Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold34G13795 Striga asiatica HOM05D006561 ORTHO05D008097 7.5e-118 427.2 212 100.0
MSTRG.15242 Avicennia marina HOM05D006561 ORTHO05D008097 1.6e-80 303.1 206 72.3
Migut.M00775 Erythranthe guttata HOM05D006561 ORTHO05D008097 4.5e-78 295.0 206 70.4
Oeu005397.1 Olea europaea HOM05D006561 ORTHO05D008097 1.4e-76 290.0 206 69.4
Cc05_g11670 Coffea canephora HOM05D006561 ORTHO05D008097 2.3e-74 282.7 208 68.3
Rhsim06G0203200 Rhododendron simsii HOM05D006561 ORTHO05D008097 1.5e-73 280.0 206 65.0
CSS0025681 Camellia sinensis var. sinensis HOM05D006561 ORTHO05D008097 9.6e-73 277.3 204 67.2
CSS0029173 Camellia sinensis var. sinensis HOM05D006561 ORTHO05D008097 9.6e-73 277.3 204 67.2
unitig_747.g21579 Utricularia gibba HOM05D006561 ORTHO05D008097 4.0e-71 271.9 206 65.0
Lj8A153G39 Lonicera japonica HOM05D006561 ORTHO05D008097 9.0e-71 270.8 205 65.4
Dinv14944 Davidia involucrata HOM05D006561 ORTHO05D008097 1.2e-70 270.4 206 64.6
Hma1.2p1_0416F.1_g148410 Hydrangea macrophylla HOM05D006561 ORTHO05D008097 1.7e-69 266.5 205 63.4
CiPaw.11G166900 Carya illinoinensis HOM05D006561 ORTHO05D008097 8.4e-69 264.2 206 64.1
Cfa020616 Carpinus fangiana HOM05D006561 ORTHO05D008097 1.4e-68 263.5 206 62.6
TAR627G0129 Trochodendron aralioides HOM05D006561 ORTHO05D008097 1.9e-68 263.1 210 61.9
Haze_09389 Corylus avellana HOM05D006561 ORTHO05D008097 1.2e-67 260.4 206 62.6
Gohir.D01G047500 Gossypium hirsutum HOM05D006561 ORTHO05D008097 8.7e-66 254.2 194 62.9
Gorai.002G067000 Gossypium raimondii HOM05D006561 ORTHO05D008097 8.7e-66 254.2 194 62.9
ClCG11G017750 Citrullus lanatus HOM05D006561 ORTHO05D008097 3.3e-65 252.3 205 61.0
Thecc.07G098700 Theobroma cacao HOM05D006561 ORTHO05D008097 4.3e-65 251.9 224 56.2
Eucgr.F01175 Eucalyptus grandis HOM05D006561 ORTHO05D008097 7.4e-65 251.1 206 58.7
Nitab4.5_0002019g0020 Nicotiana tabacum HOM05D006561 ORTHO05D008097 9.6e-65 250.8 206 60.7
Ciclev10009269m.g Citrus clementina HOM05D006561 ORTHO05D008097 1.3e-64 250.4 206 62.1
Nitab4.5_0000246g0010 Nicotiana tabacum HOM05D006561 ORTHO05D008097 1.3e-64 250.4 206 61.2
PGSC0003DMG401012439 Solanum tuberosum HOM05D006561 ORTHO05D008097 1.6e-64 250.0 206 61.2
Gohir.A01G061000 Gossypium hirsutum HOM05D006561 ORTHO05D008097 4.8e-64 248.4 194 61.9
Sed0026268 Sechium edule HOM05D006561 ORTHO05D008097 8.2e-64 247.7 205 59.5
Manes.03G104900 Manihot esculenta HOM05D006561 ORTHO05D008097 1.1e-63 247.3 206 59.2
Sopen07g031000 Solanum pennellii HOM05D006561 ORTHO05D008097 5.3e-63 245.0 207 59.4
Solyc07g062780.3 Solanum lycopersicum HOM05D006561 ORTHO05D008097 1.2e-62 243.8 207 58.9
TWI38G0530 Tripterygium wilfordii HOM05D006561 ORTHO05D008097 4.5e-62 241.9 206 58.7
Atru.chr2.2390 Acer truncatum HOM05D006561 ORTHO05D008097 1.3e-61 240.4 206 57.3
Potri.011G141200 Populus trichocarpa HOM05D006561 ORTHO05D008097 1.7e-61 240.0 209 57.9
CsaV3_4G033370 Cucumis sativus L. HOM05D006561 ORTHO05D008097 2.2e-61 239.6 205 58.5
Aqoxy1G02303 Aquilegia oxysepala HOM05D006561 ORTHO05D008097 5.0e-61 238.4 201 56.2
Nn1g06395 Nelumbo nucifera HOM05D006561 ORTHO05D008097 1.1e-60 237.3 208 54.8
Sabra11G0126800 Salix brachista HOM05D006561 ORTHO05D008097 1.4e-60 236.9 209 56.9
Sc16g0007290 Simmondsia chinensis HOM05D006561 ORTHO05D008097 1.4e-60 236.9 209 58.4
Aa31LG8G2350 Aethionema arabicum HOM05D006724 ORTHO05D008514 5.5e-60 235.0 201 57.2
A05p34300 Brassica napus HOM05D006561 ORTHO05D008097 5.5e-60 235.0 201 54.2
MELO3C025617.2 Cucumis melo HOM05D006561 ORTHO05D008097 5.5e-60 235.0 213 56.3
BcaB06g29539 Brassica carinata HOM05D006561 ORTHO05D008097 9.3e-60 234.2 201 54.2
C05p52080 Brassica napus HOM05D006561 ORTHO05D008097 9.3e-60 234.2 201 54.2
Lsat_1_v5_gn_5_127501 Lactuca sativa HOM05D006561 ORTHO05D008097 9.3e-60 234.2 205 57.1
BolC5t33893H Brassica oleracea HOM05D006561 ORTHO05D008097 1.2e-59 233.8 201 54.2
Cpa.g.sc80.2 Carica papaya HOM05D006561 ORTHO05D008097 1.2e-59 233.8 206 56.8
Duzib213G1006 Durio zibethinus HOM05D006561 ORTHO05D008097 1.2e-59 233.8 205 57.1
Hund17607 Selenicereus undatus HOM05D006561 ORTHO05D008097 1.2e-59 233.8 204 56.9
Peaxi162Scf00069g01837 Petunia axillaris HOM05D006561 ORTHO05D008097 2.7e-59 232.6 206 60.7
MD03G1235300 Malus domestica HOM05D006561 ORTHO05D008097 3.5e-59 232.3 203 56.7
CARHR090130 Cardamine hirsuta HOM05D006561 ORTHO05D008097 6.1e-59 231.5 201 55.2
PSO675G8981 Papaver somniferum HOM05D006561 ORTHO05D008097 6.1e-59 231.5 206 53.9
Thhalv10021394m.g Eutrema salsugineum HOM05D006561 ORTHO05D008097 7.9e-59 231.1 201 54.2
AT3G15150 Arabidopsis thaliana HOM05D006561 ORTHO05D008097 1.3e-58 230.3 201 54.7
PGR083G2053 Punica granatum HOM05D006561 ORTHO05D008097 1.8e-58 229.9 212 53.3
vmacro11896 Vaccinium macrocarpon HOM05D006561 ORTHO05D008097 3.0e-58 229.2 276 46.0
GSVIVG01014276001 Vitis vinifera HOM05D006561 ORTHO05D008097 3.9e-58 228.8 173 63.0
BraA05t22251Z Brassica rapa HOM05D006561 ORTHO05D008097 6.7e-58 228.0 208 52.4
Carub.0003s1480 Capsella rubella HOM05D006561 ORTHO05D008097 8.7e-58 227.6 192 55.7
RcHm_v2.0_Chr5g0032331 Rosa chinensis HOM05D006561 ORTHO05D008097 8.7e-58 227.6 209 55.0
ECA234G0004 Erigeron canadensis HOM05D006561 ORTHO05D008097 1.9e-57 226.5 205 53.2
THA.LOC104818093 Tarenaya hassleriana HOM05D006561 ORTHO05D008097 2.5e-57 226.1 201 55.7
AUR62019482 Chenopodium quinoa HOM05D006561 ORTHO05D008097 3.3e-57 225.7 206 55.8
MBI02_g25404_MAGBIO Magnolia biondii HOM05D006561 ORTHO05D008097 4.3e-57 225.3 206 56.8
Sp3g13360 Schrenkiella parvula HOM05D006561 ORTHO05D008097 4.3e-57 225.3 203 52.7
EL10Ac4g08253 Beta vulgaris HOM05D006561 ORTHO05D008097 5.7e-57 224.9 206 55.3
FvH4_3g19260 Fragaria vesca HOM05D006561 ORTHO05D008097 5.7e-57 224.9 209 53.1
SHI39306 Sapria himalayana HOM05D006561 ORTHO05D008097 5.7e-57 224.9 203 53.2
SHI39545 Sapria himalayana HOM05D006561 ORTHO05D008097 5.7e-57 224.9 203 53.2
ATR0602G252 Amborella trichopoda HOM05D006561 ORTHO05D008097 7.4e-57 224.6 205 54.6
AL3G27540 Arabidopsis lyrata HOM05D006561 ORTHO05D008097 7.4e-57 224.6 201 54.2
MBI02_g44100_MAGBIO Magnolia biondii HOM05D006561 ORTHO05D008097 7.4e-57 224.6 206 56.8
MD11G1255800 Malus domestica HOM05D006561 ORTHO05D008097 1.6e-56 223.4 189 57.7
HanXRQChr10g0302511 Helianthus annuus HOM05D006561 ORTHO05D008097 2.8e-56 222.6 203 55.2
FAN11G0360 Fragaria x ananassa HOM05D006561 ORTHO05D008097 3.7e-56 222.2 209 52.6
CAN.G162.30 Capsicum annuum HOM05D006561 ORTHO05D008097 1.1e-55 220.7 167 63.5
DCAR_017121 Daucus carota HOM05D006561 ORTHO05D008097 1.8e-55 219.9 207 53.1
VMungo1080G0633 Vigna mungo HOM05D006561 ORTHO05D008097 2.4e-55 219.5 209 52.6
FAN25G3572 Fragaria x ananassa HOM05D006561 ORTHO05D008097 9.0e-55 217.6 209 51.7
Lalb_Chr25g0286221 Lupinus albus HOM05D006561 ORTHO05D008097 1.2e-54 217.2 205 51.2
arahy.Tifrunner.gnm1.ann1.RM2LTG Arachis hypogaea HOM05D006561 ORTHO05D008097 2.6e-54 216.1 191 54.5
Phvul.005G029100 Phaseolus vulgaris HOM05D006561 ORTHO05D008097 3.4e-54 215.7 206 52.4
AUR62036152 Chenopodium quinoa HOM05D006561 ORTHO05D008097 4.5e-54 215.3 206 53.9
Glyma.13G273500 Glycine max HOM05D006561 ORTHO05D008097 1.7e-53 213.4 206 50.5
Prupe.4G174000 Prunus persica HOM05D006561 ORTHO05D008097 2.5e-52 209.5 163 59.5
Ca_03532_v3 Cicer arietinum L. HOM05D006561 ORTHO05D008097 3.2e-52 209.1 206 51.0
CANSAT35G0349 Cannabis sativa HOM05D006561 ORTHO05D008097 2.1e-51 206.5 205 48.3
Psat0s1402g0080 Pisum sativum HOM05D006561 ORTHO05D008097 2.7e-51 206.1 193 50.3
Lj3g0026269 Lotus japonicus HOM05D006561 ORTHO05D008097 1.8e-50 203.4 202 48.0
TPR.G7947 Trifolium pratense HOM05D006561 ORTHO05D008097 3.0e-50 202.6 206 49.0
Zm00001eb295840 Zea mays HOM05D006561 ORTHO05D008097 6.7e-50 201.4 197 49.7
Medtr2g078640 Medicago truncatula HOM05D006561 ORTHO05D008097 1.7e-48 196.8 193 46.6
PSO541G4753 Papaver somniferum HOM05D006561 ORTHO05D008097 1.2e-46 190.7 182 52.2
Phvul.005G075200 Phaseolus vulgaris HOM05D006561 ORTHO05D008097 2.0e-46 189.9 166 53.6
HPP92_024567 Vanilla planifolia HOM05D006561 ORTHO05D008097 4.5e-46 188.7 254 44.1
CDE08G0579 Ceratophyllum demersum HOM05D006561 ORTHO05D008097 2.2e-40 169.9 147 56.5
Actinidia12544 Actinidia chinensis HOM05D006561 ORTHO05D008097 2.8e-40 169.5 166 54.2
AagrBONN_evm.TU.Sc2ySwM_228.4556 Anthoceros agrestis HOM05D006561 ORTHO05D008097 2.8e-40 169.5 192 41.1
arahy.Tifrunner.gnm1.ann1.YD6KBQ Arachis hypogaea HOM05D006561 ORTHO05D008097 4.8e-40 168.7 190 45.8
Ah.06g184730 Amaranthus hybridus HOM05D006561 ORTHO05D008097 7.0e-39 164.9 203 46.8
Hma1.2p1_0416F.1_g148400 Hydrangea macrophylla HOM05D006561 ORTHO05D008097 2.0e-38 163.3 135 61.5
Pp3c22_18560 Physcomitrium patens HOM05D006561 ORTHO05D008097 6.5e-37 158.3 180 41.1
Haze_09400 Corylus avellana HOM05D006561 ORTHO05D008097 2.5e-36 156.4 130 61.5
QL08p023707 Quercus lobata HOM05D006561 ORTHO05D008097 4.7e-35 152.1 131 61.1
Mapoly0096s0048 Marchantia polymorpha HOM05D006561 ORTHO05D008097 1.7e-32 143.7 180 37.2
CBR_g861 Chara braunii HOM05D006561 ORTHO05D008097 3.5e-30 136.0 194 31.4
Actinidia07498 Actinidia chinensis HOM05D006561 ORTHO05D008097 1.8e-26 123.6 79 72.2
FAN16G3278 Fragaria x ananassa HOM05D006561 ORTHO05D008097 8.8e-26 121.3 134 49.3
arahy.Tifrunner.gnm1.ann1.YKS4T6 Arachis hypogaea HOM05D006561 ORTHO05D008097 9.8e-25 117.9 133 47.4
SMO143G0268 Selaginella moellendorffii HOM05D006561 ORTHO05D008097 1.3e-24 117.5 181 37.0
QL08p023698 Quercus lobata HOM05D006561 ORTHO05D008097 2.2e-24 116.7 74 68.9
SMO265G0056 Selaginella moellendorffii HOM05D006561 ORTHO05D008097 1.0e-21 107.8 151 39.1
PRCOL_00000682 Prasinoderma coloniale HOM05D006561 ORTHO05D008097 1.5e-12 77.4 206 25.7
Os05g0563500 Oryza sativa ssp. japonica HOM05D006561 ORTHO05D008097 2.1e-11 73.6 80 47.5
Haze_09398 Corylus avellana HOM05D006561 ORTHO05D008097 3.0e-10 69.7 57 66.7
Nn5g27383 Nelumbo nucifera HOM05D006561 ORTHO05D008097 4.4e-09 65.9 45 62.2
Haze_09393 Corylus avellana HOM05D006561 ORTHO05D008097 7.5e-09 65.1 71 53.5
Haze_09394 Corylus avellana HOM05D006561 ORTHO05D165302 3.2e-07 59.7 130 32.3
Pp3c23_10880 Physcomitrium patens HOM05D006561 ORTHO05D008097 1.6e-06 57.4 71 35.2
Mapoly0066s0041 Marchantia polymorpha HOM05D006561 ORTHO05D008097 2.0e-06 57.0 45 48.9


User provided reference genes

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