Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold76G25107 Striga asiatica HOM05D005539 ORTHO05D006644 0.0e+00 1774.2 918 100.0
Migut.F01380 Erythranthe guttata HOM05D005539 ORTHO05D006644 0.0e+00 1082.4 927 61.8
MSTRG.8325 Avicennia marina HOM05D005539 ORTHO05D006644 5.7e-311 1070.8 916 62.6
Oeu064386.1 Olea europaea HOM05D005539 ORTHO05D006644 1.6e-286 989.6 922 56.6
Hma1.2p1_0703F.1_g206530 Hydrangea macrophylla HOM05D005539 ORTHO05D006644 1.9e-274 949.5 924 54.4
Peaxi162Scf00825g00123 Petunia axillaris HOM05D005539 ORTHO05D006644 1.4e-272 943.3 866 56.5
Gohir.A10G235300 Gossypium hirsutum HOM05D005539 ORTHO05D006644 1.1e-266 923.7 879 55.5
Gohir.D10G247700 Gossypium hirsutum HOM05D005539 ORTHO05D006644 7.2e-266 921.0 879 55.5
TAR369G0030 Trochodendron aralioides HOM05D005539 ORTHO05D006644 1.2e-265 920.2 926 53.6
Sopen11g010350 Solanum pennellii HOM05D005539 ORTHO05D006644 7.9e-265 917.5 868 55.4
GSVIVG01032835001 Vitis vinifera HOM05D005539 ORTHO05D006644 7.9e-265 917.5 925 53.4
Gorai.011G286200 Gossypium raimondii HOM05D005539 ORTHO05D006644 8.8e-264 914.1 879 55.2
COL.COLO4_25704 Corchorus olitorius HOM05D005539 ORTHO05D006644 3.3e-263 912.1 924 53.0
CAN.G1694.1 Capsicum annuum HOM05D005539 ORTHO05D006644 2.2e-262 909.4 920 53.2
Duzib106G1755 Durio zibethinus HOM05D005539 ORTHO05D006644 2.2e-262 909.4 876 55.4
Lj8A68G37 Lonicera japonica HOM05D005539 ORTHO05D006644 8.2e-262 907.5 921 53.7
Thecc.10G020000 Theobroma cacao HOM05D005539 ORTHO05D006644 1.4e-261 906.7 877 55.2
Manes.10G013600 Manihot esculenta HOM05D005539 ORTHO05D006644 4.1e-261 905.2 873 54.6
Cc02_g06620 Coffea canephora HOM05D005539 ORTHO05D006644 1.7e-259 899.8 874 54.0
HanXRQChr14g0459831 Helianthus annuus HOM05D005539 ORTHO05D006644 1.4e-256 890.2 921 51.2
CiPaw.01G297900 Carya illinoinensis HOM05D005539 ORTHO05D006644 1.8e-256 889.8 869 54.8
RcHm_v2.0_Chr1g0370081 Rosa chinensis HOM05D005539 ORTHO05D006644 5.2e-256 888.3 877 54.3
Actinidia29697 Actinidia chinensis HOM05D005539 ORTHO05D006644 1.1e-255 887.1 818 57.2
Prupe.2G249200 Prunus persica HOM05D005539 ORTHO05D006644 1.5e-255 886.7 920 52.6
MD01G1152200 Malus domestica HOM05D005539 ORTHO05D006644 5.7e-255 884.8 920 52.7
Rhsim09G0176800 Rhododendron simsii HOM05D005539 ORTHO05D006644 7.4e-255 884.4 926 53.1
Atru.chr12.24 Acer truncatum HOM05D005539 ORTHO05D006644 2.2e-254 882.9 880 54.3
FvH4_7g24380 Fragaria vesca HOM05D005539 ORTHO05D006644 1.8e-253 879.8 923 52.4
ECA238G2434 Erigeron canadensis HOM05D005539 ORTHO05D006644 3.1e-253 879.0 918 51.9
Actinidia33928 Actinidia chinensis HOM05D005539 ORTHO05D006644 1.2e-252 877.1 921 51.7
Nn2g13702 Nelumbo nucifera HOM05D005539 ORTHO05D006644 1.0e-251 874.0 918 51.3
FAN10G0075 Fragaria x ananassa HOM05D005539 ORTHO05D006644 1.1e-250 870.5 878 53.2
Lsat_1_v5_gn_2_122921 Lactuca sativa HOM05D005539 ORTHO05D006644 1.1e-250 870.5 921 52.6
FAN01G2659 Fragaria x ananassa HOM05D005539 ORTHO05D006644 3.2e-250 869.0 877 53.0
Potri.010G189700 Populus trichocarpa HOM05D005539 ORTHO05D006644 4.2e-250 868.6 921 51.4
Ciclev10030725m.g Citrus clementina HOM05D005539 ORTHO05D006644 5.5e-250 868.2 880 53.0
EL10Ac2g04818 Beta vulgaris HOM05D005539 ORTHO05D006644 2.7e-249 865.9 926 51.3
CANSAT56G2522 Cannabis sativa HOM05D005539 ORTHO05D006644 2.7e-249 865.9 872 53.1
Potri.008G067600 Populus trichocarpa HOM05D005539 ORTHO05D006644 2.7e-249 865.9 919 51.4
Cpa.g.sc19.181 Carica papaya HOM05D005539 ORTHO05D006644 6.1e-249 864.8 881 52.7
Eucgr.J00217 Eucalyptus grandis HOM05D005539 ORTHO05D006644 2.0e-247 859.8 877 52.5
Hund15944 Selenicereus undatus HOM05D005539 ORTHO05D006644 7.5e-247 857.8 931 50.4
PGR044G2440 Punica granatum HOM05D005539 ORTHO05D006644 1.7e-246 856.7 873 52.2
DCAR_011807 Daucus carota HOM05D005539 ORTHO05D006644 1.4e-245 853.6 920 51.3
Aqoxy4G02586 Aquilegia oxysepala HOM05D005539 ORTHO05D006644 1.8e-245 853.2 927 51.8
Sabra10G0146300 Salix brachista HOM05D005539 ORTHO05D006644 1.6e-244 850.1 943 49.2
FAN03G1336 Fragaria x ananassa HOM05D005539 ORTHO05D006644 3.5e-244 849.0 877 52.5
AUR62012239 Chenopodium quinoa HOM05D005539 ORTHO05D006644 1.0e-243 847.4 925 49.8
AUR62022871 Chenopodium quinoa HOM05D005539 ORTHO05D006644 2.1e-241 839.7 937 49.5
vmacro10050 Vaccinium macrocarpon HOM05D005539 ORTHO05D006644 1.4e-240 837.0 870 52.9
arahy.Tifrunner.gnm1.ann1.W7ADHZ Arachis hypogaea HOM05D005539 ORTHO05D006644 8.8e-240 834.3 872 51.5
CsaV3_5G010080 Cucumis sativus L. HOM05D005539 ORTHO05D006644 2.2e-238 829.7 882 51.7
THA.LOC104826852 Tarenaya hassleriana HOM05D005539 ORTHO05D006644 2.8e-238 829.3 876 50.5
arahy.Tifrunner.gnm1.ann1.4ME2IF Arachis hypogaea HOM05D005539 ORTHO05D006644 6.3e-238 828.2 872 51.4
Lalb_Chr15g0084151 Lupinus albus HOM05D005539 ORTHO05D006644 6.3e-238 828.2 878 51.8
Glyma.11G229000 Glycine max HOM05D005539 ORTHO05D006644 8.3e-238 827.8 873 50.9
Dinv17988 Davidia involucrata HOM05D005539 ORTHO05D006644 3.1e-237 825.9 765 56.6
MELO3C025184.2 Cucumis melo HOM05D005539 ORTHO05D006644 1.2e-236 823.9 883 51.8
FAN06G4384 Fragaria x ananassa HOM05D005539 ORTHO05D006644 2.0e-236 823.2 923 49.8
Sc14g0005370 Simmondsia chinensis HOM05D005539 ORTHO05D006644 1.0e-235 820.8 832 52.0
Sed0009998 Sechium edule HOM05D005539 ORTHO05D006644 1.3e-235 820.5 877 51.0
VMungo1383G3500 Vigna mungo HOM05D005539 ORTHO05D006644 2.9e-235 819.3 873 50.5
Phvul.001G242300 Phaseolus vulgaris HOM05D005539 ORTHO05D006644 6.6e-235 818.1 873 50.2
Lj6g0015972 Lotus japonicus HOM05D005539 ORTHO05D006644 1.4e-232 810.4 874 49.9
PSO339G2908 Papaver somniferum HOM05D005539 ORTHO05D006644 1.8e-232 810.1 925 48.8
Haze_17219 Corylus avellana HOM05D005539 ORTHO05D006644 3.4e-231 805.8 935 48.4
Medtr3g070390 Medicago truncatula HOM05D005539 ORTHO05D006644 1.1e-229 800.8 872 49.9
Psat5g128120 Pisum sativum HOM05D005539 ORTHO05D006644 1.0e-227 794.3 870 50.3
Ca_15119_v3 Cicer arietinum L. HOM05D005539 ORTHO05D006644 1.2e-225 787.3 869 49.3
AL6G15570 Arabidopsis lyrata HOM05D005539 ORTHO05D006644 1.4e-224 783.9 928 46.2
A10p30680 Brassica napus HOM05D005539 ORTHO05D006644 4.0e-224 782.3 876 48.1
PSO384G3240 Papaver somniferum HOM05D005539 ORTHO05D006644 4.0e-224 782.3 925 47.4
C09p71160 Brassica napus HOM05D005539 ORTHO05D006644 2.0e-223 780.0 876 47.6
BolC9t59878H Brassica oleracea HOM05D005539 ORTHO05D006644 4.4e-223 778.9 902 47.0
AT5G05680 Arabidopsis thaliana HOM05D005539 ORTHO05D006644 1.7e-222 776.9 876 47.6
Sc14g0005420 Simmondsia chinensis HOM05D005539 ORTHO05D006644 2.9e-222 776.2 707 55.9
Carub.0006s0457 Capsella rubella HOM05D005539 ORTHO05D006644 4.9e-222 775.4 874 47.9
Sp6g37210 Schrenkiella parvula HOM05D005539 ORTHO05D006644 1.4e-221 773.9 875 48.3
Thhalv10012715m.g Eutrema salsugineum HOM05D005539 ORTHO05D006644 2.3e-219 766.5 875 47.3
ClCG07G004120 Citrullus lanatus HOM05D005539 ORTHO05D006644 3.0e-219 766.1 874 49.3
CSS0043358 Camellia sinensis var. sinensis HOM05D005539 ORTHO05D006644 6.6e-219 765.0 923 48.4
CARHR207600 Cardamine hirsuta HOM05D005539 ORTHO05D006644 7.3e-218 761.5 926 46.1
Aa31LG11G6690 Aethionema arabicum HOM05D005539 ORTHO05D006644 4.6e-212 742.3 872 47.1
Ah.04g164520 Amaranthus hybridus HOM05D005539 ORTHO05D006644 1.9e-210 736.9 926 46.3
vmacro10051 Vaccinium macrocarpon HOM05D005539 ORTHO05D006644 3.6e-209 732.6 920 47.2
BcaB05g21701 Brassica carinata HOM05D005539 ORTHO05D006644 1.3e-203 714.1 875 45.8
Hma1.2p1_0703F.1_g206540 Hydrangea macrophylla HOM05D005539 ORTHO05D006644 1.9e-197 693.7 599 59.4
unitig_0.g238 Utricularia gibba HOM05D005539 ORTHO05D006644 1.6e-196 690.6 899 43.9
Cfa001325 Carpinus fangiana HOM05D005539 ORTHO05D006644 2.4e-192 676.8 698 52.4
BcaC06g32273 Brassica carinata HOM05D005539 ORTHO05D006644 5.8e-191 672.2 848 44.5
FAN06G2075 Fragaria x ananassa HOM05D005539 ORTHO05D006644 4.9e-190 669.1 705 52.8
FAN10G4325 Fragaria x ananassa HOM05D005539 ORTHO05D006644 4.9e-190 669.1 705 52.8
FAN06G5029 Fragaria x ananassa HOM05D005539 ORTHO05D006644 3.9e-187 659.4 692 52.5
ATR0193G007 Amborella trichopoda HOM05D005539 ORTHO05D006644 1.7e-182 644.0 803 45.6
TPR.G2533 Trifolium pratense HOM05D005539 ORTHO05D006644 1.8e-176 624.0 702 49.9
BcaC06g32275 Brassica carinata HOM05D005539 ORTHO05D006644 1.0e-171 608.2 708 48.0
HPP92_019887 Vanilla planifolia HOM05D005539 ORTHO05D006644 1.2e-164 584.7 889 39.7
Os04g0608400 Oryza sativa ssp. japonica HOM05D005539 ORTHO05D006644 6.7e-163 578.9 853 40.6
Zm00001eb430560 Zea mays HOM05D005539 ORTHO05D006644 3.7e-153 546.6 807 40.9
Dinv17987 Davidia involucrata HOM05D005539 ORTHO05D006644 1.3e-142 511.5 424 59.2
Solyc11g020190.1 Solanum lycopersicum HOM05D005539 ORTHO05D006644 1.0e-139 501.9 575 49.9
BraA10t45109Z Brassica rapa HOM05D005539 ORTHO05D006644 2.9e-134 483.8 630 44.9
Nitab4.5_0003886g0070 Nicotiana tabacum HOM05D005539 ORTHO05D006644 2.6e-122 444.1 363 60.1
Nitab4.5_0001171g0020 Nicotiana tabacum HOM05D005539 ORTHO05D006644 5.7e-122 443.0 366 59.6
CDE04G1676 Ceratophyllum demersum HOM05D005539 ORTHO05D006644 4.1e-120 436.8 636 41.4
SHI03446 Sapria himalayana HOM05D005539 ORTHO05D006644 2.0e-119 434.5 476 51.1
QL08p063092 Quercus lobata HOM05D005539 ORTHO05D006644 5.0e-118 429.9 314 63.4
Dinv17986 Davidia involucrata HOM05D005539 ORTHO05D006644 7.5e-114 416.0 479 51.1
Mapoly0043s0044 Marchantia polymorpha HOM05D005539 ORTHO05D006644 1.4e-112 411.8 699 35.6
Solyc11g008120.3 Solanum lycopersicum HOM05D005539 ORTHO05D006644 2.0e-111 407.9 478 49.8
AagrBONN_evm.TU.Sc2ySwM_362.2924 Anthoceros agrestis HOM05D005539 ORTHO05D006644 4.0e-107 393.7 700 36.0
Pp3c6_24520 Physcomitrium patens HOM05D005539 ORTHO05D006644 3.3e-101 374.0 682 34.6
HanXRQChr13g0392111 Helianthus annuus HOM05D005539 ORTHO05D006644 1.3e-81 308.9 562 38.4
Nitab4.5_0000395g0010 Nicotiana tabacum HOM05D005539 ORTHO05D006644 5.1e-78 297.0 297 53.5
SEGI_35888 Sequoiadendron giganteum HOM05D005539 ORTHO05D006644 8.7e-78 296.2 540 35.0
Glyma.18G028167 Glycine max HOM05D005539 ORTHO05D006644 6.4e-73 280.0 230 57.4
Glyma.18G028233 Glycine max HOM05D005539 ORTHO05D006644 6.0e-71 273.5 283 53.7
Solyc11g008110.1 Solanum lycopersicum HOM05D005539 ORTHO05D006644 7.9e-71 273.1 183 67.8
CBR_g22013 Chara braunii HOM05D005539 ORTHO05D006644 1.1e-64 252.7 769 27.4
SEGI_27471 Sequoiadendron giganteum HOM05D005539 ORTHO05D006644 3.0e-62 244.6 304 42.8
SEGI_33727 Sequoiadendron giganteum HOM05D005539 ORTHO05D006644 5.1e-62 243.8 320 41.9
vmacro22159 Vaccinium macrocarpon HOM05D005539 ORTHO05D006644 5.6e-61 240.4 388 42.3
FAN06G2580 Fragaria x ananassa HOM05D005539 ORTHO05D006644 7.4e-53 213.4 217 51.2
Solyc11g020180.3 Solanum lycopersicum HOM05D005539 ORTHO05D006644 4.8e-52 210.7 144 68.1
CDE04G3215 Ceratophyllum demersum HOM05D005539 ORTHO05D006644 1.4e-51 209.1 218 47.7
MD07G1220900 Malus domestica HOM05D005539 ORTHO05D006644 2.8e-44 184.9 190 52.6
Hma1.2p1_0703F.1_g206520 Hydrangea macrophylla HOM05D005539 ORTHO05D006644 6.9e-43 180.3 180 50.0
Nitab4.5_0001171g0030 Nicotiana tabacum HOM05D005539 ORTHO05D006644 3.1e-35 154.8 247 40.9
SEGI_03850 Sequoiadendron giganteum HOM05D005539 ORTHO05D006644 1.3e-33 149.4 211 39.3
Nitab4.5_0003886g0090 Nicotiana tabacum HOM05D005539 ORTHO05D006644 3.8e-33 147.9 247 39.7
Solyc11g020160.2 Solanum lycopersicum HOM05D005539 ORTHO05D006644 3.2e-32 144.8 127 55.1
HPP92_019878 Vanilla planifolia HOM05D005539 ORTHO05D006644 2.6e-29 135.2 311 31.8
Sabra08G0049700 Salix brachista HOM05D005539 ORTHO05D006644 2.8e-28 131.7 318 34.0
MD07G1221200 Malus domestica HOM05D005539 ORTHO05D006644 1.2e-21 109.8 118 50.8
MCO09G726 Micromonas commoda HOM05D005539 ORTHO05D006644 4.4e-21 107.8 785 22.8
SHI03444 Sapria himalayana HOM05D000002 ORTHO05D000001 3.0e-14 85.1 85 40.0
Solyc11g020170.1 Solanum lycopersicum HOM05D005539 ORTHO05D006644 2.3e-09 68.9 44 68.2
C03p17190 Brassica napus HOM05D001640 ORTHO05D001612 1.5e-08 66.2 84 42.9
BolC3t14133H Brassica oleracea HOM05D001640 ORTHO05D001612 4.7e-07 61.2 106 34.9


User provided reference genes

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