Gene: Sc17g0005180

General Information

Structural Information

Species Simmondsia chinensis
Gene Identifier Sc17g0005180
Transcript Identifier Sc17g0005180.01
Gene Type Coding gene
Location GWHAASQ00000017 : 27504996-27507663 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D005544
#Genes/#Species 138/93
Phylogenetic origin

ID ORTHO05D007303
#Genes/#Species 132/93
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

tid Sc17g0005180.01

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009561	ISO	PLAZA Integrative Orthology	megagametogenesis	AT2G47990
GO:0009553	ISO	PLAZA Integrative Orthology	embryo sac development	AT2G47990
GO:0006364	ISO	PLAZA Integrative Orthology	rRNA processing	AT2G47990

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding
GO:0003729	ISO	PLAZA Integrative Orthology	mRNA binding	AT2G47990

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005730	ISO	PLAZA Integrative Orthology	nucleolus	AT2G47990

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR036322	WD40-repeat-containing domain superfamily
IPR001680	WD40 repeat
IPR015943	WD40/YVTN repeat-like-containing domain superfamily
IPR009060	UBA-like superfamily
IPR020472	G-protein beta WD-40 repeat
IPR009719	GBF-interacting protein 1, N-terminal

Mapman id	Description
17.1.3.2.1.2.3	Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU processome.pre-40S ribosomal subunit nuclear assembly.UtpA module.assembly factor (SWA1)