Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold66G22316 Striga asiatica HOM05D004558 ORTHO05D005647 1.1e-234 816.2 406 100.0
Cpa.g.sc92.57 Carica papaya HOM05D004558 ORTHO05D005647 1.9e-202 709.1 412 86.9
Oeu060750.2 Olea europaea HOM05D004558 ORTHO05D005647 7.2e-202 707.2 420 85.5
Aqoxy2G00035_Aqoxy2G00036 Aquilegia oxysepala HOM05D004558 ORTHO05D005647 2.7e-201 705.3 409 86.6
Nitab4.5_0000123g0170 Nicotiana tabacum HOM05D004558 ORTHO05D005647 2.7e-201 705.3 411 86.4
MSTRG.6287 Avicennia marina HOM05D004558 ORTHO05D005647 1.0e-200 703.4 410 86.6
Eucgr.A02177 Eucalyptus grandis HOM05D004558 ORTHO05D005647 1.0e-200 703.4 408 87.3
Migut.K00174 Erythranthe guttata HOM05D004558 ORTHO05D005647 2.3e-200 702.2 410 86.6
Gohir.A01G192400 Gossypium hirsutum HOM05D004558 ORTHO05D005647 4.0e-200 701.4 406 85.7
Thecc.05G130200 Theobroma cacao HOM05D004558 ORTHO05D005647 4.0e-200 701.4 406 85.7
Nitab4.5_0001270g0120 Nicotiana tabacum HOM05D004558 ORTHO05D005647 5.2e-200 701.0 411 86.1
Duzib093G1273 Durio zibethinus HOM05D004558 ORTHO05D005647 6.7e-200 700.7 410 85.1
Prupe.7G022500 Prunus persica HOM05D004558 ORTHO05D005647 8.8e-200 700.3 421 83.6
Potri.016G025000 Populus trichocarpa HOM05D004558 ORTHO05D005647 1.2e-199 699.9 408 86.5
Haze_20335 Corylus avellana HOM05D004558 ORTHO05D005647 1.5e-199 699.5 406 86.0
Cfa019915 Carpinus fangiana HOM05D004558 ORTHO05D005647 2.0e-199 699.1 408 85.8
QL07p015188 Quercus lobata HOM05D004558 ORTHO05D005647 2.0e-199 699.1 410 85.6
AUR62020990 Chenopodium quinoa HOM05D004558 ORTHO05D005647 2.6e-199 698.7 407 86.5
AUR62018443 Chenopodium quinoa HOM05D004558 ORTHO05D005647 4.4e-199 698.0 407 86.5
Sabra16G0030900 Salix brachista HOM05D004558 ORTHO05D005647 4.4e-199 698.0 408 86.3
arahy.Tifrunner.gnm1.ann1.VDKY5W Arachis hypogaea HOM05D004558 ORTHO05D005647 9.7e-199 696.8 411 85.4
MBI13_g30268_MAGBIO Magnolia biondii HOM05D004558 ORTHO05D005647 9.7e-199 696.8 407 85.3
Lj1g0019045 Lotus japonicus HOM05D004558 ORTHO05D005647 1.3e-198 696.4 404 86.9
ClCG04G004930 Citrullus lanatus HOM05D004558 ORTHO05D005647 2.8e-198 695.3 408 85.3
Potri.006G027300 Populus trichocarpa HOM05D004558 ORTHO05D005647 4.8e-198 694.5 408 85.0
Duzib128G1152 Durio zibethinus HOM05D004558 ORTHO05D005647 8.2e-198 693.7 406 85.7
Sc19g0007850 Simmondsia chinensis HOM05D004558 ORTHO05D005647 1.1e-197 693.3 406 85.0
RcHm_v2.0_Chr3g0494361 Rosa chinensis HOM05D004558 ORTHO05D005647 1.4e-197 693.0 403 85.4
PGR042G2423 Punica granatum HOM05D004558 ORTHO05D005647 1.8e-197 692.6 408 84.6
Ciclev10011842m.g Citrus clementina HOM05D004558 ORTHO05D005647 2.4e-197 692.2 417 83.9
arahy.Tifrunner.gnm1.ann1.XE2WF0 Arachis hypogaea HOM05D004558 ORTHO05D005647 4.1e-197 691.4 413 84.5
CiPaw.09G162600 Carya illinoinensis HOM05D004558 ORTHO05D005647 4.1e-197 691.4 405 84.9
unitig_46.g18485 Utricularia gibba HOM05D004558 ORTHO05D005647 7.0e-197 690.6 411 84.2
FAN19G1019 Fragaria x ananassa HOM05D004558 ORTHO05D005647 9.1e-197 690.3 405 84.9
TWI77G0093 Tripterygium wilfordii HOM05D004558 ORTHO05D005647 9.1e-197 690.3 407 84.0
Gohir.D01G177500 Gossypium hirsutum HOM05D004558 ORTHO05D005647 1.2e-196 689.9 410 84.9
TWI53G2040 Tripterygium wilfordii HOM05D004558 ORTHO05D005647 2.0e-196 689.1 407 83.5
CsaV3_4G031720 Cucumis sativus L. HOM05D004558 ORTHO05D005647 2.7e-196 688.7 408 84.6
FAN23G1063 Fragaria x ananassa HOM05D004558 ORTHO05D005647 2.7e-196 688.7 403 85.1
Sabra06G0020200 Salix brachista HOM05D004558 ORTHO05D005647 4.5e-196 688.0 408 84.6
CANSAT78G1575 Cannabis sativa HOM05D004558 ORTHO05D005647 7.7e-196 687.2 408 85.0
VMungo1383G3341 Vigna mungo HOM05D004558 ORTHO05D005647 7.7e-196 687.2 406 85.0
FvH4_1g28960 Fragaria vesca HOM05D004558 ORTHO05D005647 1.0e-195 686.8 403 84.9
FAN28G2842 Fragaria x ananassa HOM05D004558 ORTHO05D005647 1.0e-195 686.8 403 84.9
Phvul.001G108700 Phaseolus vulgaris HOM05D004558 ORTHO05D005647 1.0e-195 686.8 410 84.9
THA.LOC104824384 Tarenaya hassleriana HOM05D004558 ORTHO05D005647 1.3e-195 686.4 408 83.3
Cc06_g22740 Coffea canephora HOM05D004558 ORTHO05D005647 2.2e-195 685.6 421 82.2
Hund24509 Selenicereus undatus HOM05D004558 ORTHO05D005647 2.2e-195 685.6 411 84.4
FAN26G0634 Fragaria x ananassa HOM05D004558 ORTHO05D005647 3.8e-195 684.9 403 84.6
THA.LOC104803235 Tarenaya hassleriana HOM05D004558 ORTHO05D005647 1.9e-194 682.6 406 82.5
Sopen10g028720 Solanum pennellii HOM05D004558 ORTHO05D005647 2.5e-194 682.2 411 83.9
PGSC0003DMG400007188 Solanum tuberosum HOM05D004558 ORTHO05D005647 2.5e-194 682.2 411 83.9
TPR.G23197 Trifolium pratense HOM05D004558 ORTHO05D005647 2.5e-194 682.2 409 84.1
Gorai.002G225700 Gossypium raimondii HOM05D004558 ORTHO05D005647 3.2e-194 681.8 419 83.1
TAR369G0680 Trochodendron aralioides HOM05D004558 ORTHO05D005647 3.2e-194 681.8 406 84.5
Lalb_Chr14g0365301 Lupinus albus HOM05D004558 ORTHO05D005647 4.2e-194 681.4 408 84.1
CAN.G959.37 Capsicum annuum HOM05D004558 ORTHO05D005647 5.5e-194 681.0 407 84.0
Solyc10g077040.2 Solanum lycopersicum HOM05D004558 ORTHO05D005647 5.5e-194 681.0 411 83.9
Manes.09G073800 Manihot esculenta HOM05D004558 ORTHO05D005647 7.2e-194 680.6 410 83.4
Sed0025713 Sechium edule HOM05D004558 ORTHO05D005647 7.2e-194 680.6 407 83.0
TAR546G0001 Trochodendron aralioides HOM05D004558 ORTHO05D005647 9.4e-194 680.2 406 84.0
ATR1096G103 Amborella trichopoda HOM05D004558 ORTHO05D005647 2.7e-193 678.7 407 84.5
Oeu023011.1 Olea europaea HOM05D004558 ORTHO05D005647 3.6e-193 678.3 381 87.9
Aa31LG10G11840 Aethionema arabicum HOM05D004558 ORTHO05D005647 8.0e-193 677.2 409 82.6
Glyma.03G119500 Glycine max HOM05D004558 ORTHO05D005647 8.0e-193 677.2 407 84.5
Thhalv10006009m.g Eutrema salsugineum HOM05D004558 ORTHO05D005647 1.4e-192 676.4 412 82.3
PSO384G3158 Papaver somniferum HOM05D004558 ORTHO05D005647 3.0e-192 675.2 406 83.5
Peaxi162Scf00003g05355 Petunia axillaris HOM05D004558 ORTHO05D005647 3.0e-192 675.2 431 81.7
BcaC07g40007 Brassica carinata HOM05D004558 ORTHO05D005647 6.8e-192 674.1 414 81.6
BcaB02g07634 Brassica carinata HOM05D004558 ORTHO05D005647 8.8e-192 673.7 412 82.0
Carub.0005s2368 Capsella rubella HOM05D004558 ORTHO05D005647 1.2e-191 673.3 412 82.3
BraA07t29976Z Brassica rapa HOM05D004558 ORTHO05D005647 1.5e-191 672.9 412 82.0
BcaC08g44811 Brassica carinata HOM05D004558 ORTHO05D005647 2.0e-191 672.5 412 81.8
BolC6t37555H Brassica oleracea HOM05D004558 ORTHO05D005647 2.0e-191 672.5 412 81.8
PSO339G0825 Papaver somniferum HOM05D004558 ORTHO05D005647 2.0e-191 672.5 406 83.0
A09p49810 Brassica napus HOM05D004558 ORTHO05D005647 2.6e-191 672.2 414 81.6
BraA09t40434Z Brassica rapa HOM05D004558 ORTHO05D005647 2.6e-191 672.2 414 81.6
CARHR167090 Cardamine hirsuta HOM05D004558 ORTHO05D005647 3.4e-191 671.8 412 81.8
A07p23140 Brassica napus HOM05D004558 ORTHO05D005647 4.4e-191 671.4 412 81.8
Medtr7g088340 Medicago truncatula HOM05D004558 ORTHO05D005647 4.4e-191 671.4 409 83.9
DCAR_016944 Daucus carota HOM05D004558 ORTHO05D005647 5.7e-191 671.0 408 82.8
Rhsim04G0119100 Rhododendron simsii HOM05D004558 ORTHO05D005647 1.3e-190 669.8 410 81.7
GSVIVG01025841001 Vitis vinifera HOM05D004558 ORTHO05D005647 1.7e-190 669.5 371 88.7
DCAR_013513 Daucus carota HOM05D004558 ORTHO05D005647 2.2e-190 669.1 408 83.1
CDE02G2354 Ceratophyllum demersum HOM05D004558 ORTHO05D005647 2.8e-190 668.7 408 82.1
BcaC07g40105 Brassica carinata HOM05D004558 ORTHO05D005647 4.8e-190 667.9 414 81.2
Zm00001eb332650 Zea mays HOM05D004558 ORTHO05D005647 6.3e-190 667.5 407 82.1
Os01g0279100 Oryza sativa ssp. japonica HOM05D004558 ORTHO05D005647 8.3e-190 667.2 407 82.8
Actinidia00883 Actinidia chinensis HOM05D004558 ORTHO05D005647 1.8e-189 666.0 416 80.8
ECA247G1747 Erigeron canadensis HOM05D004558 ORTHO05D005647 1.8e-189 666.0 415 81.7
vmacro08967 Vaccinium macrocarpon HOM05D004558 ORTHO05D005647 1.8e-189 666.0 405 83.0
CSS0026074 Camellia sinensis var. sinensis HOM05D004558 ORTHO05D005647 2.4e-189 665.6 409 82.9
CSS0045826 Camellia sinensis var. sinensis HOM05D004558 ORTHO05D005647 2.4e-189 665.6 409 82.9
Actinidia38207 Actinidia chinensis HOM05D004558 ORTHO05D005647 7.0e-189 664.1 357 90.5
HPP92_000696 Vanilla planifolia HOM05D004558 ORTHO05D005647 7.0e-189 664.1 406 82.3
AL5G38370 Arabidopsis lyrata HOM05D004558 ORTHO05D005647 5.9e-188 661.0 408 81.4
Rhsim04G0119000 Rhododendron simsii HOM05D004558 ORTHO05D005647 1.0e-187 660.2 424 79.0
C06p23840 Brassica napus HOM05D004558 ORTHO05D005647 1.7e-187 659.4 416 80.3
Lsat_1_v5_gn_9_30221 Lactuca sativa HOM05D004558 ORTHO05D005647 1.7e-187 659.4 411 81.5
Hma1.2p1_0251F.1_g102500 Hydrangea macrophylla HOM05D004558 ORTHO05D005647 3.8e-187 658.3 369 88.1
Zm00001eb129000 Zea mays HOM05D004558 ORTHO05D005647 3.8e-187 658.3 404 81.9
Lalb_Chr24g0400681 Lupinus albus HOM05D004558 ORTHO05D005647 6.5e-187 657.5 406 79.6
HanXRQChr10g0291961 Helianthus annuus HOM05D004558 ORTHO05D005647 4.2e-186 654.8 416 80.3
Sp5g05650 Schrenkiella parvula HOM05D004558 ORTHO05D005647 9.5e-186 653.7 357 89.1
Lj1A1078T64 Lonicera japonica HOM05D004558 ORTHO05D005647 1.6e-185 652.9 412 80.8
SGA_v2.0_scaffold69G23196 Striga asiatica HOM05D004558 ORTHO05D005647 2.1e-185 652.5 400 84.5
SEGI_29193 Sequoiadendron giganteum HOM05D004558 ORTHO05D005647 3.6e-185 651.7 366 86.6
unitig_37.g12773 Utricularia gibba HOM05D004558 ORTHO05D005647 1.7e-182 642.9 378 85.2
AT3G56940 Arabidopsis thaliana HOM05D004558 ORTHO05D005647 2.1e-177 625.9 333 91.0
Mapoly0124s0017 Marchantia polymorpha HOM05D004558 ORTHO05D005647 5.2e-176 621.3 403 75.9
SMO119G0375 Selaginella moellendorffii HOM05D004558 ORTHO05D005647 6.4e-174 614.4 369 80.5
Pp3c11_7910 Physcomitrium patens HOM05D004558 ORTHO05D005647 1.8e-173 612.8 370 78.9
AagrBONN_evm.TU.Sc2ySwM_228.50 Anthoceros agrestis HOM05D004558 ORTHO05D005647 3.2e-173 612.1 367 80.9
EL10Ac3g07349 Beta vulgaris HOM05D004558 ORTHO05D005647 1.1e-170 603.6 412 76.5
CDE04G3757 Ceratophyllum demersum HOM05D004558 ORTHO05D005647 1.9e-170 602.8 409 75.6
Atru.chr1.1539 Acer truncatum HOM05D004558 ORTHO05D005647 3.1e-160 568.9 348 81.3
Psat3g082520 Pisum sativum HOM05D004558 ORTHO05D005647 2.2e-150 536.2 323 82.7
Ca_08344_v3 Cicer arietinum L. HOM05D004558 ORTHO05D005647 2.9e-150 535.8 339 80.5
PRCOL_00006479 Prasinoderma coloniale HOM05D004558 ORTHO05D005647 4.1e-149 531.9 357 71.7
Dinv11638 Davidia involucrata HOM05D004558 ORTHO05D005647 1.6e-148 530.0 320 84.7
Cre12.g510050 Chlamydomonas reinhardtii HOM05D004558 ORTHO05D005647 2.8e-145 519.2 381 66.1
Ah.04g150190 Amaranthus hybridus HOM05D004558 ORTHO05D005647 1.2e-143 513.8 405 68.4
Pp3c7_26570 Physcomitrium patens HOM05D004558 ORTHO05D005647 3.8e-142 508.8 279 87.5
HPP92_000650 Vanilla planifolia HOM05D004558 ORTHO05D005647 1.4e-141 506.9 310 81.6
MCO13G411 Micromonas commoda HOM05D004558 ORTHO05D005647 9.6e-138 494.2 345 70.4
SMO115G0161 Selaginella moellendorffii HOM05D004558 ORTHO05D005647 2.2e-134 483.0 377 65.0
MELO3C026802.2 Cucumis melo HOM05D004558 ORTHO05D005647 1.6e-132 476.9 288 83.7
SalBow6G0122 Salvia bowleyana HOM05D004558 ORTHO05D005647 1.5e-130 470.3 248 91.9
Cre07.g346050 Chlamydomonas reinhardtii HOM05D004558 ORTHO05D005647 1.3e-129 467.2 350 64.9
Glyma.19G123800 Glycine max HOM05D004558 ORTHO05D005647 2.8e-129 466.1 299 80.3
SalBow1G4785 Salvia bowleyana HOM05D004558 ORTHO05D005647 2.4e-120 436.4 285 77.5
CDE02G0342 Ceratophyllum demersum HOM05D004558 ORTHO05D005647 4.6e-116 422.2 281 75.1
Oeu021019.1 Olea europaea HOM05D004558 ORTHO05D005647 9.7e-106 387.9 321 66.0
CBR_g50688 Chara braunii HOM05D004558 ORTHO05D005647 8.5e-102 374.8 295 65.8
BolC4t25242H Brassica oleracea HOM05D004558 ORTHO05D005647 2.0e-58 230.7 132 84.1
C04p35620 Brassica napus HOM05D004558 ORTHO05D005647 2.6e-58 230.3 132 83.3
CBR_g55376 Chara braunii HOM05D004558 ORTHO05D005647 1.1e-51 208.4 353 38.5
SEGI_05566 Sequoiadendron giganteum HOM05D004558 ORTHO05D005647 1.4e-48 198.0 118 83.1
SEGI_20922 Sequoiadendron giganteum HOM05D004558 ORTHO05D005647 3.2e-48 196.8 118 82.2
C08p32210 Brassica napus HOM05D004558 ORTHO05D005647 2.0e-42 177.6 104 83.7
A04p03620 Brassica napus HOM05D004558 ORTHO05D005647 9.9e-42 175.3 103 83.5
BraA04t16073Z Brassica rapa HOM05D004558 ORTHO05D005647 9.9e-42 175.3 103 83.5
BcaC02g09879 Brassica carinata HOM05D004558 ORTHO05D005647 1.2e-36 158.3 94 81.9
Pp3c2_30650 Physcomitrium patens HOM05D004558 ORTHO05D005647 5.2e-35 152.9 106 72.6
CDE02G4696 Ceratophyllum demersum HOM05D004558 ORTHO05D005647 1.7e-33 147.9 94 75.5
BcaB02g08342 Brassica carinata HOM05D004558 ORTHO05D005647 1.5e-26 124.8 105 65.7
Ah.13g077400 Amaranthus hybridus HOM05D004558 ORTHO05D000435 9.9e-26 122.1 148 50.0
Lalb_Chr22g0357681 Lupinus albus HOM05D004558 ORTHO05D005647 1.3e-25 121.7 91 70.3
ClCG10G010310 Citrullus lanatus HOM05D004558 ORTHO05D005647 9.3e-24 115.5 71 73.2
AagrBONN_evm.TU.Sc2ySwM_368.2127 Anthoceros agrestis HOM05D004558 ORTHO05D005647 7.3e-21 105.9 59 83.1
MD00G1107700 Malus domestica HOM05D004558 ORTHO05D005647 1.8e-19 101.3 62 79.0
Lalb_Chr22g0358091 Lupinus albus HOM05D004558 ORTHO05D005647 9.0e-19 99.0 47 89.4
ClCG10G010320 Citrullus lanatus HOM05D004558 ORTHO05D005647 1.2e-18 98.6 81 65.4
AagrBONN_evm.TU.Sc2ySwM_344.4282 Anthoceros agrestis HOM05D004558 ORTHO05D000003 9.9e-18 95.5 59 79.7
SEGI_00644 Sequoiadendron giganteum HOM05D004558 ORTHO05D005647 7.4e-13 79.3 42 92.9
Lalb_Chr22g0358081 Lupinus albus HOM05D004558 ORTHO05D005647 3.1e-11 73.9 39 89.7
MSTRG.26191 Avicennia marina HOM05D004558 ORTHO05D087779 2.9e-09 67.4 53 67.9
Lalb_Chr22g0358071 Lupinus albus HOM05D004558 ORTHO05D239964 4.9e-09 66.6 80 53.8


User provided reference genes

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