Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold6G03478 Striga asiatica HOM05D005980 ORTHO05D007618 5.5e-74 280.8 134 100.0
SGA_v2.0_scaffold230G43391 Striga asiatica HOM05D005980 ORTHO05D007618 1.3e-67 259.6 136 91.9
SGA_v2.0_scaffold51G18642 Striga asiatica HOM05D005980 ORTHO05D007618 6.3e-62 240.7 125 92.8
CSS0019737 Camellia sinensis var. sinensis HOM05D005980 ORTHO05D007618 9.4e-58 226.9 125 84.0
CSS0007144 Camellia sinensis var. sinensis HOM05D005980 ORTHO05D007618 1.6e-57 226.1 125 83.2
Nitab4.5_0000869g0050 Nicotiana tabacum HOM05D005980 ORTHO05D007618 1.6e-57 226.1 125 86.4
PGSC0003DMG402021097 Solanum tuberosum HOM05D005980 ORTHO05D007618 2.1e-57 225.7 125 85.6
DCAR_003883 Daucus carota HOM05D005980 ORTHO05D007618 2.7e-57 225.3 125 85.6
GSVIVG01021555001 Vitis vinifera HOM05D005980 ORTHO05D007618 3.6e-57 224.9 125 84.0
Cc09_g08730 Coffea canephora HOM05D005980 ORTHO05D007618 4.7e-57 224.6 125 84.8
Peaxi162Scf00670g00346 Petunia axillaris HOM05D005980 ORTHO05D007618 4.7e-57 224.6 125 86.4
Solyc02g070390.3 Solanum lycopersicum HOM05D005980 ORTHO05D007618 4.7e-57 224.6 125 84.8
Sopen02g019470 Solanum pennellii HOM05D005980 ORTHO05D007618 4.7e-57 224.6 125 84.8
Ca_00513_v3 Cicer arietinum L. HOM05D005980 ORTHO05D007618 8.0e-57 223.8 125 84.8
Thecc.06G143900 Theobroma cacao HOM05D005980 ORTHO05D007618 8.0e-57 223.8 125 84.0
Ciclev10014878m.g Citrus clementina HOM05D005980 ORTHO05D007618 1.0e-56 223.4 125 82.4
COL.COLO4_31005 Corchorus olitorius HOM05D005980 ORTHO05D007618 1.4e-56 223.0 125 83.2
Sabra16G0236200 Salix brachista HOM05D005980 ORTHO05D007618 1.8e-56 222.6 125 84.0
Hma1.2p1_0586F.1_g183830 Hydrangea macrophylla HOM05D005980 ORTHO05D007618 2.3e-56 222.2 125 81.6
VMungo0540G0170 Vigna mungo HOM05D005980 ORTHO05D007618 2.3e-56 222.2 125 83.2
Lj1A1168T68 Lonicera japonica HOM05D005980 ORTHO05D007618 3.0e-56 221.9 125 81.6
Psat1g191560 Pisum sativum HOM05D005980 ORTHO05D007618 4.0e-56 221.5 125 84.0
QL05p054997 Quercus lobata HOM05D005980 ORTHO05D007618 4.0e-56 221.5 125 81.6
Eucgr.D00262 Eucalyptus grandis HOM05D005980 ORTHO05D007618 5.2e-56 221.1 125 81.6
Gorai.009G152600 Gossypium raimondii HOM05D005980 ORTHO05D007618 6.8e-56 220.7 125 83.2
Sc05g0005970 Simmondsia chinensis HOM05D005980 ORTHO05D007618 6.8e-56 220.7 125 84.0
Glyma.13G221300 Glycine max HOM05D005980 ORTHO05D007618 8.8e-56 220.3 125 82.4
Dinv32210 Davidia involucrata HOM05D005980 ORTHO05D007618 1.2e-55 219.9 125 81.6
Oeu032723.1 Olea europaea HOM05D005980 ORTHO05D007618 1.2e-55 219.9 125 82.4
Actinidia13438 Actinidia chinensis HOM05D005980 ORTHO05D007618 1.5e-55 219.5 125 80.8
Gohir.D05G148400 Gossypium hirsutum HOM05D005980 ORTHO05D007618 1.5e-55 219.5 125 82.4
MSTRG.16268 Avicennia marina HOM05D005980 ORTHO05D007618 2.6e-55 218.8 125 80.0
PGR102G3344 Punica granatum HOM05D005980 ORTHO05D007618 2.6e-55 218.8 125 80.0
Aqoxy4G00005 Aquilegia oxysepala HOM05D005980 ORTHO05D007618 3.4e-55 218.4 125 81.6
CiPaw.09G119300 Carya illinoinensis HOM05D005980 ORTHO05D007618 3.4e-55 218.4 125 81.6
AUR62028384 Chenopodium quinoa HOM05D005980 ORTHO05D007618 3.4e-55 218.4 125 82.4
Manes.15G125300 Manihot esculenta HOM05D005980 ORTHO05D007618 3.4e-55 218.4 125 80.8
Phvul.006G168100 Phaseolus vulgaris HOM05D005980 ORTHO05D007618 3.4e-55 218.4 124 82.3
RcHm_v2.0_Chr5g0014971 Rosa chinensis HOM05D005980 ORTHO05D007618 3.4e-55 218.4 125 80.8
Ah.12g059810 Amaranthus hybridus HOM05D005980 ORTHO05D007618 4.4e-55 218.0 125 83.2
SalBow8G1809 Salvia bowleyana HOM05D005980 ORTHO05D007618 4.4e-55 218.0 125 80.8
AUR62025366 Chenopodium quinoa HOM05D005980 ORTHO05D007618 5.7e-55 217.6 125 82.4
FAN16G3332 Fragaria x ananassa HOM05D005980 ORTHO05D007618 5.7e-55 217.6 125 81.6
Migut.M01863 Erythranthe guttata HOM05D005980 ORTHO05D007618 7.5e-55 217.2 126 82.5
Gohir.A05G146100 Gossypium hirsutum HOM05D005980 ORTHO05D007618 7.5e-55 217.2 121 83.5
Aa31LG10G6710 Aethionema arabicum HOM05D005980 ORTHO05D007618 9.8e-55 216.9 125 80.0
Potri.001G358400 Populus trichocarpa HOM05D005980 ORTHO05D007618 9.8e-55 216.9 125 80.0
EL10Ac1g01827 Beta vulgaris HOM05D005980 ORTHO05D007618 1.3e-54 216.5 125 81.6
TPR.G26225 Trifolium pratense HOM05D005980 ORTHO05D007618 1.7e-54 216.1 125 80.8
Cpa.g.sc17.56 Carica papaya HOM05D005980 ORTHO05D007618 2.2e-54 215.7 120 83.3
Haze_05690 Corylus avellana HOM05D005980 ORTHO05D007618 2.8e-54 215.3 120 81.7
FAN21G1725 Fragaria x ananassa HOM05D005980 ORTHO05D007618 2.8e-54 215.3 125 80.8
Medtr2g018740 Medicago truncatula HOM05D005980 ORTHO05D007618 2.8e-54 215.3 125 80.0
AT2G34640 Arabidopsis thaliana HOM05D005980 ORTHO05D007618 3.7e-54 214.9 121 82.6
Dinv21517 Davidia involucrata HOM05D005980 ORTHO05D007618 3.7e-54 214.9 125 78.4
FvH4_3g05000 Fragaria vesca HOM05D005980 ORTHO05D007618 3.7e-54 214.9 125 80.0
FAN11G3650 Fragaria x ananassa HOM05D005980 ORTHO05D007618 3.7e-54 214.9 125 80.0
Prupe.4G086000 Prunus persica HOM05D005980 ORTHO05D007618 4.8e-54 214.5 125 80.0
TAR626G0855 Trochodendron aralioides HOM05D005980 ORTHO05D007618 4.8e-54 214.5 125 79.2
CARHR128740 Cardamine hirsuta HOM05D005980 ORTHO05D007618 6.3e-54 214.2 121 81.8
PSO675G5271 Papaver somniferum HOM05D005980 ORTHO05D007618 6.3e-54 214.2 125 80.0
arahy.Tifrunner.gnm1.ann1.PI6078 Arachis hypogaea HOM05D005980 ORTHO05D007618 8.3e-54 213.8 120 81.7
FAN25G0178 Fragaria x ananassa HOM05D005980 ORTHO05D007618 8.3e-54 213.8 120 82.5
Carub.0004s1633 Capsella rubella HOM05D005980 ORTHO05D007618 1.1e-53 213.4 121 81.8
vmacro03427 Vaccinium macrocarpon HOM05D005980 ORTHO05D007618 1.1e-53 213.4 125 78.4
arahy.Tifrunner.gnm1.ann1.G1ZF0U Arachis hypogaea HOM05D005980 ORTHO05D007618 1.4e-53 213.0 120 81.7
CANSAT35G0447 Cannabis sativa HOM05D005980 ORTHO05D007618 1.4e-53 213.0 121 83.5
Thhalv10016502m.g Eutrema salsugineum HOM05D005980 ORTHO05D007618 1.4e-53 213.0 121 81.0
AL4G30630 Arabidopsis lyrata HOM05D005980 ORTHO05D007618 1.8e-53 212.6 121 81.8
TWI73G1267 Tripterygium wilfordii HOM05D005980 ORTHO05D007618 1.8e-53 212.6 124 79.0
ClCG01G024920 Citrullus lanatus HOM05D005980 ORTHO05D007618 2.4e-53 212.2 125 77.6
Lj2C323G3 Lonicera japonica HOM05D005980 ORTHO05D007618 2.4e-53 212.2 125 77.6
Lalb_Chr18g0055171 Lupinus albus HOM05D005980 ORTHO05D007618 2.4e-53 212.2 124 79.8
Nn3g20318 Nelumbo nucifera HOM05D005980 ORTHO05D007618 2.4e-53 212.2 124 80.6
MD10G1257800 Malus domestica HOM05D005980 ORTHO05D007618 3.1e-53 211.8 125 79.2
PSO541G1780 Papaver somniferum HOM05D005980 ORTHO05D007618 4.1e-53 211.5 125 79.2
Sp4g16910 Schrenkiella parvula HOM05D005980 ORTHO05D007618 5.4e-53 211.1 121 81.0
Sed0012577 Sechium edule HOM05D005980 ORTHO05D007618 5.4e-53 211.1 125 77.6
BcaNung07262 Brassica carinata HOM05D005980 ORTHO05D007618 7.0e-53 210.7 121 81.0
A05p11020 Brassica napus HOM05D005980 ORTHO05D007618 7.0e-53 210.7 121 81.0
BraA05t20047Z Brassica rapa HOM05D005980 ORTHO05D007618 7.0e-53 210.7 121 81.0
MELO3C007103.2 Cucumis melo HOM05D005980 ORTHO05D007618 7.0e-53 210.7 125 76.8
Lj6g0019056 Lotus japonicus HOM05D005980 ORTHO05D007618 9.1e-53 210.3 125 79.2
THA.LOC104820671 Tarenaya hassleriana HOM05D005980 ORTHO05D007618 9.1e-53 210.3 121 81.8
CsaV3_6G052070 Cucumis sativus L. HOM05D005980 ORTHO05D007618 2.0e-52 209.1 125 76.0
BcaC02g11540 Brassica carinata HOM05D005980 ORTHO05D007618 2.7e-52 208.8 121 81.0
C04p14140 Brassica napus HOM05D005980 ORTHO05D007618 2.7e-52 208.8 121 81.0
BolC4t23002H Brassica oleracea HOM05D005980 ORTHO05D007618 2.7e-52 208.8 121 81.0
Sed0023515 Sechium edule HOM05D005980 ORTHO05D007618 4.5e-52 208.0 125 76.8
ATR1098G083 Amborella trichopoda HOM05D005980 ORTHO05D007618 3.8e-51 204.9 125 76.0
HanXRQChr10g0301191 Helianthus annuus HOM05D005980 ORTHO05D007618 3.8e-51 204.9 120 79.2
Rhsim13G0118300 Rhododendron simsii HOM05D005980 ORTHO05D007618 3.8e-51 204.9 122 78.7
Lsat_1_v5_gn_9_33800 Lactuca sativa HOM05D005980 ORTHO05D007618 8.5e-51 203.8 120 80.0
Zm00001eb152010 Zea mays HOM05D005980 ORTHO05D007618 2.5e-50 202.2 121 80.2
ECA247G3302 Erigeron canadensis HOM05D005980 ORTHO05D007618 1.2e-49 199.9 120 77.5
Os01g0769900 Oryza sativa ssp. japonica HOM05D005980 ORTHO05D007618 6.1e-49 197.6 121 77.7
Nitab4.5_0005963g0020 Nicotiana tabacum HOM05D005980 ORTHO05D007618 5.0e-43 177.9 98 87.8
arahy.Tifrunner.gnm1.ann1.D5DAI6 Arachis hypogaea HOM05D005980 ORTHO05D007618 7.2e-42 174.1 164 54.3
Mapoly0061s0053 Marchantia polymorpha HOM05D005980 ORTHO05D007618 8.0e-41 170.6 124 60.5
AagrBONN_evm.TU.Sc2ySwM_228.94 Anthoceros agrestis HOM05D005980 ORTHO05D007618 2.0e-39 166.0 123 59.3
unitig_578.g16128 Utricularia gibba HOM05D005980 ORTHO05D007618 6.2e-33 144.4 79 83.5
Pp3c10_12300 Physcomitrium patens HOM05D005980 ORTHO05D007618 6.8e-32 141.0 119 57.1
Pp3c3_26950 Physcomitrium patens HOM05D005980 ORTHO05D007618 2.2e-30 136.0 119 53.8
MD05G1278800 Malus domestica HOM05D005980 ORTHO05D007618 9.2e-29 130.6 77 79.2
HPP92_001893 Vanilla planifolia HOM05D005980 ORTHO05D007618 2.3e-24 115.9 62 83.9
CBR_g48045 Chara braunii HOM05D005980 ORTHO05D007618 9.5e-18 94.0 124 37.9
HPP92_001892 Vanilla planifolia HOM05D005980 ORTHO05D007618 9.5e-18 94.0 56 78.6
Hma1.2p1_0581F.1_g182930 Hydrangea macrophylla HOM05D005980 ORTHO05D007618 3.7e-14 82.0 43 81.4
arahy.Tifrunner.gnm1.ann1.MPA65D Arachis hypogaea HOM05D005980 ORTHO05D007618 5.6e-10 68.2 33 84.8
Lsat_1_v5_gn_7_71901 Lactuca sativa HOM05D002457 ORTHO05D005750 6.2e-09 64.7 50 62.0


User provided reference genes

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