Gene: Cre12.g500650

General Information

Structural Information

  • Species Chlamydomonas reinhardtii
  • Gene Identifier Cre12.g500650
  • Transcript Identifier Cre12.g500650.t1.2
  • Gene Type Coding gene
  • Location chromosome_12 : 3040099-3046669 : positive

Gene Family Information

  • ID HOM05D005507
  • #Genes/#Species 139/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Cre12.g500650.v5.5
  • pacid 30792398
  • alias g12563.t1
  • geneName RNB2
  • uniprot A8IJ46

Descriptions

  • Description Expressed conserved 3'-5' Exoribonuclease II; RNase R. Genbank accession EF431887, PMID: 17351118. Chloroplast targeting experimentally verified.
  • Description 3'-5' exoribonuclease II
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090501
IEA
GOA DatabaseRNA phosphodiester bond hydrolysis
GO:0006364
ISO
PLAZA Integrative OrthologyrRNA processing AT5G02250
GO:0009658
ISO
PLAZA Integrative Orthologychloroplast organization AT5G02250

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0004540
IEA
GOA Databaseribonuclease activity
GO:0004540
IEA
InterProribonuclease activity
GO:0000175
ISO
PLAZA Integrative Orthology3'-5'-exoribonuclease activity AT5G02250

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G02250
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT5G02250

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001900 Ribonuclease II/R
IPR012340 Nucleic acid-binding, OB-fold
Mapman id Description
16.11.1.2 RNA processing.organelle machinery.ribonuclease activities.exoribonuclease (RNase R)