Gene: PGSC0003DMG400043560

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400043560
  • Transcript Identifier PGSC0003DMT400093989
  • Gene Type Coding gene
  • Location ST4.03ch05 : 1244512-1246113 : positive

Gene Family Information

  • ID HOM05D005544
  • #Genes/#Species 138/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37445273
  • id PGSC0003DMG400043560.v4.03
  • uniprot M1DT54

Descriptions

  • Description U3 small nucleolar RNA-associated protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006364
IBA
IEA
GOA DatabaserRNA processing
GO:0006364
IEA
InterProrRNA processing
GO:0045943
IBA
GOA Databasepositive regulation of transcription by RNA polymerase I
GO:0009561
ISO
PLAZA Integrative Orthologymegagametogenesis AT2G47990
GO:0009553
ISO
PLAZA Integrative Orthologyembryo sac development AT2G47990

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT2G47990

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005730
IBA
IEA
GOA Databasenucleolus
GO:0005730
IEA
InterPronucleolus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR018983 U3 small nucleolar RNA-associated protein 15, C-terminal
IPR001680 WD40 repeat
IPR036322 WD40-repeat-containing domain superfamily
IPR020472 G-protein beta WD-40 repeat
Mapman id Description
17.1.3.2.1.2.3 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU processome.pre-40S ribosomal subunit nuclear assembly.UtpA module.assembly factor (SWA1)