Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold62G21470 Striga asiatica HOM05D000780 ORTHO05D008187 6.3e-91 337.4 171 100.0
MSTRG.9218 Avicennia marina HOM05D000780 ORTHO05D008187 2.6e-68 262.3 195 72.8
Migut.F02051 Erythranthe guttata HOM05D000780 ORTHO05D008187 2.9e-67 258.8 197 72.1
SalBow1G0848 Salvia bowleyana HOM05D000780 ORTHO05D008187 2.9e-67 258.8 195 71.3
Gohir.A13G161900 Gossypium hirsutum HOM05D000780 ORTHO05D008187 3.3e-63 245.4 191 68.1
SalBow1G8050 Salvia bowleyana HOM05D000780 ORTHO05D008187 7.3e-63 244.2 178 72.5
Cc09_g03050 Coffea canephora HOM05D000780 ORTHO05D008187 1.2e-62 243.4 196 68.4
THA.LOC104821579 Tarenaya hassleriana HOM05D000780 ORTHO05D008187 1.6e-62 243.0 196 67.3
TAR365G0867 Trochodendron aralioides HOM05D000780 ORTHO05D008187 2.1e-62 242.7 194 67.5
Duzib177G0863 Durio zibethinus HOM05D000780 ORTHO05D009033 2.8e-62 242.3 192 67.7
Gohir.D13G172100 Gossypium hirsutum HOM05D000780 ORTHO05D008187 3.6e-62 241.9 191 67.0
HanXRQChr15g0491391 Helianthus annuus HOM05D000780 ORTHO05D008187 3.6e-62 241.9 193 65.8
Thecc.05G266200 Theobroma cacao HOM05D000780 ORTHO05D008187 3.6e-62 241.9 191 67.5
Lj5g0021253 Lotus japonicus HOM05D000780 ORTHO05D008187 4.7e-62 241.5 191 67.0
Glyma.10G167500 Glycine max HOM05D000780 ORTHO05D008187 6.2e-62 241.1 194 66.5
Actinidia06829 Actinidia chinensis HOM05D000780 ORTHO05D008187 1.1e-61 240.4 195 66.7
CiPaw.07G077300 Carya illinoinensis HOM05D000780 ORTHO05D008187 1.4e-61 240.0 196 66.3
CSS0012715 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D008187 2.3e-61 239.2 197 66.5
CSS0043062 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D008187 2.3e-61 239.2 197 66.5
Nn1g03034 Nelumbo nucifera HOM05D000780 ORTHO05D008187 5.2e-61 238.0 194 67.0
vmacro19977 Vaccinium macrocarpon HOM05D000780 ORTHO05D008187 8.9e-61 237.3 200 67.0
Hma1.2p1_0123F.1_g058210 Hydrangea macrophylla HOM05D000780 ORTHO05D008187 1.2e-60 236.9 193 67.4
Phvul.L001832 Phaseolus vulgaris HOM05D000780 ORTHO05D008187 2.6e-60 235.7 194 65.5
VMungo0720G3181 Vigna mungo HOM05D000780 ORTHO05D008187 2.6e-60 235.7 194 65.5
arahy.Tifrunner.gnm1.ann1.A1PM7K Arachis hypogaea HOM05D000780 ORTHO05D008187 4.4e-60 235.0 194 63.9
arahy.Tifrunner.gnm1.ann1.22BZB2 Arachis hypogaea HOM05D000780 ORTHO05D008187 5.8e-60 234.6 194 63.4
Atru.chr2.1118 Acer truncatum HOM05D000780 ORTHO05D008187 7.5e-60 234.2 192 65.6
Nitab4.5_0003148g0010 Nicotiana tabacum HOM05D000780 ORTHO05D008187 9.8e-60 233.8 193 66.3
GSVIVG01026325001 Vitis vinifera HOM05D000780 ORTHO05D008187 1.7e-59 233.0 197 66.0
PGSC0003DMG400028708 Solanum tuberosum HOM05D000780 ORTHO05D008187 2.2e-59 232.6 193 66.3
CsaV3_3G029860 Cucumis sativus L. HOM05D000780 ORTHO05D008187 4.9e-59 231.5 197 66.0
MELO3C026663.2 Cucumis melo HOM05D000780 ORTHO05D008187 6.4e-59 231.1 197 65.5
ECA232G3805 Erigeron canadensis HOM05D000780 ORTHO05D008187 6.4e-59 231.1 198 65.7
Potri.013G050400 Populus trichocarpa HOM05D000780 ORTHO05D008187 8.3e-59 230.7 197 65.0
AUR62000636 Chenopodium quinoa HOM05D000780 ORTHO05D008187 1.1e-58 230.3 196 66.8
Nitab4.5_0000841g0110 Nicotiana tabacum HOM05D000780 ORTHO05D008187 1.1e-58 230.3 193 65.3
Lsat_1_v5_gn_9_45901 Lactuca sativa HOM05D000780 ORTHO05D008187 1.4e-58 229.9 195 66.2
Manes.08G142200 Manihot esculenta HOM05D000780 ORTHO05D008187 1.4e-58 229.9 197 65.5
Cfa006318 Carpinus fangiana HOM05D000780 ORTHO05D008187 1.9e-58 229.6 193 66.3
Peaxi162Scf00077g00146 Petunia axillaris HOM05D000780 ORTHO05D008187 1.9e-58 229.6 190 65.8
Prupe.6G352700 Prunus persica HOM05D000780 ORTHO05D008187 1.9e-58 229.6 192 65.1
Solyc04g050480.4 Solanum lycopersicum HOM05D000780 ORTHO05D008187 1.9e-58 229.6 193 65.3
Sopen04g021260 Solanum pennellii HOM05D000780 ORTHO05D008187 1.9e-58 229.6 193 65.3
Eucgr.B02158 Eucalyptus grandis HOM05D000780 ORTHO05D008187 7.1e-58 227.6 193 62.7
TPR.G10275 Trifolium pratense HOM05D000780 ORTHO05D008187 9.2e-58 227.3 186 64.5
Medtr1g079767 Medicago truncatula HOM05D000780 ORTHO05D008187 1.2e-57 226.9 193 62.2
Sed0008093 Sechium edule HOM05D000780 ORTHO05D008187 1.2e-57 226.9 192 65.1
CANSAT54G1591 Cannabis sativa HOM05D000780 ORTHO05D008187 1.6e-57 226.5 194 62.9
Lalb_Chr06g0168371 Lupinus albus HOM05D000780 ORTHO05D008187 1.6e-57 226.5 195 63.1
AUR62006990 Chenopodium quinoa HOM05D000780 ORTHO05D008187 2.1e-57 226.1 197 65.0
PGR142G2101 Punica granatum HOM05D000780 ORTHO05D008187 2.7e-57 225.7 194 64.9
Ciclev10022342m.g Citrus clementina HOM05D000780 ORTHO05D008187 3.5e-57 225.3 194 63.9
Gorai.013G188600 Gossypium raimondii HOM05D000780 ORTHO05D008187 7.8e-57 224.2 218 58.7
Sabra13G0046100 Salix brachista HOM05D000780 ORTHO05D008187 7.8e-57 224.2 201 62.7
Oeu001248.1 Olea europaea HOM05D000780 ORTHO05D008187 1.7e-56 223.0 183 66.7
Hund21757 Selenicereus undatus HOM05D000780 ORTHO05D008187 3.0e-56 222.2 191 67.0
EL10Ac4g09772 Beta vulgaris HOM05D000780 ORTHO05D008187 6.6e-56 221.1 196 64.8
MD12G1250600 Malus domestica HOM05D000780 ORTHO05D008187 8.6e-56 220.7 193 63.7
CAN.G1311.4 Capsicum annuum HOM05D000780 ORTHO05D008187 1.5e-55 219.9 189 63.5
Aqoxy5G00096 Aquilegia oxysepala HOM05D000780 ORTHO05D008187 1.9e-55 219.5 195 61.0
CDE08G0869 Ceratophyllum demersum HOM05D000780 ORTHO05D008187 4.3e-55 218.4 194 62.4
Carub.0007s3696 Capsella rubella HOM05D000780 ORTHO05D008187 5.6e-55 218.0 187 63.1
FvH4_6g01510 Fragaria vesca HOM05D000780 ORTHO05D008187 9.5e-55 217.2 191 61.8
Lj2A46T71 Lonicera japonica HOM05D000780 ORTHO05D008187 9.5e-55 217.2 186 63.4
Psat6g142000 Pisum sativum HOM05D000780 ORTHO05D008187 1.6e-54 216.5 176 65.9
A07p33060 Brassica napus HOM05D000780 ORTHO05D008187 4.7e-54 214.9 186 63.4
BraA07t30934Z Brassica rapa HOM05D000780 ORTHO05D008187 4.7e-54 214.9 186 63.4
Sp5g21080 Schrenkiella parvula HOM05D000780 ORTHO05D008187 4.7e-54 214.9 187 63.6
Sc08g0004580 Simmondsia chinensis HOM05D000780 ORTHO05D008187 4.7e-54 214.9 209 61.7
Aa31LG2G2020 Aethionema arabicum HOM05D000780 ORTHO05D008187 8.1e-54 214.2 185 64.9
RcHm_v2.0_Chr3g0449181 Rosa chinensis HOM05D000780 ORTHO05D008187 1.1e-53 213.8 191 61.3
HPP92_012831 Vanilla planifolia HOM05D000780 ORTHO05D008187 1.1e-53 213.8 189 62.4
CARHR263660 Cardamine hirsuta HOM05D000780 ORTHO05D008187 1.4e-53 213.4 187 63.6
AL7G51540 Arabidopsis lyrata HOM05D000780 ORTHO05D008187 1.8e-53 213.0 187 62.0
C06p39320 Brassica napus HOM05D000780 ORTHO05D008187 1.8e-53 213.0 187 62.6
BolC6t39025H Brassica oleracea HOM05D000780 ORTHO05D008187 1.8e-53 213.0 187 62.6
PSO832G2551 Papaver somniferum HOM05D000780 ORTHO05D008187 1.8e-53 213.0 200 61.5
Thhalv10019185m.g Eutrema salsugineum HOM05D000780 ORTHO05D008187 3.1e-53 212.2 189 61.4
FAN05G1554 Fragaria x ananassa HOM05D003786 ORTHO05D008187 5.2e-53 211.5 194 60.8
FAN05G3511 Fragaria x ananassa HOM05D003786 ORTHO05D008187 5.2e-53 211.5 194 60.8
FAN14G4371 Fragaria x ananassa HOM05D003786 ORTHO05D008187 1.2e-52 210.3 194 60.3
BcaC08g46086 Brassica carinata HOM05D000780 ORTHO05D008187 1.5e-52 209.9 186 61.8
BcaB01g01289 Brassica carinata HOM05D000780 ORTHO05D008187 2.0e-52 209.5 189 61.4
AT5G38890 Arabidopsis thaliana HOM05D000780 ORTHO05D008187 3.4e-52 208.8 187 61.5
SalBow1G5753 Salvia bowleyana HOM05D000780 ORTHO05D008187 3.7e-51 205.3 169 69.2
QL01p042023 Quercus lobata HOM05D000780 ORTHO05D008187 4.9e-51 204.9 244 50.8
QL03p032337 Quercus lobata HOM05D000780 ORTHO05D008187 4.9e-51 204.9 244 50.8
PSO674G0050 Papaver somniferum HOM05D000780 ORTHO05D008187 1.4e-50 203.4 200 59.5
SEGI_35156 Sequoiadendron giganteum HOM05D000780 ORTHO05D008187 1.5e-47 193.4 188 55.9
SMO172G0199 Selaginella moellendorffii HOM05D000780 ORTHO05D008187 1.1e-45 187.2 192 52.6
COL.COLO4_15539 Corchorus olitorius HOM05D000780 ORTHO05D008187 1.4e-45 186.8 163 63.2
Os02g0815800 Oryza sativa ssp. japonica HOM05D000780 ORTHO05D008187 1.4e-45 186.8 186 59.7
Mapoly0063s0053 Marchantia polymorpha HOM05D000780 ORTHO05D008187 4.9e-43 178.3 185 54.1
BcaB03g15301 Brassica carinata HOM05D000780 ORTHO05D008187 1.1e-42 177.2 175 56.0
Pp3c22_21010 Physcomitrium patens HOM05D000780 ORTHO05D008187 3.5e-41 172.2 189 52.9
CDE07G0101 Ceratophyllum demersum HOM05D000780 ORTHO05D008187 3.0e-40 169.1 147 64.6
Ah.06g187920 Amaranthus hybridus HOM05D000780 ORTHO05D008187 3.3e-39 165.6 260 45.0
FAN14G4130 Fragaria x ananassa HOM05D003786 ORTHO05D004375 4.3e-39 165.2 173 54.3
Dinv06003 Davidia involucrata HOM05D000780 ORTHO05D008187 5.8e-36 154.8 127 66.1
SEGI_30710 Sequoiadendron giganteum HOM05D000780 ORTHO05D008187 1.7e-35 153.3 113 69.9
ATR0724G057 Amborella trichopoda HOM05D000780 ORTHO05D008187 2.2e-35 152.9 109 74.3
DCAR_005521 Daucus carota HOM05D000780 ORTHO05D008187 6.4e-35 151.4 109 72.5
TWI60G0996 Tripterygium wilfordii HOM05D000780 ORTHO05D008187 3.0e-32 142.5 128 60.2
Glyma.20G221600 Glycine max HOM05D000780 ORTHO05D008187 1.4e-29 133.7 127 63.8
Dinv18279 Davidia involucrata HOM05D000780 ORTHO05D008187 1.5e-28 130.2 121 59.5
ClCG03G011510 Citrullus lanatus HOM05D000780 ORTHO05D008187 5.8e-28 128.3 115 63.5
Psat6g127280 Pisum sativum HOM05D000780 ORTHO05D008187 5.8e-28 128.3 141 54.6
Cre07.g312750 Chlamydomonas reinhardtii HOM05D000780 ORTHO05D008187 6.4e-27 124.8 195 42.1
Zm00001eb258800 Zea mays HOM05D000780 ORTHO05D008187 1.2e-25 120.6 120 57.5
QL01p042037 Quercus lobata HOM05D000780 ORTHO05D008187 2.3e-24 116.3 85 74.1
MCO11G401 Micromonas commoda HOM05D000780 ORTHO05D008187 8.7e-24 114.4 199 38.7
Thecc.07G153800 Theobroma cacao HOM05D000780 ORTHO05D008187 9.6e-23 110.9 102 58.8
SalBow1G3250 Salvia bowleyana HOM05D000780 ORTHO05D008187 1.8e-21 106.7 72 69.4
Dinv06000 Davidia involucrata HOM05D000780 ORTHO05D008187 1.0e-19 100.9 56 85.7
MD04G1233000 Malus domestica HOM05D000780 ORTHO05D008187 3.8e-19 99.0 138 47.1
SalBow1G5540 Salvia bowleyana HOM05D000780 ORTHO05D008187 6.5e-19 98.2 72 66.7
Haze_04451 Corylus avellana HOM05D000780 ORTHO05D008187 3.2e-18 95.9 112 50.0
AagrBONN_evm.TU.Sc2ySwM_228.3966 Anthoceros agrestis HOM05D000780 ORTHO05D008187 2.1e-17 93.2 126 44.4
SalBow1G6941 Salvia bowleyana HOM05D000780 ORTHO05D008187 1.4e-13 80.5 56 66.1
SalBow1G1556 Salvia bowleyana HOM05D000111 ORTHO05D013786 3.1e-13 79.3 92 53.3
PRCOL_00002874 Prasinoderma coloniale HOM05D000780 ORTHO05D008187 8.4e-11 71.2 178 35.4
Cpa.g.c42374 Carica papaya HOM05D000780 ORTHO05D008187 5.5e-10 68.6 51 62.7
Cfa025943 Carpinus fangiana HOM05D000780 ORTHO05D008187 1.6e-09 67.0 90 41.1
SalBow1G8168 Salvia bowleyana HOM05D000780 ORTHO05D008187 1.6e-06 57.0 70 50.0


User provided reference genes

Program Settings