO05D005383 7.6e-134 481.1 389 67.1
Ah.10g029970 Amaranthus hybridus HOM05D004008 ORTHO05D005383 9.9e-134 480.7 332 74.4
FAN03G0704 Fragaria x ananassa HOM05D004008 ORTHO05D005383 9.9e-134 480.7 327 75.5
ATR0763G059 Amborella trichopoda HOM05D004008 ORTHO05D005383 2.2e-133 479.6 333 73.6
Phvul.002G034500 Phaseolus vulgaris HOM05D004008 ORTHO05D005383 2.2e-133 479.6 322 76.1
VMungo1127G2017 Vigna mungo HOM05D004008 ORTHO05D005383 2.9e-133 479.2 321 77.3
BolC2t06308H Brassica oleracea HOM05D004008 ORTHO05D005383 6.4e-133 478.0 380 67.4
Gohir.A04G108500 Gossypium hirsutum HOM05D004008 ORTHO05D005383 6.4e-133 478.0 355 73.0
Aqoxy6G00207 Aquilegia oxysepala HOM05D004008 ORTHO05D005383 2.4e-132 476.1 326 77.0
BcaB08g37268 Brassica carinata HOM05D004008 ORTHO05D005383 4.1e-132 475.3 369 68.3
ECA248G2166 Erigeron canadensis HOM05D004008 ORTHO05D005383 4.1e-132 475.3 308 79.2
EL10Ac2g02758 Beta vulgaris HOM05D004008 ORTHO05D005383 5.4e-132 474.9 332 72.6
Hund13394 Selenicereus undatus HOM05D004008 ORTHO05D005383 5.4e-132 474.9 332 73.8
CSS0025050 Camellia sinensis var. sinensis HOM05D004008 ORTHO05D005383 7.1e-132 474.6 370 69.2
PSO541G2232 Papaver somniferum HOM05D004008 ORTHO05D005383 7.1e-132 474.6 358 68.7
CDE05G3126 Ceratophyllum demersum HOM05D004008 ORTHO05D005383 9.2e-132 474.2 354 70.3
FAN17G0554 Fragaria x ananassa HOM05D004008 ORTHO05D005383 9.2e-132 474.2 300 79.7
vmacro11667 Vaccinium macrocarpon HOM05D004008 ORTHO05D005383 9.2e-132 474.2 467 58.5
Sabra07G0061100 Salix brachista HOM05D004008 ORTHO05D005383 1.6e-131 473.4 436 61.0
PSO675G0755 Papaver somniferum HOM05D004008 ORTHO05D005383 3.5e-131 472.2 358 68.4
Sabra05G0076100 Salix brachista HOM05D004008 ORTHO05D005383 6.0e-131 471.5 422 63.0
HPP92_002271 Vanilla planifolia HOM05D004008 ORTHO05D005383 6.0e-131 471.5 369 67.2
CDE11G0020 Ceratophyllum demersum HOM05D004008 ORTHO05D005383 7.8e-131 471.1 354 69.8
AUR62031735 Chenopodium quinoa HOM05D004008 ORTHO05D005383 3.9e-130 468.8 352 69.3
FAN06G1123 Fragaria x ananassa HOM05D004008 ORTHO05D005383 3.9e-130 468.8 330 73.9
FAN06G2867 Fragaria x ananassa HOM05D004008 ORTHO05D005383 3.9e-130 468.8 330 73.9
MBI18_g03839_MAGBIO Magnolia biondii HOM05D004008 ORTHO05D005383 5.1e-130 468.4 366 68.3
MELO3C024010.2 Cucumis melo HOM05D004008 ORTHO05D005383 1.5e-129 466.8 285 83.5
AUR62032620 Chenopodium quinoa HOM05D004008 ORTHO05D005383 8.9e-127 457.6 300 77.3
Gohir.D04G148100 Gossypium hirsutum HOM05D004008 ORTHO05D005383 2.6e-126 456.1 285 81.8
CDE02G2123 Ceratophyllum demersum HOM05D004008 ORTHO05D005383 7.6e-126 454.5 316 74.1
Pp3c6_15990 Physcomitrium patens HOM05D004008 ORTHO05D005383 8.4e-125 451.1 340 69.7
Lj4g0025599 Lotus japonicus HOM05D004008 ORTHO05D005383 1.4e-124 450.3 357 68.1
Pp3c5_16770 Physcomitrium patens HOM05D004008 ORTHO05D005383 2.4e-124 449.5 313 73.5
DCAR_013737 Daucus carota HOM05D004008 ORTHO05D005383 7.1e-124 448.0 346 70.2
Os02g0168800 Oryza sativa ssp. japonica HOM05D004008 ORTHO05D005383 1.6e-123 446.8 329 70.2
Zm00001eb207370 Zea mays HOM05D004008 ORTHO05D005383 2.1e-123 446.4 336 69.3
Mapoly0015s0060 Marchantia polymorpha HOM05D004008 ORTHO05D005383 4.6e-123 445.3 337 68.5
Pp3c15_6300 Physcomitrium patens HOM05D004008 ORTHO05D005383 5.1e-122 441.8 331 69.8
CBR_g48425 Chara braunii HOM05D004008 ORTHO05D005383 5.6e-121 438.3 335 68.4
SMO364G0819 Selaginella moellendorffii HOM05D004008 ORTHO05D005383 1.2e-118 430.6 335 67.8
BcaC03g13214 Brassica carinata HOM05D004008 ORTHO05D005383 2.0e-118 429.9 380 62.6
Zm00001eb233020 Zea mays HOM05D004008 ORTHO05D005383 9.9e-118 427.6 300 72.7
SEGI_21965 Sequoiadendron giganteum HOM05D004008 ORTHO05D005383 1.1e-116 424.1 299 72.9
TAR624G0715 Trochodendron aralioides HOM05D004008 ORTHO05D005383 1.9e-116 423.3 321 70.1
Cre16.g663900 Chlamydomonas reinhardtii HOM05D004008 ORTHO05D005383 8.1e-104 381.3 300 66.0
MCO01G747 Micromonas commoda HOM05D004008 ORTHO05D005383 1.3e-101 374.0 312 63.8
Sed0020742 Sechium edule HOM05D004008 ORTHO05D005383 1.3e-101 374.0 237 82.7
Oeu001944.1 Olea europaea HOM05D004008 ORTHO05D005383 8.4e-101 371.3 260 77.3
FvH4_4g37020 Fragaria vesca HOM05D004008 ORTHO05D005383 4.1e-95 352.4 242 77.7
AagrBONN_evm.TU.Sc2ySwM_117.3714 Anthoceros agrestis HOM05D004008 ORTHO05D005383 5.3e-87 325.5 216 78.7
PRCOL_00005560 Prasinoderma coloniale HOM05D004008 ORTHO05D005383 1.7e-85 320.5 290 57.6
Nn7g38125 Nelumbo nucifera HOM05D004008 ORTHO05D005383 7.0e-71 271.9 198 69.7
arahy.Tifrunner.gnm1.ann1.VI50KN Arachis hypogaea HOM05D004008 ORTHO05D005383 9.4e-68 261.5 198 71.2
Haze_26918 Corylus avellana HOM05D004008 ORTHO05D163716 3.1e-63 246.5 309 48.9
Psat5g025240 Pisum sativum HOM05D004008 ORTHO05D005383 4.5e-62 242.7 310 48.4
Actinidia07354 Actinidia chinensis HOM05D004008 ORTHO05D005383 1.6e-51 207.6 379 39.6
Psat5g278360 Pisum sativum HOM05D004008 ORTHO05D000002 2.3e-45 187.2 113 83.2
BcaC07g39332 Brassica carinata HOM05D004008 ORTHO05D032875 3.7e-40 169.9 230 50.0
C08p23470 Brassica napus HOM05D004008 ORTHO05D032875 8.3e-40 168.7 167 60.5
BolC8t49976H Brassica oleracea HOM05D004008 ORTHO05D032875 8.3e-40 168.7 167 60.5
Glyma.11G015433 Glycine max HOM05D004008 ORTHO05D005383 2.0e-33 147.5 113 66.4
BcaC08g43816 Brassica carinata HOM05D004008 ORTHO05D013026 3.2e-31 140.2 101 66.3
BcaC04g20718 Brassica carinata HOM05D004008 ORTHO05D027220 9.2e-31 138.7 96 69.8
C09p39940 Brassica napus HOM05D004008 ORTHO05D027220 9.2e-31 138.7 96 69.8
C03p57930 Brassica napus HOM05D004008 ORTHO05D027220 6.0e-30 136.0 96 68.8
C02p56520 Brassica napus HOM05D000109 ORTHO05D000210 7.8e-30 135.6 95 68.4
BolC9t56891H Brassica oleracea HOM05D004008 ORTHO05D013026 5.0e-29 132.9 100 65.0
BcaC03g17816 Brassica carinata HOM05D003055 ORTHO05D013026 6.2e-27 125.9 99 60.6
C02p58390 Brassica napus HOM05D003055 ORTHO05D013026 8.9e-26 122.1 98 60.2
Cre02.g113850 Chlamydomonas reinhardtii HOM05D004008 ORTHO05D145669 4.4e-25 119.8 361 29.9
BolC3t18065H Brassica oleracea HOM05D003055 ORTHO05D013026 8.9e-18 95.5 61 73.8
TPR.G13755 Trifolium pratense HOM05D004008 ORTHO05D410752 1.2e-17 95.1 67 76.1
Psat6g163360 Pisum sativum HOM05D005575 ORTHO05D000484 3.4e-17 93.6 49 93.9
C05p24790 Brassica napus HOM05D003055 ORTHO05D013026 2.4e-07 60.8 35 71.4
Rhsim06G0151600 Rhododendron simsii HOM05D001371 ORTHO05D001319 5.4e-07 59.7 41 80.5
BcaC01g02956 Brassica carinata HOM05D003055 ORTHO05D013026 2.7e-06 57.4 35 68.6


User provided reference genes

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