Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold338G49246 Striga asiatica HOM05D006543 ORTHO05D008308 2.7e-266 921.4 456 100.0
Migut.I00467 Erythranthe guttata HOM05D006543 ORTHO05D008308 1.1e-166 590.5 493 62.9
MSTRG.11294 Avicennia marina HOM05D006543 ORTHO05D008308 7.9e-165 584.3 459 65.4
Cc04_g10340 Coffea canephora HOM05D006543 ORTHO05D008308 6.7e-164 581.3 450 63.8
PGSC0003DMG400015239 Solanum tuberosum HOM05D006543 ORTHO05D008308 1.3e-162 577.0 477 63.3
Sopen03g030490 Solanum pennellii HOM05D006543 ORTHO05D008308 2.8e-162 575.9 477 63.3
Oeu045480.1 Olea europaea HOM05D006543 ORTHO05D008308 8.2e-162 574.3 456 64.3
Solyc03g111360.3 Solanum lycopersicum HOM05D006543 ORTHO05D008308 8.2e-162 574.3 477 63.3
QL10p005246 Quercus lobata HOM05D006543 ORTHO05D008308 1.8e-161 573.2 462 63.0
Nitab4.5_0004750g0040 Nicotiana tabacum HOM05D006543 ORTHO05D008308 5.3e-161 571.6 476 63.0
CAN.G352.10 Capsicum annuum HOM05D006543 ORTHO05D008308 1.0e-159 567.4 450 64.0
vmacro16708 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 1.0e-159 567.4 443 65.2
Actinidia37252 Actinidia chinensis HOM05D006543 ORTHO05D008308 1.7e-159 566.6 464 63.4
COL.COLO4_09265 Corchorus olitorius HOM05D006543 ORTHO05D008308 5.0e-159 565.1 465 61.3
Sabra12G0067500 Salix brachista HOM05D006543 ORTHO05D008308 1.4e-158 563.5 452 63.1
Nitab4.5_0003282g0090 Nicotiana tabacum HOM05D006543 ORTHO05D008308 4.2e-158 562.0 442 65.2
Thecc.03G122600 Theobroma cacao HOM05D006543 ORTHO05D008308 4.2e-158 562.0 440 63.0
TWI14G0972 Tripterygium wilfordii HOM05D006543 ORTHO05D008308 5.5e-158 561.6 466 60.5
RcHm_v2.0_Chr7g0191211 Rosa chinensis HOM05D006543 ORTHO05D008308 1.2e-157 560.5 448 63.2
Atru.chr9.1008 Acer truncatum HOM05D006543 ORTHO05D008308 3.6e-157 558.9 476 60.3
Manes.06G115100 Manihot esculenta HOM05D006543 ORTHO05D008308 3.6e-157 558.9 481 60.3
Rhsim12G0172000 Rhododendron simsii HOM05D006543 ORTHO05D008308 1.8e-156 556.6 462 61.3
Hund18538 Selenicereus undatus HOM05D006543 ORTHO05D008308 2.3e-156 556.2 466 61.6
MD14G1163800 Malus domestica HOM05D006543 ORTHO05D008308 3.9e-156 555.4 443 63.0
Potri.012G092900 Populus trichocarpa HOM05D006543 ORTHO05D008308 5.1e-156 555.1 483 59.8
Prupe.5G157200 Prunus persica HOM05D006543 ORTHO05D008308 5.1e-156 555.1 445 62.0
Haze_07303 Corylus avellana HOM05D006543 ORTHO05D008308 8.8e-156 554.3 464 60.6
Hma1.2p1_0046F.1_g027560 Hydrangea macrophylla HOM05D006543 ORTHO05D008308 8.8e-156 554.3 477 60.0
HanXRQChr05g0154751 Helianthus annuus HOM05D006543 ORTHO05D008308 1.1e-155 553.9 442 62.0
CANSAT80G2173 Cannabis sativa HOM05D006543 ORTHO05D008308 1.5e-155 553.5 481 60.5
Lj5A100T59 Lonicera japonica HOM05D006543 ORTHO05D008308 2.6e-155 552.7 465 61.7
Gorai.006G270300 Gossypium raimondii HOM05D006543 ORTHO05D008308 3.3e-155 552.4 442 62.7
Lsat_1_v5_gn_5_13221 Lactuca sativa HOM05D006543 ORTHO05D008308 7.4e-155 551.2 470 60.9
Peaxi162Scf00089g00625 Petunia axillaris HOM05D006543 ORTHO05D008308 7.4e-155 551.2 473 61.5
CiPaw.11G012100 Carya illinoinensis HOM05D006543 ORTHO05D008308 1.7e-154 550.1 459 62.5
CSS0036636 Camellia sinensis var. sinensis HOM05D006543 ORTHO05D008308 2.8e-154 549.3 443 62.8
GSVIVG01007545001 Vitis vinifera HOM05D006543 ORTHO05D008308 2.8e-154 549.3 463 60.7
ECA246G2708 Erigeron canadensis HOM05D006543 ORTHO05D008308 3.7e-154 548.9 445 62.9
BcaNung06574 Brassica carinata HOM05D006543 ORTHO05D008308 4.8e-154 548.5 447 61.5
Sed0023544 Sechium edule HOM05D006543 ORTHO05D008308 4.8e-154 548.5 464 61.0
Duzib068G0092 Durio zibethinus HOM05D006543 ORTHO05D008308 6.3e-154 548.1 476 59.5
AUR62001276 Chenopodium quinoa HOM05D006543 ORTHO05D008308 1.1e-153 547.4 461 61.2
Ciclev10020014m.g Citrus clementina HOM05D006543 ORTHO05D008308 1.1e-153 547.4 475 59.8
Gohir.A09G244900 Gossypium hirsutum HOM05D006543 ORTHO05D008308 1.1e-153 547.4 444 62.2
TAR374G1424 Trochodendron aralioides HOM05D006543 ORTHO05D008308 1.1e-153 547.4 471 59.9
PGR044G1877 Punica granatum HOM05D006543 ORTHO05D008308 1.4e-153 547.0 467 60.6
FvH4_5g07331 Fragaria vesca HOM05D006543 ORTHO05D008308 1.2e-152 543.9 447 62.2
Carub.0008s2404 Capsella rubella HOM05D006543 ORTHO05D008308 1.5e-152 543.5 444 60.8
AUR62025730 Chenopodium quinoa HOM05D006543 ORTHO05D008308 1.5e-152 543.5 477 58.9
AL8G40370 Arabidopsis lyrata HOM05D006543 ORTHO05D008308 2.0e-152 543.1 448 59.8
Thhalv10004112m.g Eutrema salsugineum HOM05D006543 ORTHO05D008308 2.0e-152 543.1 444 60.8
Aqoxy5G03584 Aquilegia oxysepala HOM05D006543 ORTHO05D008308 2.6e-152 542.7 468 59.6
Glyma.04G192800 Glycine max HOM05D006543 ORTHO05D008308 4.5e-152 542.0 439 61.3
MELO3C026233.2 Cucumis melo HOM05D006543 ORTHO05D008308 2.2e-151 539.7 481 58.0
BolC9t53839H Brassica oleracea HOM05D006543 ORTHO05D008308 2.9e-151 539.3 447 60.9
CsaV3_1G000810 Cucumis sativus L. HOM05D006543 ORTHO05D008308 2.9e-151 539.3 467 59.1
EL10Ac7g18072 Beta vulgaris HOM05D006543 ORTHO05D008308 3.8e-151 538.9 470 60.2
THA.LOC104818195 Tarenaya hassleriana HOM05D006543 ORTHO05D008308 5.0e-151 538.5 482 57.7
AT5G63290 Arabidopsis thaliana HOM05D006543 ORTHO05D008308 8.5e-151 537.7 479 57.0
Phvul.009G169000 Phaseolus vulgaris HOM05D006543 ORTHO05D008308 8.5e-151 537.7 453 60.9
Aa31LG1G18710 Aethionema arabicum HOM05D006543 ORTHO05D008308 1.1e-150 537.3 443 60.5
C09p09260 Brassica napus HOM05D006543 ORTHO05D008308 1.9e-150 536.6 447 60.6
A09p08200 Brassica napus HOM05D006543 ORTHO05D008308 2.5e-150 536.2 449 61.0
BraA09t36471Z Brassica rapa HOM05D006543 ORTHO05D008308 3.2e-150 535.8 449 61.0
Sp2g26410 Schrenkiella parvula HOM05D006543 ORTHO05D008308 5.5e-150 535.0 447 59.3
Zm00001eb001600 Zea mays HOM05D006543 ORTHO05D008308 1.2e-149 533.9 469 59.5
Medtr3g075110 Medicago truncatula HOM05D006543 ORTHO05D008308 1.6e-149 533.5 474 58.0
Psat5g141840 Pisum sativum HOM05D006543 ORTHO05D008308 2.1e-149 533.1 451 59.4
Lalb_Chr08g0236931 Lupinus albus HOM05D006543 ORTHO05D008308 7.9e-149 531.2 439 61.3
Sc04g0000970 Simmondsia chinensis HOM05D006543 ORTHO05D008308 8.8e-148 527.7 446 60.8
arahy.Tifrunner.gnm1.ann1.8LT8QW Arachis hypogaea HOM05D006543 ORTHO05D008308 4.4e-147 525.4 421 61.5
MBI06_g38704_MAGBIO Magnolia biondii HOM05D006543 ORTHO05D008308 9.7e-147 524.2 486 58.0
Lj1g0002208 Lotus japonicus HOM05D006543 ORTHO05D008308 1.3e-146 523.9 451 59.0
arahy.Tifrunner.gnm1.ann1.YD5AXN Arachis hypogaea HOM05D006543 ORTHO05D008308 4.8e-146 521.9 422 61.4
ClCG06G017630 Citrullus lanatus HOM05D006543 ORTHO05D008308 2.6e-144 516.2 471 57.3
Os12g0270100 Oryza sativa ssp. japonica HOM05D006543 ORTHO05D008308 6.5e-143 511.5 423 60.3
TPR.G24245 Trifolium pratense HOM05D006543 ORTHO05D008308 1.1e-142 510.8 448 58.3
PSO729G0022 Papaver somniferum HOM05D006543 ORTHO05D008308 1.5e-139 500.4 447 58.4
unitig_22.g5878 Utricularia gibba HOM05D006543 ORTHO05D008308 9.1e-137 491.1 386 62.7
CDE04G0939 Ceratophyllum demersum HOM05D006543 ORTHO05D008308 1.1e-134 484.2 445 56.9
Ah.15g095320 Amaranthus hybridus HOM05D006543 ORTHO05D008308 7.2e-134 481.5 442 57.5
Lsat_1_v5_gn_4_53181 Lactuca sativa HOM05D006543 ORTHO05D008308 4.0e-132 475.7 484 53.9
Gohir.D09G245800 Gossypium hirsutum HOM05D006543 ORTHO05D008308 9.8e-131 471.1 372 62.6
SEGI_06622 Sequoiadendron giganteum HOM05D006543 ORTHO05D008308 9.8e-123 444.5 479 48.9
Dinv11106 Davidia involucrata HOM05D006543 ORTHO05D008308 8.6e-119 431.4 319 67.1
Ca_16091_v3 Cicer arietinum L. HOM05D006543 ORTHO05D008308 5.6e-118 428.7 338 62.4
Pp3c13_23570 Physcomitrium patens HOM05D006543 ORTHO05D008308 1.8e-116 423.7 415 50.1
FvH4_5g07462 Fragaria vesca HOM05D006543 ORTHO05D008308 4.0e-116 422.5 368 59.8
SMO364G0036 Selaginella moellendorffii HOM05D006543 ORTHO05D008308 6.4e-114 415.2 412 50.7
VMungo1309G1872 Vigna mungo HOM05D006543 ORTHO05D008308 4.6e-112 409.1 315 62.2
Mapoly0005s0190 Marchantia polymorpha HOM05D006543 ORTHO05D008308 3.1e-108 396.4 514 41.8
Cre03.g171461 Chlamydomonas reinhardtii HOM05D006543 ORTHO05D008308 1.9e-102 377.1 383 49.9
PRCOL_00001606 Prasinoderma coloniale HOM05D006543 ORTHO05D008308 6.4e-98 362.1 428 45.6
CBR_g58805 Chara braunii HOM05D006543 ORTHO05D008308 1.2e-93 347.8 389 45.0
ATR0733G153 Amborella trichopoda HOM05D006543 ORTHO05D008308 1.3e-90 337.8 360 50.0
AagrBONN_evm.TU.Sc2ySwM_344.2040 Anthoceros agrestis HOM05D006543 ORTHO05D008308 8.4e-90 335.1 396 44.2
vmacro23154 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 1.9e-86 323.9 255 63.1
MCO01G029 Micromonas commoda HOM05D006543 ORTHO05D008308 7.6e-83 312.0 445 42.9
BcaB04g19911 Brassica carinata HOM05D006543 ORTHO05D008308 1.3e-79 301.2 231 65.8
CARHR277150 Cardamine hirsuta HOM05D006543 ORTHO05D008308 5.1e-79 299.3 243 62.6
Nn3g16581 Nelumbo nucifera HOM05D006543 ORTHO05D008308 2.8e-77 293.5 247 60.7
vmacro16659 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 4.8e-77 292.7 307 53.4
Glyma.06G173133 Glycine max HOM05D006543 ORTHO05D008308 1.3e-74 284.6 238 58.4
CSS0033277 Camellia sinensis var. sinensis HOM05D006543 ORTHO05D008308 2.4e-73 280.4 299 51.2
Actinidia36787 Actinidia chinensis HOM05D006543 ORTHO05D008308 9.3e-65 251.9 246 53.7
CARHR277160 Cardamine hirsuta HOM05D006543 ORTHO05D008308 1.5e-62 244.6 210 55.7
MD06G1157200 Malus domestica HOM05D006543 ORTHO05D008308 1.4e-57 228.0 204 59.8
BcaB01g05367 Brassica carinata HOM05D006543 ORTHO05D008308 1.5e-51 208.0 204 53.4
SEGI_28812 Sequoiadendron giganteum HOM05D006543 ORTHO05D008308 8.5e-50 202.2 195 52.3
Oeu045471.1 Olea europaea HOM05D006543 ORTHO05D008308 4.3e-46 189.9 118 72.9
Oeu037566.1 Olea europaea HOM05D006543 ORTHO05D008308 4.1e-44 183.3 118 72.0
Glyma.06G173067 Glycine max HOM05D006543 ORTHO05D008308 1.8e-39 167.9 165 55.2
CAN.G352.9 Capsicum annuum HOM05D006543 ORTHO05D003127 1.1e-33 148.7 114 67.5
MD06G1156000 Malus domestica HOM05D006543 ORTHO05D008308 4.7e-24 116.7 115 48.7
FvH4_5g07400 Fragaria vesca HOM05D006543 ORTHO05D008308 8.0e-24 115.9 110 55.5
CAN.G352.8 Capsicum annuum HOM05D006543 ORTHO05D008308 2.6e-22 110.9 99 58.6
Cfa009975 Carpinus fangiana HOM05D006543 ORTHO05D008308 5.2e-07 60.1 44 63.6


User provided reference genes

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