Gene: SGA_v2.0_scaffold75G24953

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold75G24953
  • Transcript Identifier SGA_v2.0_scaffold75T24953
  • Gene Type Coding gene
  • Location scaffold75 : 1100297-1111125 : negative

Gene Family Information

  • ID HOM05D005507
  • #Genes/#Species 139/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product Ribonuclease II/R family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006364
ISO
PLAZA Integrative OrthologyrRNA processing AT5G02250
GO:0009658
ISO
PLAZA Integrative Orthologychloroplast organization AT5G02250

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
InterProRNA binding
GO:0004540
IEA
InterProribonuclease activity
GO:0004252
IEA
InterProserine-type endopeptidase activity
GO:0000175
ISO
PLAZA Integrative Orthology3'-5'-exoribonuclease activity AT5G02250

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
InterProintegral component of membrane
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G02250
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT5G02250

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001900 Ribonuclease II/R
IPR022764 Peptidase S54, rhomboid domain
IPR012340 Nucleic acid-binding, OB-fold
IPR035952 Rhomboid-like superfamily
Mapman id Description
16.11.1.2 RNA processing.organelle machinery.ribonuclease activities.exoribonuclease (RNase R)
19.4.2.6 Protein homeostasis.proteolysis.serine-type peptidase activities.S54-class protease (RBL))