Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold47G17685 Striga asiatica HOM05D005778 ORTHO05D007245 0.0e+00 1195.3 648 100.0
Migut.L00055 Erythranthe guttata HOM05D005778 ORTHO05D007245 7.2e-212 741.1 755 60.1
SalBow5G2484 Salvia bowleyana HOM05D005778 ORTHO05D007245 3.6e-211 738.8 653 66.9
Dinv16426 Davidia involucrata HOM05D005778 ORTHO05D007245 2.7e-158 563.1 732 51.0
Sopen04g022870 Solanum pennellii HOM05D005778 ORTHO05D007245 5.2e-146 522.3 648 52.3
Prupe.6G166800 Prunus persica HOM05D005778 ORTHO05D007245 6.9e-146 521.9 644 48.6
Solyc04g051490.3 Solanum lycopersicum HOM05D005778 ORTHO05D007245 2.0e-145 520.4 648 52.3
CiPaw.03G131700 Carya illinoinensis HOM05D005778 ORTHO05D007245 1.3e-144 517.7 654 51.7
Cfa002785 Carpinus fangiana HOM05D005778 ORTHO05D007245 1.4e-143 514.2 653 50.4
Oeu001980.1 Olea europaea HOM05D005778 ORTHO05D007245 9.3e-143 511.5 698 47.6
Lj4C861G1 Lonicera japonica HOM05D005778 ORTHO05D007245 1.6e-142 510.8 721 47.3
Peaxi162Scf00025g03317 Petunia axillaris HOM05D005778 ORTHO05D007245 2.1e-142 510.4 677 49.9
Atru.chr4.723 Acer truncatum HOM05D005778 ORTHO05D007245 3.9e-141 506.1 590 49.7
Thecc.01G117000 Theobroma cacao HOM05D005778 ORTHO05D007245 1.1e-140 504.6 621 47.2
GSVIVG01022267001 Vitis vinifera HOM05D005778 ORTHO05D007245 1.5e-140 504.2 412 62.1
CAN.G860.4 Capsicum annuum HOM05D005778 ORTHO05D007245 9.6e-140 501.5 661 52.5
Actinidia31890 Actinidia chinensis HOM05D005778 ORTHO05D007245 1.6e-139 500.7 515 59.4
CsaV3_6G042140 Cucumis sativus L. HOM05D005778 ORTHO05D007245 1.4e-138 497.7 650 50.6
MD15G1335700 Malus domestica HOM05D005778 ORTHO05D007245 2.4e-138 496.9 571 50.4
TAR628G0341 Trochodendron aralioides HOM05D005778 ORTHO05D007245 1.2e-137 494.6 659 48.7
Nitab4.5_0000184g0070 Nicotiana tabacum HOM05D005778 ORTHO05D007245 3.4e-137 493.0 663 47.4
CANSAT01G2349 Cannabis sativa HOM05D005778 ORTHO05D007245 4.5e-137 492.7 647 49.5
PGR119G1966 Punica granatum HOM05D005778 ORTHO05D007245 9.9e-137 491.5 670 49.4
Sed0016319 Sechium edule HOM05D005778 ORTHO05D007245 1.7e-136 490.7 629 49.6
CSS0023800 Camellia sinensis var. sinensis HOM05D005778 ORTHO05D007245 7.1e-135 485.3 396 69.7
Prupe.1G550600 Prunus persica HOM05D005778 ORTHO05D007245 9.3e-135 485.0 500 53.2
arahy.Tifrunner.gnm1.ann1.A9RKWD Arachis hypogaea HOM05D005778 ORTHO05D007245 2.1e-134 483.8 628 51.3
TWI79G0191 Tripterygium wilfordii HOM05D005778 ORTHO05D007245 2.1e-134 483.8 648 46.8
Manes.12G145400 Manihot esculenta HOM05D005778 ORTHO05D007245 7.9e-134 481.9 626 47.8
arahy.Tifrunner.gnm1.ann1.2KBC6S Arachis hypogaea HOM05D005778 ORTHO05D007245 1.3e-133 481.1 635 50.6
ClCG01G015860 Citrullus lanatus HOM05D005778 ORTHO05D007245 2.3e-133 480.3 655 50.4
Ciclev10025290m.g Citrus clementina HOM05D005778 ORTHO05D007245 3.9e-133 479.6 643 46.2
Gorai.011G114700 Gossypium raimondii HOM05D005778 ORTHO05D007245 1.9e-132 477.2 638 45.9
Rhsim10G0147200 Rhododendron simsii HOM05D005778 ORTHO05D007245 1.3e-131 474.6 310 72.9
Gohir.D10G105000 Gossypium hirsutum HOM05D005778 ORTHO05D007245 3.7e-131 473.0 637 46.8
Nn5g28812 Nelumbo nucifera HOM05D005778 ORTHO05D007245 1.1e-130 471.5 651 49.3
VMungo0251G2366 Vigna mungo HOM05D005778 ORTHO05D007245 5.8e-129 465.7 393 63.6
Potri.007G077400 Populus trichocarpa HOM05D005778 ORTHO05D007245 1.7e-128 464.2 628 47.9
DCAR_016672 Daucus carota HOM05D005778 ORTHO05D007245 4.9e-128 462.6 506 53.0
Phvul.002G267400 Phaseolus vulgaris HOM05D005778 ORTHO05D007245 6.4e-128 462.2 367 70.0
Cc07_g16660 Coffea canephora HOM05D005778 ORTHO05D007245 2.4e-127 460.3 307 71.0
unitig_37.g12529 Utricularia gibba HOM05D005778 ORTHO05D007245 2.4e-127 460.3 388 63.1
Medtr8g092300 Medicago truncatula HOM05D005778 ORTHO05D007245 2.7e-126 456.8 624 49.4
QL06p031408 Quercus lobata HOM05D005778 ORTHO05D007245 2.7e-126 456.8 747 44.4
THA.LOC104804137 Tarenaya hassleriana HOM05D005778 ORTHO05D007245 2.7e-126 456.8 625 49.9
FvH4_1g23210 Fragaria vesca HOM05D005778 ORTHO05D007245 3.5e-126 456.4 654 43.9
MSTRG.15762 Avicennia marina HOM05D005778 ORTHO05D007245 4.6e-126 456.1 271 80.8
TPR.G2233 Trifolium pratense HOM05D005778 ORTHO05D007245 6.0e-126 455.7 592 50.8
Lj4g0013346 Lotus japonicus HOM05D005778 ORTHO05D007245 7.9e-126 455.3 533 53.7
Glyma.05G186200 Glycine max HOM05D005778 ORTHO05D007245 2.3e-125 453.8 390 66.9
Lalb_Chr12g0203421 Lupinus albus HOM05D005778 ORTHO05D007245 6.7e-125 452.2 302 70.5
HanXRQChr09g0254171 Helianthus annuus HOM05D005778 ORTHO05D007245 1.1e-124 451.4 663 44.9
Gohir.A10G082700 Gossypium hirsutum HOM05D005778 ORTHO05D007245 1.5e-124 451.1 486 51.0
Psat7g049960 Pisum sativum HOM05D005778 ORTHO05D007245 9.6e-124 448.4 303 69.6
vmacro12878 Vaccinium macrocarpon HOM05D005778 ORTHO05D007245 9.6e-124 448.4 373 60.6
Eucgr.I00295 Eucalyptus grandis HOM05D005778 ORTHO05D007245 2.1e-123 447.2 309 66.7
MD15G1404100 Malus domestica HOM05D005778 ORTHO05D007245 8.2e-123 445.3 481 57.2
FAN19G0143 Fragaria x ananassa HOM05D005778 ORTHO05D007245 3.1e-122 443.4 664 43.2
Lsat_1_v5_gn_4_138380 Lactuca sativa HOM05D005778 ORTHO05D007245 4.0e-122 443.0 738 41.7
PSO170G4940 Papaver somniferum HOM05D005778 ORTHO05D007245 3.4e-121 439.9 589 48.9
Aqoxy5G02041 Aquilegia oxysepala HOM05D005778 ORTHO05D007245 4.5e-121 439.5 601 49.6
Ca_17674_v3 Cicer arietinum L. HOM05D005778 ORTHO05D007245 4.5e-121 439.5 674 47.2
Sc03g0004580 Simmondsia chinensis HOM05D005778 ORTHO05D007245 4.5e-121 439.5 645 45.9
Sabra07G0065400 Salix brachista HOM05D005778 ORTHO05D007245 2.9e-120 436.8 639 45.9
CDE07G0129 Ceratophyllum demersum HOM05D005778 ORTHO05D007245 2.7e-118 430.3 669 40.7
Thhalv10000104m.g Eutrema salsugineum HOM05D005778 ORTHO05D007245 7.9e-118 428.7 626 46.5
RcHm_v2.0_Chr2g0117911 Rosa chinensis HOM05D005778 ORTHO05D007245 7.9e-118 428.7 462 53.0
FAN23G1488 Fragaria x ananassa HOM05D005778 ORTHO05D007245 1.4e-114 417.9 631 43.3
ATR0800G169 Amborella trichopoda HOM05D005778 ORTHO05D007245 4.1e-114 416.4 350 62.9
RcHm_v2.0_Chr7g0226611 Rosa chinensis HOM05D005778 ORTHO05D007245 6.9e-114 415.6 355 59.2
Sp4g01220 Schrenkiella parvula HOM05D005778 ORTHO05D007245 1.2e-113 414.8 644 45.7
Haze_25082 Corylus avellana HOM05D005778 ORTHO05D007245 2.2e-112 410.6 738 42.4
BcaB08g35041 Brassica carinata HOM05D005778 ORTHO05D007245 2.9e-112 410.2 304 65.1
BraA09t41166Z Brassica rapa HOM05D005778 ORTHO05D007245 3.8e-112 409.8 622 46.1
BcaC07g41093 Brassica carinata HOM05D005778 ORTHO05D007245 1.1e-111 408.3 624 45.7
BolC8t51659H Brassica oleracea HOM05D005778 ORTHO05D007245 1.1e-111 408.3 624 45.7
BolC7t42688H Brassica oleracea HOM05D005778 ORTHO05D007245 1.9e-111 407.5 312 64.1
A09p57740 Brassica napus HOM05D005778 ORTHO05D007245 3.2e-111 406.8 620 45.8
HPP92_017324 Vanilla planifolia HOM05D005778 ORTHO05D007245 4.2e-111 406.4 647 44.4
Aa31LG7G14570 Aethionema arabicum HOM05D005778 ORTHO05D007245 9.3e-111 405.2 651 43.8
C08p40960 Brassica napus HOM05D005778 ORTHO05D007245 1.2e-110 404.8 624 45.4
AL4G11490 Arabidopsis lyrata HOM05D005778 ORTHO05D007245 1.9e-108 397.5 610 45.6
Aqoxy4G02517 Aquilegia oxysepala HOM05D005778 ORTHO05D007245 3.3e-108 396.7 312 61.2
CARHR113310 Cardamine hirsuta HOM05D005778 ORTHO05D007245 4.3e-108 396.4 622 45.8
AT2G22140 Arabidopsis thaliana HOM05D005778 ORTHO05D007245 1.3e-107 394.8 625 45.6
Carub.0004s0131 Capsella rubella HOM05D005778 ORTHO05D007245 3.7e-107 393.3 624 43.6
Hund19626 Selenicereus undatus HOM05D005778 ORTHO05D007245 4.8e-107 392.9 311 59.8
Thhalv10000122m.g Eutrema salsugineum HOM05D005778 ORTHO05D007245 3.8e-104 383.3 465 51.4
MELO3C007452.2 Cucumis melo HOM05D005778 ORTHO05D007245 1.9e-103 380.9 680 40.7
CARHR112840 Cardamine hirsuta HOM05D005778 ORTHO05D007245 9.4e-103 378.6 308 59.4
ECA238G1732 Erigeron canadensis HOM05D005778 ORTHO05D007245 3.6e-102 376.7 624 40.7
AL4G11110 Arabidopsis lyrata HOM05D005778 ORTHO05D007245 2.2e-99 367.5 299 57.5
BolC4t26687H Brassica oleracea HOM05D005778 ORTHO05D007245 2.8e-99 367.1 346 54.9
AT2G21800 Arabidopsis thaliana HOM05D005778 ORTHO05D007245 5.3e-98 362.8 300 57.0
Carub.0004s0085 Capsella rubella HOM05D005778 ORTHO05D007245 1.2e-97 361.7 309 55.7
BcaB06g27789 Brassica carinata HOM05D005778 ORTHO05D007245 2.5e-95 354.0 348 54.3
BcaC02g08761 Brassica carinata HOM05D005778 ORTHO05D007245 1.6e-94 351.3 344 53.2
C04p50950 Brassica napus HOM05D005778 ORTHO05D007245 1.6e-94 351.3 344 53.2
Sp4g00940 Schrenkiella parvula HOM05D005778 ORTHO05D007245 1.4e-93 348.2 392 54.1
BraA04t17279Z Brassica rapa HOM05D005778 ORTHO05D007245 3.0e-93 347.1 297 57.9
Hund03512 Selenicereus undatus HOM05D005778 ORTHO05D007245 1.1e-92 345.1 671 38.6
Zm00001eb068550 Zea mays HOM05D005778 ORTHO05D007245 1.1e-92 345.1 401 47.4
A04p16440 Brassica napus HOM05D005778 ORTHO05D007245 1.1e-90 338.6 296 57.1
EL10Ac6g15224 Beta vulgaris HOM05D005778 ORTHO05D007245 4.1e-90 336.7 678 39.1
Os04g0648700 Oryza sativa ssp. japonica HOM05D005778 ORTHO05D007245 2.2e-88 330.9 594 39.9
FvH4_5g31350 Fragaria vesca HOM05D005778 ORTHO05D007245 4.1e-82 310.1 297 56.2
FAN28G2237 Fragaria x ananassa HOM05D005778 ORTHO05D007245 4.5e-81 306.6 565 37.9
AUR62003644 Chenopodium quinoa HOM05D005778 ORTHO05D007245 1.5e-79 301.6 307 51.8
AagrBONN_evm.TU.Sc2ySwM_228.2963 Anthoceros agrestis HOM05D005778 ORTHO05D007245 1.8e-77 294.7 336 46.7
Mapoly0041s0060 Marchantia polymorpha HOM05D005778 ORTHO05D007245 4.1e-74 283.5 331 41.7
MSTRG.15763 Avicennia marina HOM05D005778 ORTHO05D038954 5.4e-74 283.1 374 55.6
Pp3c5_3310 Physcomitrium patens HOM05D005778 ORTHO05D007245 2.0e-73 281.2 336 42.9
FAN26G2893 Fragaria x ananassa HOM05D005778 ORTHO05D007245 6.1e-70 269.6 615 34.6
COL.COLO4_03471 Corchorus olitorius HOM05D005778 ORTHO05D007245 2.0e-65 254.6 144 82.6
Glyma.08G144700 Glycine max HOM05D005778 ORTHO05D007245 4.3e-63 246.9 181 64.1
Cpa.g.sc72.53 Carica papaya HOM05D005778 ORTHO05D007245 5.6e-63 246.5 499 41.5
Nitab4.5_0011929g0010 Nicotiana tabacum HOM05D005778 ORTHO05D007245 1.5e-60 238.4 249 55.0
Nitab4.5_0021115g0010 Nicotiana tabacum HOM05D005778 ORTHO05D007245 4.4e-60 236.9 250 60.8
SMO352G0072 Selaginella moellendorffii HOM05D005778 ORTHO05D007245 6.2e-54 216.5 267 44.2
Cpa.g.sc72.54 Carica papaya HOM05D005778 ORTHO05D007245 1.9e-47 194.9 123 76.4
CBR_g21043 Chara braunii HOM05D005778 ORTHO05D007245 3.1e-45 187.6 387 32.3
SMO288G0013 Selaginella moellendorffii HOM05D005778 ORTHO05D007245 3.4e-36 157.5 286 36.4
SalBow5G4900 Salvia bowleyana HOM05D005778 ORTHO05D007245 2.4e-29 134.8 184 41.8
SEGI_24036 Sequoiadendron giganteum HOM05D005778 ORTHO05D007245 3.1e-29 134.4 106 63.2
PGSC0003DMG400019704 Solanum tuberosum HOM05D005778 ORTHO05D007245 2.1e-25 121.7 73 76.7
Hma1.2p1_0070F.1_g037570 Hydrangea macrophylla HOM05D005778 ORTHO05D007245 4.0e-21 107.5 109 49.5
unitig_37.g12530 Utricularia gibba HOM05D005778 ORTHO05D038954 6.9e-21 106.7 185 41.6
FAN18G1125 Fragaria x ananassa HOM05D005778 ORTHO05D007245 2.9e-19 101.3 107 48.6
Oeu017817.1 Olea europaea HOM05D001353 ORTHO05D002359 4.2e-18 97.4 64 65.6
CARHR113290 Cardamine hirsuta HOM05D005778 ORTHO05D007245 2.8e-14 84.7 63 58.7
SEGI_25471 Sequoiadendron giganteum HOM05D005778 ORTHO05D007245 6.9e-13 80.1 61 55.7
Oeu028353.1 Olea europaea HOM05D005778 ORTHO05D007245 3.5e-09 67.8 45 71.1
CARHR113280 Cardamine hirsuta HOM05D000125 ORTHO05D009513 2.5e-07 61.6 51 58.8
SMO352G0093 Selaginella moellendorffii HOM05D005778 ORTHO05D007245 3.3e-07 61.2 53 56.6


User provided reference genes

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