Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold342G49409 Striga asiatica HOM05D006110 ORTHO05D007774 0.0e+00 1258.0 639 100.0
MSTRG.16978 Avicennia marina HOM05D006110 ORTHO05D007774 1.9e-249 865.9 664 71.1
Migut.B01193 Erythranthe guttata HOM05D006110 ORTHO05D007774 1.8e-231 806.2 669 67.7
Cfa010950 Carpinus fangiana HOM05D006110 ORTHO05D007774 8.9e-231 803.9 660 66.7
Manes.04G156400 Manihot esculenta HOM05D006110 ORTHO05D007774 3.7e-229 798.5 661 65.7
Dinv11233 Davidia involucrata HOM05D006110 ORTHO05D007774 1.2e-227 793.5 636 67.5
GSVIVG01036631001 Vitis vinifera HOM05D006110 ORTHO05D007774 1.3e-226 790.0 661 65.7
COL.COLO4_06638 Corchorus olitorius HOM05D006110 ORTHO05D007774 1.1e-225 786.9 651 65.4
GSVIVG01036611001 Vitis vinifera HOM05D006110 ORTHO05D007774 1.1e-225 786.9 661 65.5
Sed0024249 Sechium edule HOM05D006110 ORTHO05D007774 2.5e-225 785.8 658 64.9
QL04p021435 Quercus lobata HOM05D006110 ORTHO05D007774 7.3e-225 784.3 663 65.9
QL07p029279 Quercus lobata HOM05D006110 ORTHO05D007774 7.3e-225 784.3 663 65.9
CsaV3_5G023770 Cucumis sativus L. HOM05D006110 ORTHO05D007774 4.7e-224 781.6 661 64.6
Prupe.7G006200 Prunus persica HOM05D006110 ORTHO05D007774 8.1e-224 780.8 662 65.6
CANSAT56G0825 Cannabis sativa HOM05D006110 ORTHO05D007774 1.1e-223 780.4 665 64.1
CiPaw.06G056300 Carya illinoinensis HOM05D006110 ORTHO05D007774 1.1e-223 780.4 665 64.7
Duzib106G1787 Durio zibethinus HOM05D006110 ORTHO05D007774 5.2e-223 778.1 665 63.9
Eucgr.E03954 Eucalyptus grandis HOM05D006110 ORTHO05D007774 1.5e-222 776.5 662 63.9
Actinidia07968 Actinidia chinensis HOM05D006110 ORTHO05D007774 2.0e-222 776.2 576 70.7
MELO3C022813.2 Cucumis melo HOM05D006110 ORTHO05D007774 2.0e-222 776.2 661 64.0
VMungo1080G0231 Vigna mungo HOM05D006110 ORTHO05D007774 9.9e-222 773.9 662 65.1
RcHm_v2.0_Chr1g0327151 Rosa chinensis HOM05D006110 ORTHO05D007774 4.9e-221 771.5 668 63.6
CSS0009585 Camellia sinensis var. sinensis HOM05D006110 ORTHO05D007774 6.4e-221 771.2 639 66.2
Ciclev10000631m.g Citrus clementina HOM05D006110 ORTHO05D007774 1.1e-220 770.4 644 65.2
Glyma.04G133800 Glycine max HOM05D006110 ORTHO05D007774 1.4e-220 770.0 661 64.1
Lj3g0023685 Lotus japonicus HOM05D006110 ORTHO05D007774 2.4e-220 769.2 661 64.8
Atru.chr12.1309 Acer truncatum HOM05D006110 ORTHO05D007774 7.8e-219 764.2 643 64.5
Solyc01g096600.4 Solanum lycopersicum HOM05D006110 ORTHO05D007774 1.0e-218 763.8 639 64.6
Sopen01g040330 Solanum pennellii HOM05D006110 ORTHO05D007774 1.0e-218 763.8 641 64.6
Rhsim07G0069200 Rhododendron simsii HOM05D006110 ORTHO05D007774 1.3e-218 763.5 701 61.9
TPR.G7074 Trifolium pratense HOM05D006110 ORTHO05D007774 3.9e-218 761.9 655 64.1
HanXRQChr02g0048711 Helianthus annuus HOM05D006110 ORTHO05D007774 5.1e-218 761.5 659 64.0
FvH4_7g03810 Fragaria vesca HOM05D006110 ORTHO05D007774 6.6e-218 761.1 642 65.3
CAN.G134.27 Capsicum annuum HOM05D006110 ORTHO05D007774 8.6e-218 760.8 638 65.4
ECA233G5267 Erigeron canadensis HOM05D006110 ORTHO05D007774 1.1e-217 760.4 658 63.5
FAN03G2625 Fragaria x ananassa HOM05D006110 ORTHO05D007774 1.1e-217 760.4 664 64.6
Haze_02994 Corylus avellana HOM05D006110 ORTHO05D007774 1.9e-217 759.6 660 63.3
Sc17g0003940 Simmondsia chinensis HOM05D006110 ORTHO05D007774 3.3e-217 758.8 590 68.0
Phvul.005G004500 Phaseolus vulgaris HOM05D006110 ORTHO05D007774 4.3e-217 758.4 637 65.1
arahy.Tifrunner.gnm1.ann1.Y0U2QZ Arachis hypogaea HOM05D006110 ORTHO05D007774 1.6e-216 756.5 660 63.9
Gohir.A05G399300 Gossypium hirsutum HOM05D006110 ORTHO05D007774 3.6e-216 755.4 653 62.8
Psat5g221960 Pisum sativum HOM05D006110 ORTHO05D007774 6.2e-216 754.6 649 64.1
arahy.Tifrunner.gnm1.ann1.P4BN3A Arachis hypogaea HOM05D006110 ORTHO05D007774 8.1e-216 754.2 660 63.8
Potri.001G031700 Populus trichocarpa HOM05D006110 ORTHO05D007774 8.1e-216 754.2 642 64.5
Gorai.012G019300 Gossypium raimondii HOM05D006110 ORTHO05D007774 1.8e-215 753.1 653 62.6
EL10Ac7g17197 Beta vulgaris HOM05D006110 ORTHO05D007774 3.1e-215 752.3 665 63.2
SalBow5G1256 Salvia bowleyana HOM05D006110 ORTHO05D007774 3.1e-215 752.3 650 66.0
THA.LOC104826748 Tarenaya hassleriana HOM05D006110 ORTHO05D007774 3.1e-215 752.3 652 63.0
Potri.003G194000 Populus trichocarpa HOM05D006110 ORTHO05D007774 6.8e-215 751.1 640 63.9
Lsat_1_v5_gn_6_13001 Lactuca sativa HOM05D006110 ORTHO05D007774 2.6e-214 749.2 584 67.6
Peaxi162Scf00220g00411 Petunia axillaris HOM05D006110 ORTHO05D007774 3.4e-214 748.8 660 62.7
FAN10G4343 Fragaria x ananassa HOM05D006110 ORTHO05D007774 6.4e-213 744.6 676 63.0
MD14G1003800 Malus domestica HOM05D006110 ORTHO05D007774 1.4e-212 743.4 656 63.1
FAN06G2813 Fragaria x ananassa HOM05D006110 ORTHO05D007774 7.1e-212 741.1 667 62.7
vmacro13769 Vaccinium macrocarpon HOM05D006110 ORTHO05D007774 1.7e-210 736.5 712 59.3
AL6G20270 Arabidopsis lyrata HOM05D006110 ORTHO05D007774 3.3e-209 732.3 653 61.3
Gohir.D04G016600 Gossypium hirsutum HOM05D006110 ORTHO05D007774 9.6e-209 730.7 653 61.6
TAR625G0603 Trochodendron aralioides HOM05D006110 ORTHO05D007774 2.1e-208 729.6 638 63.0
CARHR203490 Cardamine hirsuta HOM05D006110 ORTHO05D007774 4.0e-207 725.3 654 61.0
Aa31LG1G21560 Aethionema arabicum HOM05D006110 ORTHO05D007774 5.3e-207 724.9 650 60.6
AT5G09860 Arabidopsis thaliana HOM05D006110 ORTHO05D007774 1.2e-206 723.8 655 60.6
unitig_26.g9755 Utricularia gibba HOM05D006110 ORTHO05D007774 1.2e-206 723.8 619 65.1
Aqoxy3G04239 Aquilegia oxysepala HOM05D006110 ORTHO05D007774 4.5e-206 721.8 621 62.6
Nn8g38623 Nelumbo nucifera HOM05D006110 ORTHO05D007774 2.9e-205 719.2 658 61.2
Sp6g33550 Schrenkiella parvula HOM05D006110 ORTHO05D007774 4.9e-205 718.4 582 64.6
Lalb_Chr20g0109671 Lupinus albus HOM05D006110 ORTHO05D007774 1.1e-204 717.2 659 61.6
Carub.0006s0829 Capsella rubella HOM05D006110 ORTHO05D007774 1.9e-204 716.5 651 60.4
COL.COLO4_19610 Corchorus olitorius HOM05D006110 ORTHO05D007774 3.2e-204 715.7 678 59.6
Lalb_Chr20g0109811 Lupinus albus HOM05D006110 ORTHO05D007774 7.1e-204 714.5 659 61.5
PGR031G3177 Punica granatum HOM05D006110 ORTHO05D007774 3.5e-203 712.2 627 62.0
Nn3g19142 Nelumbo nucifera HOM05D006110 ORTHO05D007774 3.9e-202 708.8 561 66.7
PSO782G1399 Papaver somniferum HOM05D006110 ORTHO05D007774 3.3e-201 705.7 641 61.0
PSO063G0799 Papaver somniferum HOM05D006110 ORTHO05D007774 4.3e-201 705.3 641 60.7
BcaB05g21524 Brassica carinata HOM05D006110 ORTHO05D007774 5.6e-201 704.9 640 59.4
A02p00200 Brassica napus HOM05D006110 ORTHO05D007774 2.8e-200 702.6 654 59.5
ATR0618G428 Amborella trichopoda HOM05D006110 ORTHO05D007774 6.9e-199 698.0 640 60.0
MBI03_g05118_MAGBIO Magnolia biondii HOM05D006110 ORTHO05D007774 5.8e-198 694.9 639 59.6
Nitab4.5_0002838g0090 Nicotiana tabacum HOM05D006110 ORTHO05D007774 1.7e-197 693.3 558 66.3
Sabra01G0022800 Salix brachista HOM05D006110 ORTHO05D007774 2.2e-197 693.0 821 51.9
C02p04120 Brassica napus HOM05D006110 ORTHO05D007774 3.8e-197 692.2 672 57.7
BraA02t05004Z Brassica rapa HOM05D006110 ORTHO05D007774 1.1e-196 690.6 671 57.5
BolC2t06374H Brassica oleracea HOM05D006110 ORTHO05D007774 2.4e-196 689.5 673 56.8
Thhalv10013059m.g Eutrema salsugineum HOM05D006110 ORTHO05D007774 7.1e-196 688.0 650 59.4
AUR62033702 Chenopodium quinoa HOM05D006110 ORTHO05D007774 9.6e-193 677.6 745 55.2
BcaC03g13281 Brassica carinata HOM05D006110 ORTHO05D007774 1.8e-191 673.3 657 57.4
Oeu014626.1 Olea europaea HOM05D006110 ORTHO05D007774 5.3e-191 671.8 553 66.4
Os03g0110400 Oryza sativa ssp. japonica HOM05D006110 ORTHO05D007774 3.5e-187 659.1 639 57.6
Zm00001eb000780 Zea mays HOM05D006110 ORTHO05D007774 3.0e-186 656.0 652 57.1
CDE05G1199 Ceratophyllum demersum HOM05D006110 ORTHO05D007774 6.7e-186 654.8 608 58.7
Ah.08g212940 Amaranthus hybridus HOM05D006110 ORTHO05D007774 1.6e-184 650.2 654 56.7
SMO134G0202 Selaginella moellendorffii HOM05D006110 ORTHO05D007774 2.2e-173 613.2 578 57.1
Mapoly0007s0076 Marchantia polymorpha HOM05D006110 ORTHO05D007774 9.1e-167 591.3 589 53.7
AUR62036785 Chenopodium quinoa HOM05D006110 ORTHO05D007774 1.9e-164 583.6 655 53.7
AagrBONN_evm.TU.Sc2ySwM_228.3473 Anthoceros agrestis HOM05D006110 ORTHO05D007774 1.0e-162 577.8 647 50.4
Thecc.10G142600 Theobroma cacao HOM05D006110 ORTHO05D007774 4.4e-161 572.4 499 63.5
Pp3c2_4660 Physcomitrium patens HOM05D006110 ORTHO05D007774 8.2e-160 568.2 564 54.3
AagrBONN_evm.TU.Sc2ySwM_228.3474 Anthoceros agrestis HOM05D006110 ORTHO05D007774 4.5e-158 562.4 626 51.0
Cc00_g06110 Coffea canephora HOM05D006110 ORTHO05D007774 2.2e-152 543.5 494 61.3
ClCG05G014210 Citrullus lanatus HOM05D006110 ORTHO05D007774 3.1e-143 513.1 501 58.9
Lj9C658T8 Lonicera japonica HOM05D006110 ORTHO05D007774 1.8e-127 460.7 302 79.8
TPR.G1403 Trifolium pratense HOM05D006110 ORTHO05D007774 1.5e-124 451.1 436 58.9
HPP92_005051 Vanilla planifolia HOM05D006110 ORTHO05D007774 5.4e-119 432.6 323 69.0
SEGI_32708 Sequoiadendron giganteum HOM05D006110 ORTHO05D007774 1.5e-116 424.5 324 68.5
DCAR_022366 Daucus carota HOM05D006110 ORTHO05D007774 2.7e-110 403.7 447 54.1
CBR_g45491 Chara braunii HOM05D006110 ORTHO05D007774 8.9e-106 388.7 565 41.4
Nitab4.5_0004168g0080 Nicotiana tabacum HOM05D006110 ORTHO05D007774 1.5e-105 387.9 359 61.0
Cpa.g.sc51.83 Carica papaya HOM05D006110 ORTHO05D007774 2.1e-91 340.9 311 59.2
Hund24435 Selenicereus undatus HOM05D006110 ORTHO05D007774 3.0e-85 320.5 250 68.4
Sed0017067 Sechium edule HOM05D006110 ORTHO05D007774 1.0e-72 278.9 196 73.0
Hund12548 Selenicereus undatus HOM05D006110 ORTHO05D007774 1.2e-70 271.9 291 52.9
HPP92_005075 Vanilla planifolia HOM05D006110 ORTHO05D007774 5.7e-68 263.1 319 48.0
PRCOL_00001172 Prasinoderma coloniale HOM05D006110 ORTHO05D007774 1.9e-63 248.1 481 32.6
Cc00_g06120 Coffea canephora HOM05D006110 ORTHO05D007774 7.9e-54 216.1 144 77.1
Lj9A658T58 Lonicera japonica HOM05D006110 ORTHO05D007774 1.4e-53 215.3 195 61.5
CANSAT01G0073 Cannabis sativa HOM05D006110 ORTHO05D007774 6.5e-48 196.4 153 64.7
CDE05G3545 Ceratophyllum demersum HOM05D006110 ORTHO05D007774 1.7e-43 181.8 148 65.5
SEGI_24206 Sequoiadendron giganteum HOM05D006110 ORTHO05D007774 2.2e-43 181.4 179 57.0
Oeu014625.1 Olea europaea HOM05D006110 ORTHO05D007774 5.7e-36 156.8 162 61.1
CANSAT01G1515 Cannabis sativa HOM05D006110 ORTHO05D007774 4.5e-33 147.1 145 53.1
ClCG05G014240 Citrullus lanatus HOM05D006110 ORTHO05D007774 2.7e-30 137.9 185 47.6
Lj9C658T10 Lonicera japonica HOM05D006110 ORTHO05D007774 3.8e-24 117.5 66 78.8
CDE05G0354 Ceratophyllum demersum HOM05D006110 ORTHO05D007774 1.6e-22 112.1 376 28.5
Actinidia06221 Actinidia chinensis HOM05D006110 ORTHO05D007774 6.1e-22 110.2 177 46.3
SEGI_05467 Sequoiadendron giganteum HOM05D006110 ORTHO05D007774 6.3e-19 100.1 69 60.9
Cre16.g695300 Chlamydomonas reinhardtii HOM05D006110 ORTHO05D007774 1.6e-17 95.5 487 23.4


User provided reference genes

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