Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold31G12915 Striga asiatica HOM05D005614 ORTHO05D006759 3.6e-191 671.4 338 100.0
SalBow7G1071 Salvia bowleyana HOM05D005614 ORTHO05D006759 1.9e-107 393.3 308 69.2
Migut.D01926 Erythranthe guttata HOM05D005614 ORTHO05D006759 6.6e-100 368.2 207 87.9
Lsat_1_v5_gn_3_69700 Lactuca sativa HOM05D005614 ORTHO05D006759 3.8e-95 352.4 291 66.7
SalBow3G0912 Salvia bowleyana HOM05D005614 ORTHO05D006759 5.1e-92 342.0 207 82.6
PGSC0003DMG400026996 Solanum tuberosum HOM05D005614 ORTHO05D006759 6.2e-90 335.1 208 81.7
Peaxi162Scf00689g00225 Petunia axillaris HOM05D005614 ORTHO05D006759 1.4e-89 334.0 271 68.6
Solyc06g071450.4 Solanum lycopersicum HOM05D005614 ORTHO05D006759 1.4e-89 334.0 208 81.2
Sopen06g027730 Solanum pennellii HOM05D005614 ORTHO05D006759 4.0e-89 332.4 208 80.8
CAN.G628.77 Capsicum annuum HOM05D005614 ORTHO05D006759 2.6e-88 329.7 209 80.4
Dinv07241 Davidia involucrata HOM05D005614 ORTHO05D006759 3.4e-88 329.3 208 80.8
Nitab4.5_0000003g0570 Nicotiana tabacum HOM05D005614 ORTHO05D006759 1.4e-86 323.9 228 75.4
Oeu024691.1 Olea europaea HOM05D005614 ORTHO05D006759 2.4e-86 323.2 191 81.2
Nitab4.5_0001017g0060 Nicotiana tabacum HOM05D005614 ORTHO05D006759 1.6e-85 320.5 228 74.6
Nitab4.5_0000866g0090 Nicotiana tabacum HOM05D005614 ORTHO05D006759 2.1e-85 320.1 228 74.6
CSS0020697 Camellia sinensis var. sinensis HOM05D005614 ORTHO05D006759 4.6e-85 318.9 209 78.0
Actinidia03480 Actinidia chinensis HOM05D005614 ORTHO05D006759 6.0e-85 318.5 208 79.3
CSS0036035 Camellia sinensis var. sinensis HOM05D005614 ORTHO05D006759 6.0e-85 318.5 208 78.4
Eucgr.G01112 Eucalyptus grandis HOM05D005614 ORTHO05D006759 1.7e-84 317.0 290 60.0
Rhsim11G0047100 Rhododendron simsii HOM05D005614 ORTHO05D006759 3.9e-84 315.8 209 79.9
RhsimUnG0093400 Rhododendron simsii HOM05D005614 ORTHO05D006759 8.7e-84 314.7 209 78.5
DCAR_017415 Daucus carota HOM05D005614 ORTHO05D006759 1.5e-83 313.9 207 77.8
Cc04_g13870 Coffea canephora HOM05D005614 ORTHO05D006759 5.6e-83 312.0 207 79.2
Nn8g39974 Nelumbo nucifera HOM05D005614 ORTHO05D006759 1.3e-82 310.8 285 59.6
ECA246G0276 Erigeron canadensis HOM05D005614 ORTHO05D006759 2.0e-80 303.5 207 75.8
HanXRQChr16g0532671 Helianthus annuus HOM05D005614 ORTHO05D006759 3.4e-80 302.8 207 75.4
HanXRQChr02g0053121 Helianthus annuus HOM05D005614 ORTHO05D006759 7.6e-80 301.6 207 74.9
vmacro14329 Vaccinium macrocarpon HOM05D005614 ORTHO05D006759 2.2e-79 300.1 216 74.5
GSVIVG01008884001 Vitis vinifera HOM05D005614 ORTHO05D006759 1.9e-78 297.0 215 72.6
Hund27024 Selenicereus undatus HOM05D005614 ORTHO05D006759 9.3e-78 294.7 218 68.8
MD15G1351400 Malus domestica HOM05D005614 ORTHO05D006759 1.2e-77 294.3 215 72.1
CANSAT54G1242 Cannabis sativa HOM05D005614 ORTHO05D006759 2.1e-77 293.5 210 72.4
PGR042G1492 Punica granatum HOM05D005614 ORTHO05D006759 7.9e-77 291.6 214 70.1
Ah.05g170870 Amaranthus hybridus HOM05D005614 ORTHO05D006759 1.0e-76 291.2 218 67.4
Potri.005G176600 Populus trichocarpa HOM05D005614 ORTHO05D006759 1.8e-76 290.4 216 71.8
EL10Ac1g01047 Beta vulgaris HOM05D005614 ORTHO05D006759 2.3e-76 290.0 223 67.7
Prupe.1G500100 Prunus persica HOM05D005614 ORTHO05D006759 6.7e-76 288.5 214 71.0
RcHm_v2.0_Chr6g0295621 Rosa chinensis HOM05D005614 ORTHO05D006759 6.7e-76 288.5 214 70.1
Manes.02G162200 Manihot esculenta HOM05D005614 ORTHO05D006759 1.5e-75 287.3 235 66.0
AUR62027890 Chenopodium quinoa HOM05D005614 ORTHO05D006759 1.9e-75 287.0 221 65.6
Cpa.g.sc36.54 Carica papaya HOM05D005614 ORTHO05D006759 2.5e-75 286.6 214 70.1
CiPaw.05G223000 Carya illinoinensis HOM05D005614 ORTHO05D006759 2.5e-75 286.6 214 70.6
FvH4_2g26720 Fragaria vesca HOM05D005614 ORTHO05D006759 3.3e-75 286.2 214 69.6
THA.LOC104806819 Tarenaya hassleriana HOM05D005614 ORTHO05D006759 3.7e-74 282.7 214 68.2
Sc01g0001200 Simmondsia chinensis HOM05D005614 ORTHO05D006759 4.8e-74 282.3 227 65.2
Gohir.A05G234600 Gossypium hirsutum HOM05D005614 ORTHO05D006759 2.4e-73 280.0 219 67.6
QL09p035347 Quercus lobata HOM05D005614 ORTHO05D006759 2.4e-73 280.0 217 68.7
Ciclev10002002m.g Citrus clementina HOM05D005614 ORTHO05D006759 3.1e-73 279.6 219 67.6
Sp1g16310 Schrenkiella parvula HOM05D005614 ORTHO05D006759 1.2e-72 277.7 217 67.3
PSO782G2082 Papaver somniferum HOM05D005614 ORTHO05D006759 2.0e-72 276.9 218 65.1
CsaV3_2G009350 Cucumis sativus L. HOM05D005614 ORTHO05D006759 2.6e-72 276.6 214 68.2
Thecc.08G123600 Theobroma cacao HOM05D005614 ORTHO05D006759 2.6e-72 276.6 219 67.1
PSO170G2981 Papaver somniferum HOM05D005614 ORTHO05D006759 3.4e-72 276.2 218 64.2
TWI79G0333 Tripterygium wilfordii HOM05D005614 ORTHO05D006759 3.4e-72 276.2 214 68.7
Atru.chr13.1437_Atru.chr13.1438 Acer truncatum HOM05D005614 ORTHO05D006759 5.8e-72 275.4 219 66.2
FAN20G0890 Fragaria x ananassa HOM05D005614 ORTHO05D006759 9.9e-72 274.6 212 67.9
TAR628G1424 Trochodendron aralioides HOM05D005614 ORTHO05D006759 9.9e-72 274.6 218 67.0
BcaB03g12976 Brassica carinata HOM05D005614 ORTHO05D006759 3.8e-71 272.7 217 66.4
Gorai.009G245300 Gossypium raimondii HOM05D005614 ORTHO05D006759 3.8e-71 272.7 219 66.7
BcaB07g31845 Brassica carinata HOM05D005614 ORTHO05D006759 4.9e-71 272.3 217 65.9
Sed0025863 Sechium edule HOM05D005614 ORTHO05D006759 4.9e-71 272.3 214 67.3
Thhalv10008316m.g Eutrema salsugineum HOM05D005614 ORTHO05D006759 6.4e-71 271.9 217 65.9
CARHR138110 Cardamine hirsuta HOM05D005614 ORTHO05D006759 1.4e-70 270.8 216 66.7
BolC8t49486H Brassica oleracea HOM05D005614 ORTHO05D006759 2.4e-70 270.0 217 65.4
Aqoxy7G02121 Aquilegia oxysepala HOM05D005614 ORTHO05D006759 5.5e-70 268.9 220 65.5
BraA06t24565Z Brassica rapa HOM05D005614 ORTHO05D006759 1.2e-69 267.7 217 65.4
C05p16610 Brassica napus HOM05D005614 ORTHO05D006759 2.1e-69 266.9 217 65.9
A06p14370 Brassica napus HOM05D005614 ORTHO05D006759 2.7e-69 266.5 217 65.9
CARHR018930 Cardamine hirsuta HOM05D005614 ORTHO05D006759 3.5e-69 266.2 214 66.4
BolC5t30360H Brassica oleracea HOM05D005614 ORTHO05D006759 7.9e-69 265.0 217 65.9
Duzib093G1836 Durio zibethinus HOM05D005614 ORTHO05D006759 1.0e-68 264.6 246 60.2
BcaC05g25728 Brassica carinata HOM05D005614 ORTHO05D006759 1.3e-68 264.2 219 64.4
AT1G18340 Arabidopsis thaliana HOM05D005614 ORTHO05D006759 1.8e-68 263.8 218 65.1
Lj1g0021555 Lotus japonicus HOM05D005614 ORTHO05D006759 1.8e-68 263.8 215 65.6
AL1G30720 Arabidopsis lyrata HOM05D005614 ORTHO05D006759 2.3e-68 263.5 218 65.6
ATR0684G165 Amborella trichopoda HOM05D005614 ORTHO05D006759 3.0e-68 263.1 216 61.6
Carub.0001s1797 Capsella rubella HOM05D005614 ORTHO05D006759 8.7e-68 261.5 218 64.2
C08p18540 Brassica napus HOM05D005614 ORTHO05D006759 1.5e-67 260.8 207 66.7
Aa31LG6G9300 Aethionema arabicum HOM05D005614 ORTHO05D006759 1.9e-67 260.4 214 63.6
FAN15G2492 Fragaria x ananassa HOM05D005614 ORTHO05D006759 2.5e-67 260.0 235 61.3
BraA08t34975Z Brassica rapa HOM05D005614 ORTHO05D006759 3.3e-67 259.6 211 64.5
A08p30430 Brassica napus HOM05D005614 ORTHO05D006759 4.3e-67 259.2 208 65.4
FAN27G1664 Fragaria x ananassa HOM05D005614 ORTHO05D006759 4.3e-67 259.2 235 61.3
HPP92_013333 Vanilla planifolia HOM05D005614 ORTHO05D006759 5.6e-67 258.8 225 60.4
Lalb_Chr23g0270981 Lupinus albus HOM05D005614 ORTHO05D006759 6.2e-66 255.4 217 64.5
ClCG08G005590 Citrullus lanatus HOM05D005614 ORTHO05D006759 1.1e-65 254.6 251 57.8
Glyma.06G112400 Glycine max HOM05D005614 ORTHO05D006759 1.1e-65 254.6 217 63.6
arahy.Tifrunner.gnm1.ann1.2VS3GS Arachis hypogaea HOM05D005614 ORTHO05D006759 1.4e-65 254.2 220 63.6
Ca_15193_v3 Cicer arietinum L. HOM05D005614 ORTHO05D006759 1.4e-65 254.2 216 62.0
Glyma.04G250400 Glycine max HOM05D005614 ORTHO05D006759 5.3e-65 252.3 217 63.1
arahy.Tifrunner.gnm1.ann1.MKV7IN Arachis hypogaea HOM05D005614 ORTHO05D006759 6.9e-65 251.9 220 63.2
Medtr3g072430 Medicago truncatula HOM05D005614 ORTHO05D006759 1.2e-64 251.1 214 64.0
Phvul.009G124300 Phaseolus vulgaris HOM05D005614 ORTHO05D006759 2.6e-64 250.0 214 62.6
Sed0022578 Sechium edule HOM05D005614 ORTHO05D006759 2.6e-64 250.0 226 61.5
vmacro00825 Vaccinium macrocarpon HOM05D005614 ORTHO05D006759 3.4e-64 249.6 225 64.4
Os02g0125800 Oryza sativa ssp. japonica HOM05D005614 ORTHO05D006759 2.2e-63 246.9 210 60.5
Sabra05G0133300 Salix brachista HOM05D005614 ORTHO05D006759 2.2e-63 246.9 345 47.0
Zm00001eb208710 Zea mays HOM05D005614 ORTHO05D006759 7.4e-59 231.9 217 56.7
COL.COLO4_35944 Corchorus olitorius HOM05D005614 ORTHO05D006759 1.4e-57 227.6 177 68.4
AUR62019050 Chenopodium quinoa HOM05D005614 ORTHO05D006759 1.0e-55 221.5 221 54.8
CDE06G0499 Ceratophyllum demersum HOM05D005614 ORTHO05D006759 3.8e-55 219.5 183 61.7
Haze_00457 Corylus avellana HOM05D005614 ORTHO05D006759 5.0e-55 219.2 175 65.7
MBI03_g33030_MAGBIO Magnolia biondii HOM05D005614 ORTHO05D006759 6.5e-55 218.8 299 46.2
Mapoly0044s0012 Marchantia polymorpha HOM05D005614 ORTHO05D006759 1.1e-54 218.0 217 51.2
Duzib041G0760 Durio zibethinus HOM05D005614 ORTHO05D006759 7.9e-53 211.8 219 56.2
BcaNung05442 Brassica carinata HOM05D005614 ORTHO05D006759 2.2e-50 203.8 179 61.5
Pp3c2_3680 Physcomitrium patens HOM05D005614 ORTHO05D006759 9.1e-49 198.4 225 48.9
TPR.G24041 Trifolium pratense HOM05D005614 ORTHO05D006759 4.5e-48 196.1 177 60.5
FAN24G3468 Fragaria x ananassa HOM05D005614 ORTHO05D006759 1.3e-47 194.5 203 56.7
MELO3C008774.2 Cucumis melo HOM05D005614 ORTHO05D006759 2.0e-43 180.6 120 76.7
TWI75G0111 Tripterygium wilfordii HOM05D005614 ORTHO05D006759 3.3e-43 179.9 202 54.0
Gohir.D05G236900 Gossypium hirsutum HOM05D005614 ORTHO05D006759 1.1e-41 174.9 125 72.0
Psat5g132360 Pisum sativum HOM05D005614 ORTHO05D006759 3.1e-41 173.3 163 58.3
Lj4A622G16 Lonicera japonica HOM05D005614 ORTHO05D006759 9.7e-35 151.8 117 71.8
CBR_g36358 Chara braunii HOM05D005614 ORTHO05D006759 4.1e-33 146.4 234 37.6
Oeu022164.1 Olea europaea HOM05D005614 ORTHO05D006759 3.5e-32 143.3 88 77.3
SEGI_10746 Sequoiadendron giganteum HOM05D005614 ORTHO05D006759 5.9e-32 142.5 152 48.7
Lj4A622G15 Lonicera japonica HOM05D005614 ORTHO05D006759 4.4e-27 126.3 66 90.9
SMO358G0086 Selaginella moellendorffii HOM05D005614 ORTHO05D006759 2.8e-26 123.6 157 45.9
QL09p036498 Quercus lobata HOM05D005614 ORTHO05D006759 1.7e-23 114.4 67 83.6
CAN.G964.16 Capsicum annuum HOM05D005614 ORTHO05D006759 2.9e-23 113.6 96 64.6
SEGI_11087 Sequoiadendron giganteum HOM05D005614 ORTHO05D006759 8.5e-23 112.1 73 71.2
TPR.G40310 Trifolium pratense HOM05D001808 ORTHO05D001747 1.9e-22 110.9 67 76.1
RhsimUnG0102200 Rhododendron simsii HOM05D005614 ORTHO05D006759 4.1e-17 93.2 82 64.6
Cre03.g172050 Chlamydomonas reinhardtii HOM05D005614 ORTHO05D006759 3.8e-15 86.7 240 28.8
Rhsim02G0185400 Rhododendron simsii HOM05D005614 ORTHO05D006759 1.1e-14 85.1 79 64.6
SalBow3G3353 Salvia bowleyana HOM05D005614 ORTHO05D006759 2.8e-13 80.5 65 61.5
CDE12G0551 Ceratophyllum demersum HOM05D005614 ORTHO05D006759 1.0e-12 78.6 49 81.6
Cfa025530 Carpinus fangiana HOM05D005614 ORTHO05D006759 5.2e-12 76.3 232 26.7
MCO01G384 Micromonas commoda HOM05D005614 ORTHO05D006759 1.5e-11 74.7 170 31.8
Ca_31116_v3 Cicer arietinum L. HOM05D005614 ORTHO05D006759 2.6e-11 73.9 92 47.8
Rhsim03G0117800 Rhododendron simsii HOM05D005614 ORTHO05D006759 7.8e-08 62.4 83 45.8
Psat5g132400 Pisum sativum HOM05D005614 ORTHO05D006759 8.6e-07 58.9 41 70.7


User provided reference genes

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