Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold75G25026 Striga asiatica HOM05D005544 ORTHO05D007303 1.2e-71 273.1 137 100.0
SGA_v2.0_scaffold172G39056 Striga asiatica HOM05D005544 ORTHO05D007303 7.6e-55 217.2 128 85.9
Oeu047906.1 Olea europaea HOM05D005544 ORTHO05D007303 1.2e-44 183.3 129 73.6
unitig_22.g6695 Utricularia gibba HOM05D005544 ORTHO05D007303 1.0e-43 180.3 128 68.8
SalBow2G1504 Salvia bowleyana HOM05D005544 ORTHO05D007303 2.2e-41 172.6 133 66.9
CSS0033644 Camellia sinensis var. sinensis HOM05D005544 ORTHO05D007303 2.0e-31 139.4 126 57.1
Peaxi162Scf00017g00211 Petunia axillaris HOM05D005544 ORTHO05D007303 2.0e-31 139.4 129 56.6
Migut.N02122 Erythranthe guttata HOM05D005544 ORTHO05D007303 3.5e-31 138.7 133 58.6
SalBow3G0398 Salvia bowleyana HOM05D005544 ORTHO05D002055 5.9e-31 137.9 100 69.0
Nitab4.5_0001651g0120 Nicotiana tabacum HOM05D005544 ORTHO05D007303 1.3e-30 136.7 129 57.4
Nitab4.5_0009496g0010 Nicotiana tabacum HOM05D005544 ORTHO05D007303 2.2e-30 136.0 129 56.6
SGA_v2.0_scaffold419G51287 Striga asiatica HOM05D005544 ORTHO05D007303 2.9e-30 135.6 91 79.1
Cc01_g20090 Coffea canephora HOM05D005544 ORTHO05D007303 5.0e-30 134.8 129 57.4
Sopen05g006280 Solanum pennellii HOM05D005544 ORTHO05D007303 1.4e-29 133.3 129 57.4
PGSC0003DMG400043560 Solanum tuberosum HOM05D005544 ORTHO05D007303 2.5e-29 132.5 129 56.6
Migut.O00595 Erythranthe guttata HOM05D005544 ORTHO05D007303 4.2e-29 131.7 133 56.4
SGA_v2.0_scaffold175G39332 Striga asiatica HOM05D005544 ORTHO05D007303 5.5e-29 131.3 93 74.2
Nitab4.5_0015534g0010 Nicotiana tabacum HOM05D005544 ORTHO05D007303 9.4e-29 130.6 129 55.8
Actinidia00706 Actinidia chinensis HOM05D005544 ORTHO05D007303 8.0e-28 127.5 126 54.8
SGA_v2.0_scaffold45G17255 Striga asiatica HOM05D005544 ORTHO05D007303 2.3e-27 125.9 91 73.6
Solyc05g010470.4 Solanum lycopersicum HOM05D005544 ORTHO05D007303 6.7e-27 124.4 108 60.2
Hma1.2p1_0358F.1_g134770 Hydrangea macrophylla HOM05D005544 ORTHO05D007303 8.8e-27 124.0 134 51.5
Hma1.2p1_0358F.1_g134780 Hydrangea macrophylla HOM05D005544 ORTHO05D007303 8.8e-27 124.0 134 51.5
DCAR_018371 Daucus carota HOM05D005544 ORTHO05D007303 2.0e-26 122.9 128 52.3
Dinv11286 Davidia involucrata HOM05D005544 ORTHO05D007303 3.3e-26 122.1 122 52.5
Lsat_1_v5_gn_5_189761 Lactuca sativa HOM05D005544 ORTHO05D007303 7.4e-26 120.9 126 50.8
Sabra14G0102000 Salix brachista HOM05D005544 ORTHO05D007303 8.2e-25 117.5 140 47.1
Lj1C40T13 Lonicera japonica HOM05D005544 ORTHO05D007303 1.1e-24 117.1 114 51.8
HanXRQChr11g0334851 Helianthus annuus HOM05D005544 ORTHO05D007303 1.8e-24 116.3 140 47.9
CAN.G184.38 Capsicum annuum HOM05D005544 ORTHO05D007303 1.6e-23 113.2 104 54.8
ECA248G0063 Erigeron canadensis HOM05D005544 ORTHO05D007303 2.6e-23 112.5 133 47.4
Potri.002G213500 Populus trichocarpa HOM05D005544 ORTHO05D007303 2.6e-23 112.5 113 53.1
Rhsim13G0018400 Rhododendron simsii HOM05D005544 ORTHO05D007303 2.6e-23 112.5 129 51.9
QL12p023600 Quercus lobata HOM05D005544 ORTHO05D007303 3.5e-23 112.1 143 43.4
Lalb_Chr02g0143021 Lupinus albus HOM05D005544 ORTHO05D007303 5.9e-23 111.3 139 44.6
QL05p077001 Quercus lobata HOM05D005544 ORTHO05D007303 5.9e-23 111.3 143 42.7
QL12p023649 Quercus lobata HOM05D005544 ORTHO05D007303 5.9e-23 111.3 143 42.7
Ciclev10019671m.g Citrus clementina HOM05D005544 ORTHO05D007303 7.7e-23 110.9 143 44.1
CiPaw.07G098400 Carya illinoinensis HOM05D005544 ORTHO05D007303 2.2e-22 109.4 141 42.6
Glyma.10G022600 Glycine max HOM05D005544 ORTHO05D007303 5.0e-22 108.2 142 43.0
Potri.014G135600 Populus trichocarpa HOM05D005544 ORTHO05D007303 5.0e-22 108.2 139 47.5
PGR044G1528 Punica granatum HOM05D005544 ORTHO05D007303 5.0e-22 108.2 136 45.6
PGR088G0006 Punica granatum HOM05D005544 ORTHO05D007303 5.0e-22 108.2 136 45.6
BcaB01g05978 Brassica carinata HOM05D005544 ORTHO05D007303 6.5e-22 107.8 143 45.5
C03p02930 Brassica napus HOM05D005544 ORTHO05D007303 6.5e-22 107.8 143 45.5
TWI59G1451 Tripterygium wilfordii HOM05D005544 ORTHO05D007303 6.5e-22 107.8 141 45.4
QL02p074655 Quercus lobata HOM05D005544 ORTHO05D007303 8.5e-22 107.5 143 42.0
vmacro02516 Vaccinium macrocarpon HOM05D005544 ORTHO05D007303 8.5e-22 107.5 129 49.6
VMungo0720G2755 Vigna mungo HOM05D005544 ORTHO05D007303 8.5e-22 107.5 143 42.7
BolC3t12848H Brassica oleracea HOM05D005544 ORTHO05D007303 1.1e-21 107.1 143 45.5
MD03G1274200 Malus domestica HOM05D005544 ORTHO05D007303 1.5e-21 106.7 127 45.7
Cfa004766 Carpinus fangiana HOM05D005544 ORTHO05D007303 3.2e-21 105.5 138 42.8
Ca_10382_v3 Cicer arietinum L. HOM05D005544 ORTHO05D007303 3.2e-21 105.5 111 45.9
Ca_29660_v3 Cicer arietinum L. HOM05D005544 ORTHO05D007303 3.2e-21 105.5 111 45.9
COL.COLO4_08045 Corchorus olitorius HOM05D005544 ORTHO05D007303 3.2e-21 105.5 145 43.4
Glyma.02G151500 Glycine max HOM05D005544 ORTHO05D007303 3.2e-21 105.5 142 41.5
Lj5g0002288 Lotus japonicus HOM05D005544 ORTHO05D007303 3.2e-21 105.5 139 43.9
A03p02590 Brassica napus HOM05D005544 ORTHO05D007303 4.2e-21 105.1 140 46.4
BraA03t09620Z Brassica rapa HOM05D005544 ORTHO05D007303 4.2e-21 105.1 140 46.4
Manes.02G181800 Manihot esculenta HOM05D005544 ORTHO05D007303 4.2e-21 105.1 141 47.5
Aqoxy2G03155 Aquilegia oxysepala HOM05D005544 ORTHO05D007303 5.5e-21 104.8 133 42.9
MD11G1296600 Malus domestica HOM05D005544 ORTHO05D007303 5.5e-21 104.8 127 44.9
Phvul.007G167300 Phaseolus vulgaris HOM05D005544 ORTHO05D007303 5.5e-21 104.8 108 50.0
Thhalv10001392m.g Eutrema salsugineum HOM05D005544 ORTHO05D007303 7.2e-21 104.4 143 44.8
Sp4g29910 Schrenkiella parvula HOM05D005544 ORTHO05D007303 9.4e-21 104.0 143 44.8
THA.LOC104802213 Tarenaya hassleriana HOM05D005544 ORTHO05D007303 9.4e-21 104.0 128 49.2
Cpa.g.sc9.148 Carica papaya HOM05D005544 ORTHO05D007303 1.2e-20 103.6 140 42.9
Haze_10363 Corylus avellana HOM05D005544 ORTHO05D007303 1.2e-20 103.6 138 42.8
Gohir.D08G054000 Gossypium hirsutum HOM05D005544 ORTHO05D007303 1.2e-20 103.6 144 45.8
Gorai.004G054300 Gossypium raimondii HOM05D005544 ORTHO05D007303 1.2e-20 103.6 144 45.8
Medtr1g089260 Medicago truncatula HOM05D005544 ORTHO05D007303 1.2e-20 103.6 128 46.1
Prupe.1G201800 Prunus persica HOM05D005544 ORTHO05D007303 1.2e-20 103.6 126 43.7
RcHm_v2.0_Chr7g0215731 Rosa chinensis HOM05D005544 ORTHO05D007303 1.6e-20 103.2 143 40.6
MELO3C015885.2 Cucumis melo HOM05D005544 ORTHO05D007303 2.1e-20 102.8 143 42.0
Duzib211G0556 Durio zibethinus HOM05D005544 ORTHO05D007303 2.1e-20 102.8 145 45.5
Gohir.A08G044300 Gossypium hirsutum HOM05D005544 ORTHO05D007303 2.7e-20 102.4 144 44.4
CDE07G0705 Ceratophyllum demersum HOM05D005544 ORTHO05D007303 3.6e-20 102.1 141 42.6
CsaV3_7G028370 Cucumis sativus L. HOM05D005544 ORTHO05D007303 3.6e-20 102.1 143 40.6
FAN08G3375 Fragaria x ananassa HOM05D005544 ORTHO05D007303 4.7e-20 101.7 143 39.2
HPP92_015604 Vanilla planifolia HOM05D005544 ORTHO05D007303 4.7e-20 101.7 115 48.7
CANSAT25G0498 Cannabis sativa HOM05D005544 ORTHO05D007303 1.0e-19 100.5 141 41.1
Aa31LG1G29410 Aethionema arabicum HOM05D005544 ORTHO05D007303 1.8e-19 99.8 143 43.4
CARHR143370 Cardamine hirsuta HOM05D005544 ORTHO05D007303 1.8e-19 99.8 143 44.1
Thecc.01G288500 Theobroma cacao HOM05D005544 ORTHO05D007303 1.8e-19 99.8 145 42.8
FAN13G2222 Fragaria x ananassa HOM05D005544 ORTHO05D007303 2.3e-19 99.4 143 38.5
Ah.09g228790 Amaranthus hybridus HOM05D005544 ORTHO05D007303 3.0e-19 99.0 129 45.0
AT2G47990 Arabidopsis thaliana HOM05D005544 ORTHO05D007303 6.8e-19 97.8 143 42.7
Atru.chr5.1295 Acer truncatum HOM05D005544 ORTHO05D007303 8.8e-19 97.4 137 41.6
EL10Ac2g03124 Beta vulgaris HOM05D005544 ORTHO05D007303 2.6e-18 95.9 130 41.5
AUR62042230 Chenopodium quinoa HOM05D005544 ORTHO05D007303 2.6e-18 95.9 127 44.1
FvH4_5g25500 Fragaria vesca HOM05D005544 ORTHO05D007303 3.4e-18 95.5 145 40.0
FAN18G1194 Fragaria x ananassa HOM05D005544 ORTHO05D007303 3.4e-18 95.5 145 40.0
Nn4g24755 Nelumbo nucifera HOM05D005544 ORTHO05D007303 4.4e-18 95.1 136 39.7
BcaB02g08729 Brassica carinata HOM05D005544 ORTHO05D007303 7.5e-18 94.4 140 43.6
TPR.G16943 Trifolium pratense HOM05D005544 ORTHO05D007303 1.3e-17 93.6 140 40.0
Carub.0004s3071 Capsella rubella HOM05D005544 ORTHO05D007303 1.7e-17 93.2 143 42.0
AUR62037787 Chenopodium quinoa HOM05D005544 ORTHO05D007303 1.7e-17 93.2 127 43.3
TAR362G0205 Trochodendron aralioides HOM05D005544 ORTHO05D007303 1.7e-17 93.2 118 44.9
AL4G47580 Arabidopsis lyrata HOM05D005544 ORTHO05D007303 2.2e-17 92.8 143 41.3
Nn3g18705 Nelumbo nucifera HOM05D005544 ORTHO05D007303 3.7e-17 92.0 118 43.2
PSO675G2029 Papaver somniferum HOM05D005544 ORTHO05D007303 3.7e-17 92.0 138 40.6
Sed0004995 Sechium edule HOM05D005544 ORTHO05D007303 8.3e-17 90.9 141 36.9
PSO541G2439 Papaver somniferum HOM05D005544 ORTHO05D007303 1.4e-16 90.1 137 40.1
GSVIVG01011022001 Vitis vinifera HOM05D005544 ORTHO05D007303 1.8e-16 89.7 125 41.6
Actinidia24289 Actinidia chinensis HOM05D005544 ORTHO05D007303 7.0e-16 87.8 126 42.9
Sc17g0005190 Simmondsia chinensis HOM05D005544 ORTHO05D007303 9.1e-16 87.4 136 44.1
Sc17g0005180 Simmondsia chinensis HOM05D005544 ORTHO05D007303 2.0e-15 86.3 136 43.4
ATR0691G265 Amborella trichopoda HOM05D005544 ORTHO05D007303 2.7e-15 85.9 130 43.8
QL12p023632 Quercus lobata HOM05D005544 ORTHO05D007303 7.7e-15 84.3 113 42.5
Mapoly0066s0060 Marchantia polymorpha HOM05D005544 ORTHO05D007303 1.1e-13 80.5 132 38.6
SHI20711 Sapria himalayana HOM05D005544 ORTHO05D007303 1.1e-13 80.5 127 40.9
Psat6g168560 Pisum sativum HOM05D005544 ORTHO05D007303 3.7e-09 65.5 64 51.6
SMO119G0317 Selaginella moellendorffii HOM05D005544 ORTHO05D007303 4.5e-07 58.5 111 36.9
Nn3g19125 Nelumbo nucifera HOM05D005544 ORTHO05D007303 5.9e-07 58.2 58 53.4


User provided reference genes

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