Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold43G16363 Striga asiatica HOM05D005507 ORTHO05D007316 1.7e-64 249.2 125 100.0
MSTRG.19080 Avicennia marina HOM05D005507 ORTHO05D007316 4.8e-48 194.5 120 82.5
SGA_v2.0_scaffold75G24953 Striga asiatica HOM05D005507 ORTHO05D007316 5.3e-47 191.0 111 88.3
Oeu024341.2 Olea europaea HOM05D005507 ORTHO05D007316 7.0e-47 190.7 120 78.3
unitig_578.g15691 Utricularia gibba HOM05D005507 ORTHO05D007316 2.7e-46 188.7 120 75.8
TWI53G1275 Tripterygium wilfordii HOM05D005507 ORTHO05D007316 2.2e-45 185.7 120 75.0
Dinv37165 Davidia involucrata HOM05D005507 ORTHO05D007316 3.8e-45 184.9 120 75.8
SalBow3G2672 Salvia bowleyana HOM05D005507 ORTHO05D007316 5.0e-45 184.5 119 77.3
Migut.J00324 Erythranthe guttata HOM05D005507 ORTHO05D007316 1.5e-44 183.0 120 75.8
RcHm_v2.0_Chr3g0466451 Rosa chinensis HOM05D005507 ORTHO05D007316 1.9e-44 182.6 120 75.8
Sopen09g005610 Solanum pennellii HOM05D005507 ORTHO05D007316 2.5e-44 182.2 120 75.0
PGSC0003DMG400008832 Solanum tuberosum HOM05D005507 ORTHO05D007316 2.5e-44 182.2 120 75.0
Cc06_g02560 Coffea canephora HOM05D005507 ORTHO05D007316 3.2e-44 181.8 120 76.7
CAN.G499.3 Capsicum annuum HOM05D005507 ORTHO05D007316 4.2e-44 181.4 120 75.0
MD04G1129900 Malus domestica HOM05D005507 ORTHO05D007316 4.2e-44 181.4 120 75.0
Peaxi162Scf00165g01015 Petunia axillaris HOM05D005507 ORTHO05D007316 4.2e-44 181.4 120 74.2
Gorai.006G172300 Gossypium raimondii HOM05D005507 ORTHO05D007316 7.2e-44 180.6 120 72.5
MD12G1143000 Malus domestica HOM05D005507 ORTHO05D007316 9.4e-44 180.3 120 73.3
Solyc09g010870.4 Solanum lycopersicum HOM05D005507 ORTHO05D007316 1.2e-43 179.9 120 74.2
CANSAT35G1404 Cannabis sativa HOM05D005507 ORTHO05D007316 1.6e-43 179.5 120 72.5
Sabra06G0065800 Salix brachista HOM05D005507 ORTHO05D007316 1.6e-43 179.5 120 75.8
Gohir.D09G151000 Gossypium hirsutum HOM05D005507 ORTHO05D007316 2.1e-43 179.1 120 71.7
Aqoxy2G02218 Aquilegia oxysepala HOM05D005507 ORTHO05D007316 2.7e-43 178.7 120 71.7
PGR004G0811 Punica granatum HOM05D005507 ORTHO05D007316 3.6e-43 178.3 120 70.8
Thecc.05G038400 Theobroma cacao HOM05D005507 ORTHO05D007316 3.6e-43 178.3 120 71.7
GSVIVG01034161001 Vitis vinifera HOM05D005507 ORTHO05D007316 3.6e-43 178.3 120 72.5
FAN02G3281 Fragaria x ananassa HOM05D005507 ORTHO05D007316 4.7e-43 177.9 120 73.3
FAN05G3175 Fragaria x ananassa HOM05D005507 ORTHO05D007316 4.7e-43 177.9 120 73.3
FAN14G4006 Fragaria x ananassa HOM05D005507 ORTHO05D007316 4.7e-43 177.9 120 73.3
Lj2A93G83 Lonicera japonica HOM05D005507 ORTHO05D007316 4.7e-43 177.9 120 71.7
Nn2g11133 Nelumbo nucifera HOM05D005507 ORTHO05D007316 4.7e-43 177.9 120 70.8
Ciclev10011102m.g Citrus clementina HOM05D005507 ORTHO05D007316 1.4e-42 176.4 120 70.8
Hma1.2p1_0936F.1_g238770 Hydrangea macrophylla HOM05D005507 ORTHO05D007316 2.3e-42 175.6 119 72.3
Potri.006G086200 Populus trichocarpa HOM05D005507 ORTHO05D007316 3.0e-42 175.3 120 71.7
TAR633G0577 Trochodendron aralioides HOM05D005507 ORTHO05D007316 3.0e-42 175.3 120 70.0
TAR623G0024 Trochodendron aralioides HOM05D005507 ORTHO05D007316 4.0e-42 174.9 120 68.3
Gohir.A09G155500 Gossypium hirsutum HOM05D005507 ORTHO05D007316 5.2e-42 174.5 120 68.3
Ah.08g210340 Amaranthus hybridus HOM05D005507 ORTHO05D007316 6.8e-42 174.1 118 71.2
Cpa.g.sc188.6 Carica papaya HOM05D005507 ORTHO05D007316 6.8e-42 174.1 120 68.3
Manes.08G080700 Manihot esculenta HOM05D005507 ORTHO05D007316 6.8e-42 174.1 119 71.4
Sc07g0007070 Simmondsia chinensis HOM05D005507 ORTHO05D007316 6.8e-42 174.1 119 71.4
Atru.chr8.1984 Acer truncatum HOM05D005507 ORTHO05D007316 8.8e-42 173.7 120 70.8
CSS0025531 Camellia sinensis var. sinensis HOM05D005507 ORTHO05D007316 1.2e-41 173.3 120 71.7
ECA236G2467 Erigeron canadensis HOM05D005507 ORTHO05D007316 2.6e-41 172.2 119 68.1
Eucgr.A01270 Eucalyptus grandis HOM05D005507 ORTHO05D007316 4.4e-41 171.4 119 68.9
Rhsim05G0193600 Rhododendron simsii HOM05D005507 ORTHO05D007316 4.4e-41 171.4 120 70.8
Lsat_1_v5_gn_8_85360 Lactuca sativa HOM05D005507 ORTHO05D007316 5.7e-41 171.0 120 66.7
Actinidia11260 Actinidia chinensis HOM05D005507 ORTHO05D007316 7.5e-41 170.6 120 68.3
ATR0559G008 Amborella trichopoda HOM05D005507 ORTHO05D007316 7.5e-41 170.6 120 70.0
QL07p048577 Quercus lobata HOM05D005507 ORTHO05D007316 7.5e-41 170.6 120 68.3
Prupe.6G256600 Prunus persica HOM05D005507 ORTHO05D007316 9.8e-41 170.2 120 70.8
Sed0014596 Sechium edule HOM05D005507 ORTHO05D007316 9.8e-41 170.2 120 68.3
CiPaw.09G193400 Carya illinoinensis HOM05D005507 ORTHO05D007316 1.3e-40 169.9 120 69.2
MBI14_g36928_MAGBIO Magnolia biondii HOM05D005507 ORTHO05D007316 1.7e-40 169.5 120 68.3
Cfa017367 Carpinus fangiana HOM05D005507 ORTHO05D007316 2.8e-40 168.7 120 70.8
THA.LOC104816267 Tarenaya hassleriana HOM05D005507 ORTHO05D007316 2.8e-40 168.7 120 66.7
vmacro20162 Vaccinium macrocarpon HOM05D005507 ORTHO05D007316 2.8e-40 168.7 120 67.5
Haze_20804 Corylus avellana HOM05D005507 ORTHO05D007316 3.7e-40 168.3 120 70.8
HanXRQChr04g0125471 Helianthus annuus HOM05D005507 ORTHO05D007316 4.8e-40 167.9 120 65.0
Lj3g0017176 Lotus japonicus HOM05D005507 ORTHO05D007316 8.3e-40 167.2 120 66.7
Ah.13g075900 Amaranthus hybridus HOM05D005507 ORTHO05D007316 1.4e-39 166.4 118 66.9
DCAR_028747 Daucus carota HOM05D005507 ORTHO05D007316 2.4e-39 165.6 120 65.8
PSO151G0160 Papaver somniferum HOM05D005507 ORTHO05D007316 2.4e-39 165.6 120 65.8
PSO339G2235 Papaver somniferum HOM05D005507 ORTHO05D007316 2.4e-39 165.6 120 65.8
Glyma.18G153300 Glycine max HOM05D005507 ORTHO05D007316 4.1e-39 164.9 119 64.7
VMungo0331G0190 Vigna mungo HOM05D005507 ORTHO05D007316 4.1e-39 164.9 120 64.2
Aa31LG1G22500 Aethionema arabicum HOM05D005507 ORTHO05D007316 7.0e-39 164.1 121 62.8
Lalb_Chr07g0193881 Lupinus albus HOM05D005507 ORTHO05D007316 9.1e-39 163.7 120 66.7
CARHR211120 Cardamine hirsuta HOM05D005507 ORTHO05D007316 1.6e-38 162.9 121 62.0
Lj3C966G5 Lonicera japonica HOM05D005507 ORTHO05D007316 1.6e-38 162.9 119 67.2
Lalb_Chr12g0209571 Lupinus albus HOM05D005507 ORTHO05D007316 2.0e-38 162.5 120 64.2
AT5G02250 Arabidopsis thaliana HOM05D005507 ORTHO05D007316 3.5e-38 161.8 121 62.8
arahy.Tifrunner.gnm1.ann1.128L9Z Arachis hypogaea HOM05D005507 ORTHO05D007316 4.5e-38 161.4 120 62.5
arahy.Tifrunner.gnm1.ann1.CQ4D9K Arachis hypogaea HOM05D005507 ORTHO05D007316 4.5e-38 161.4 120 62.5
Carub.0006s0109 Capsella rubella HOM05D005507 ORTHO05D007316 4.5e-38 161.4 121 62.0
CDE04G1833 Ceratophyllum demersum HOM05D005507 ORTHO05D007316 4.5e-38 161.4 120 65.8
MELO3C003135.2 Cucumis melo HOM05D005507 ORTHO05D007316 4.5e-38 161.4 120 65.0
Medtr4g021750 Medicago truncatula HOM05D005507 ORTHO05D007316 7.7e-38 160.6 120 61.7
Thhalv10012718m.g Eutrema salsugineum HOM05D005507 ORTHO05D007316 1.0e-37 160.2 121 61.2
AL6G11510 Arabidopsis lyrata HOM05D005507 ORTHO05D007316 1.3e-37 159.8 121 61.2
EL10As1g23036 Beta vulgaris HOM05D005507 ORTHO05D007316 1.3e-37 159.8 111 69.4
CsaV3_4G025060 Cucumis sativus L. HOM05D005507 ORTHO05D007316 1.3e-37 159.8 120 65.0
Ca_19991_v3 Cicer arietinum L. HOM05D005507 ORTHO05D007316 2.3e-37 159.1 120 62.5
A10p33370 Brassica napus HOM05D005507 ORTHO05D007316 2.9e-37 158.7 121 61.2
C09p74280 Brassica napus HOM05D005507 ORTHO05D007316 2.9e-37 158.7 121 61.2
BolC9t60161H Brassica oleracea HOM05D005507 ORTHO05D007316 2.9e-37 158.7 121 61.2
BraA10t45368Z Brassica rapa HOM05D005507 ORTHO05D007316 2.9e-37 158.7 121 61.2
Sp6g40200 Schrenkiella parvula HOM05D005507 ORTHO05D007316 3.8e-37 158.3 121 60.3
ClCG04G008130 Citrullus lanatus HOM05D005507 ORTHO05D007316 1.1e-36 156.8 111 67.6
AUR62038110 Chenopodium quinoa HOM05D005507 ORTHO05D007316 1.5e-36 156.4 109 67.0
COL.COLO4_18270 Corchorus olitorius HOM05D005507 ORTHO05D007316 1.5e-36 156.4 120 68.3
Psat7g235360 Pisum sativum HOM05D005507 ORTHO05D007316 2.8e-35 152.1 119 59.7
Zm00001eb148300 Zea mays HOM05D005507 ORTHO05D007316 3.6e-35 151.8 120 58.3
TPR.G5632 Trifolium pratense HOM05D005507 ORTHO05D007316 8.9e-34 147.1 120 58.3
SEGI_11448 Sequoiadendron giganteum HOM05D005507 ORTHO05D007316 9.8e-33 143.7 119 58.8
Nitab4.5_0011443g0030 Nicotiana tabacum HOM05D005507 ORTHO05D007316 7.0e-31 137.5 90 76.7
Nitab4.5_0000705g0220 Nicotiana tabacum HOM05D005507 ORTHO05D007316 8.9e-26 120.6 80 76.2
Mapoly0006s0179 Marchantia polymorpha HOM05D005507 ORTHO05D007316 1.2e-25 120.2 112 50.9
Pp3c14_20610 Physcomitrium patens HOM05D005507 ORTHO05D007316 1.7e-24 116.3 115 49.6
SMO119G0389 Selaginella moellendorffii HOM05D005507 ORTHO05D007316 6.0e-22 107.8 111 51.4
AagrBONN_evm.TU.Sc2ySwM_362.2750 Anthoceros agrestis HOM05D005507 ORTHO05D007316 1.1e-18 97.1 113 43.4
Zm00001eb371310 Zea mays HOM05D000282 ORTHO05D007316 1.3e-16 90.1 80 50.0
CDE07G2039 Ceratophyllum demersum HOM05D005507 ORTHO05D007316 1.3e-13 80.1 64 60.9
Zm00001eb048500 Zea mays HOM05D005507 ORTHO05D007316 9.5e-12 73.9 63 50.8
Cre12.g500650 Chlamydomonas reinhardtii HOM05D005507 ORTHO05D007316 2.8e-11 72.4 114 37.7
MCO15G083 Micromonas commoda HOM05D005507 ORTHO05D007316 8.1e-11 70.9 101 40.6
PRCOL_00000383 Prasinoderma coloniale HOM05D005507 ORTHO05D007316 1.9e-07 59.7 92 38.0
Nitab4.5_0011443g0010 Nicotiana tabacum HOM05D005507 ORTHO05D007316 3.2e-07 58.9 38 68.4
Nitab4.5_0000705g0210 Nicotiana tabacum HOM05D005507 ORTHO05D007316 7.1e-07 57.8 38 65.8
AUR62025794 Chenopodium quinoa HOM05D005507 ORTHO05D007316 1.6e-06 56.6 42 64.3
Phvul.010G010050 Phaseolus vulgaris HOM05D005507 ORTHO05D007316 6.0e-06 54.7 36 66.7
COL.COLO4_14788 Corchorus olitorius HOM05D005507 ORTHO05D007316 7.8e-06 54.3 35 71.4


User provided reference genes

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