Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold28G12032 Striga asiatica HOM05D000006 ORTHO05D004030 2.3e-193 678.7 333 100.0
Nitab4.5_0002496g0060 Nicotiana tabacum HOM05D000006 ORTHO05D004030 2.8e-135 485.7 407 66.1
Nn1g05200 Nelumbo nucifera HOM05D000006 ORTHO05D004030 3.1e-134 482.3 405 65.9
unitig_21.g20189 Utricularia gibba HOM05D000006 ORTHO05D004030 5.3e-134 481.5 341 74.5
MSTRG.24147 Avicennia marina HOM05D000006 ORTHO05D004030 6.9e-134 481.1 341 74.8
Sopen11g008540 Solanum pennellii HOM05D000006 ORTHO05D004030 9.0e-134 480.7 407 65.8
MSTRG.22428 Avicennia marina HOM05D000006 ORTHO05D004030 1.5e-133 479.9 341 74.5
SalBow7G0198 Salvia bowleyana HOM05D000006 ORTHO05D004030 2.0e-133 479.6 413 63.9
SalBow7G3631 Salvia bowleyana HOM05D000006 ORTHO05D004030 2.0e-133 479.6 413 63.9
Solyc11g013520.3 Solanum lycopersicum HOM05D000006 ORTHO05D004030 2.6e-133 479.2 343 74.1
Oeu001989.1 Olea europaea HOM05D000006 ORTHO05D004030 1.3e-132 476.9 412 64.3
Ciclev10001133m.g Citrus clementina HOM05D000006 ORTHO05D004030 2.9e-132 475.7 341 73.9
Migut.N03322 Erythranthe guttata HOM05D000006 ORTHO05D004030 2.9e-132 475.7 342 73.4
SalBow6G6076 Salvia bowleyana HOM05D000006 ORTHO05D004030 2.9e-132 475.7 338 74.3
CiPaw.05G229200 Carya illinoinensis HOM05D000006 ORTHO05D004030 3.8e-132 475.3 420 63.8
Atru.chr13.1315 Acer truncatum HOM05D000006 ORTHO05D004030 4.9e-132 474.9 341 73.6
Atru.chr13.1359 Acer truncatum HOM05D000006 ORTHO05D004030 4.9e-132 474.9 341 73.6
Cfa015957 Carpinus fangiana HOM05D000006 ORTHO05D004030 6.4e-132 474.6 341 73.6
CiPaw.06G024600 Carya illinoinensis HOM05D000006 ORTHO05D004030 6.4e-132 474.6 341 73.6
Haze_00526 Corylus avellana HOM05D000006 ORTHO05D004030 6.4e-132 474.6 341 73.6
Dinv27386 Davidia involucrata HOM05D000006 ORTHO05D004030 6.4e-132 474.6 399 65.4
TAR381G0924 Trochodendron aralioides HOM05D000006 ORTHO05D004030 6.4e-132 474.6 405 65.2
BcaB08g37162 Brassica carinata HOM05D000006 ORTHO05D004030 8.4e-132 474.2 404 64.6
Cc04_g08910 Coffea canephora HOM05D000006 ORTHO05D004030 8.4e-132 474.2 343 73.5
THA.LOC104799527 Tarenaya hassleriana HOM05D000006 ORTHO05D004030 8.4e-132 474.2 414 64.0
Actinidia23042 Actinidia chinensis HOM05D000006 ORTHO05D004030 1.1e-131 473.8 406 64.3
PSO210G6583 Papaver somniferum HOM05D000006 ORTHO05D004030 1.1e-131 473.8 341 73.6
Potri.002G089500 Populus trichocarpa HOM05D000006 ORTHO05D004030 1.4e-131 473.4 341 73.0
Rhsim11G0065000 Rhododendron simsii HOM05D000006 ORTHO05D004030 1.4e-131 473.4 353 71.7
PGR142G3648 Punica granatum HOM05D000006 ORTHO05D004030 1.9e-131 473.0 341 73.0
Dinv26721 Davidia involucrata HOM05D000006 ORTHO05D004030 2.5e-131 472.6 341 73.6
Thecc.08G116400 Theobroma cacao HOM05D000006 ORTHO05D004030 2.5e-131 472.6 343 73.5
PSO447G0296 Papaver somniferum HOM05D000006 ORTHO05D004030 3.2e-131 472.2 341 73.3
QL05p058776 Quercus lobata HOM05D000006 ORTHO05D004030 3.2e-131 472.2 341 73.6
AL6G20140 Arabidopsis lyrata HOM05D000006 ORTHO05D004030 4.2e-131 471.9 400 64.5
Eucgr.F04379 Eucalyptus grandis HOM05D000006 ORTHO05D004030 4.2e-131 471.9 405 64.7
Potri.005G171700 Populus trichocarpa HOM05D000006 ORTHO05D004030 5.5e-131 471.5 341 72.7
Sabra02G0070500 Salix brachista HOM05D000006 ORTHO05D004030 5.5e-131 471.5 367 68.9
THA.LOC104819319 Tarenaya hassleriana HOM05D000006 ORTHO05D004030 5.5e-131 471.5 343 72.6
Actinidia03495 Actinidia chinensis HOM05D000006 ORTHO05D004030 7.1e-131 471.1 402 64.4
AL8G42020 Arabidopsis lyrata HOM05D000006 ORTHO05D004030 7.1e-131 471.1 411 63.7
Glyma.06G316400 Glycine max HOM05D000006 ORTHO05D004030 9.3e-131 470.7 344 73.3
CSS0012091 Camellia sinensis var. sinensis HOM05D000006 ORTHO05D004030 1.2e-130 470.3 343 72.9
HanXRQChr02g0044231 Helianthus annuus HOM05D000006 ORTHO05D004030 1.2e-130 470.3 341 72.4
COL.COLO4_21821 Corchorus olitorius HOM05D000006 ORTHO05D004030 1.6e-130 469.9 344 73.3
TAR625G0616 Trochodendron aralioides HOM05D000006 ORTHO05D004030 1.6e-130 469.9 399 65.4
AT5G64610 Arabidopsis thaliana HOM05D000006 ORTHO05D004030 2.1e-130 469.5 402 64.2
Lj4A550G32 Lonicera japonica HOM05D000006 ORTHO05D004030 2.1e-130 469.5 406 64.3
GSVIVG01008945001 Vitis vinifera HOM05D000006 ORTHO05D004030 2.1e-130 469.5 341 73.3
Glyma.04G130300 Glycine max HOM05D000006 ORTHO05D004030 2.7e-130 469.2 344 73.0
MD08G1173300 Malus domestica HOM05D000006 ORTHO05D004030 2.7e-130 469.2 341 73.0
MD15G1358600 Malus domestica HOM05D000006 ORTHO05D004030 2.7e-130 469.2 341 73.0
Sabra05G0129200 Salix brachista HOM05D000006 ORTHO05D004030 3.5e-130 468.8 341 72.1
Lj4A578G72 Lonicera japonica HOM05D000006 ORTHO05D004030 4.6e-130 468.4 341 72.7
Zm00001eb328000 Zea mays HOM05D000006 ORTHO05D004030 4.6e-130 468.4 342 73.1
arahy.Tifrunner.gnm1.ann1.6W1W5K Arachis hypogaea HOM05D000006 ORTHO05D004030 6.0e-130 468.0 344 73.0
arahy.Tifrunner.gnm1.ann1.B54JNT Arachis hypogaea HOM05D000006 ORTHO05D004030 6.0e-130 468.0 344 73.0
EL10Ac1g00041 Beta vulgaris HOM05D000006 ORTHO05D004030 6.0e-130 468.0 341 72.1
DCAR_014281 Daucus carota HOM05D000006 ORTHO05D004030 6.0e-130 468.0 341 73.0
Gohir.D06G041700 Gossypium hirsutum HOM05D000006 ORTHO05D004030 6.0e-130 468.0 344 73.3
Gorai.010G046900 Gossypium raimondii HOM05D000006 ORTHO05D004030 6.0e-130 468.0 344 73.3
Prupe.1G506200 Prunus persica HOM05D000006 ORTHO05D004030 6.0e-130 468.0 399 64.7
Lsat_1_v5_gn_1_12240 Lactuca sativa HOM05D000006 ORTHO05D004030 7.9e-130 467.6 341 72.4
HPP92_004738 Vanilla planifolia HOM05D000006 ORTHO05D004030 7.9e-130 467.6 343 72.6
ATR0564G159 Amborella trichopoda HOM05D000006 ORTHO05D004030 1.3e-129 466.8 343 72.6
Lalb_Chr18g0049021 Lupinus albus HOM05D000006 ORTHO05D004030 1.3e-129 466.8 420 62.6
Carub.0008s2540 Capsella rubella HOM05D000006 ORTHO05D004030 1.8e-129 466.5 343 71.7
Oeu039581.2 Olea europaea HOM05D000006 ORTHO05D004030 1.8e-129 466.5 430 61.4
Sc23g0000920 Simmondsia chinensis HOM05D000006 ORTHO05D004030 1.8e-129 466.5 341 72.4
VMungo1080G1349 Vigna mungo HOM05D000006 ORTHO05D004030 1.8e-129 466.5 344 72.4
CARHR278580 Cardamine hirsuta HOM05D000006 ORTHO05D004030 2.3e-129 466.1 343 71.7
MELO3C022788.2 Cucumis melo HOM05D000006 ORTHO05D004030 2.3e-129 466.1 341 72.7
CsaV3_5G023540 Cucumis sativus L. HOM05D000006 ORTHO05D004030 2.3e-129 466.1 341 72.7
Gohir.A05G231900 Gossypium hirsutum HOM05D000006 ORTHO05D004030 2.3e-129 466.1 344 73.0
Gohir.D05G234200 Gossypium hirsutum HOM05D000006 ORTHO05D004030 2.3e-129 466.1 344 73.0
Gorai.009G242400 Gossypium raimondii HOM05D000006 ORTHO05D004030 2.3e-129 466.1 344 73.0
Peaxi162Scf00360g00314 Petunia axillaris HOM05D000006 ORTHO05D004030 3.0e-129 465.7 367 69.2
CANSAT56G0745 Cannabis sativa HOM05D000006 ORTHO05D004030 3.9e-129 465.3 342 72.5
Ca_14036_v3 Cicer arietinum L. HOM05D000006 ORTHO05D004030 3.9e-129 465.3 344 72.4
Thhalv10004220m.g Eutrema salsugineum HOM05D000006 ORTHO05D004030 3.9e-129 465.3 400 63.8
Sed0027470 Sechium edule HOM05D000006 ORTHO05D004030 3.9e-129 465.3 341 72.4
Sc01g0001570 Simmondsia chinensis HOM05D000006 ORTHO05D004030 3.9e-129 465.3 341 72.1
FvH4_5g38850 Fragaria vesca HOM05D000006 ORTHO05D004030 5.1e-129 464.9 408 63.7
FAN08G2703 Fragaria x ananassa HOM05D000006 ORTHO05D004030 5.1e-129 464.9 408 63.7
FAN18G2681 Fragaria x ananassa HOM05D000006 ORTHO05D004030 5.1e-129 464.9 408 63.7
TWI79G1190 Tripterygium wilfordii HOM05D000006 ORTHO05D004030 5.1e-129 464.9 341 72.1
Gohir.A06G040700 Gossypium hirsutum HOM05D000006 ORTHO05D004030 6.7e-129 464.5 344 72.7
Aa31LG1G17340 Aethionema arabicum HOM05D000006 ORTHO05D004030 8.7e-129 464.2 343 70.8
BcaB08g37191 Brassica carinata HOM05D000006 ORTHO05D004030 8.7e-129 464.2 343 71.7
A10p27700 Brassica napus HOM05D000006 ORTHO05D004030 8.7e-129 464.2 343 71.7
BraA10t44822Z Brassica rapa HOM05D000006 ORTHO05D004030 8.7e-129 464.2 343 71.7
Thhalv10013550m.g Eutrema salsugineum HOM05D000006 ORTHO05D004030 8.7e-129 464.2 343 71.7
Os07g0626600 Oryza sativa ssp. japonica HOM05D000006 ORTHO05D004030 8.7e-129 464.2 342 72.8
Sp2g27670 Schrenkiella parvula HOM05D000006 ORTHO05D004030 8.7e-129 464.2 343 71.1
Aa31LG3G17360 Aethionema arabicum HOM05D000006 ORTHO05D004030 1.1e-128 463.8 343 71.4
FAN13G0359 Fragaria x ananassa HOM05D000006 ORTHO05D004030 1.1e-128 463.8 408 63.5
Lj3g0019564 Lotus japonicus HOM05D000006 ORTHO05D004030 1.1e-128 463.8 344 71.8
Phvul.005G010700 Phaseolus vulgaris HOM05D000006 ORTHO05D004030 1.5e-128 463.4 344 71.8
Phvul.005G011500 Phaseolus vulgaris HOM05D000006 ORTHO05D004030 1.5e-128 463.4 344 71.8
BcaB04g19978 Brassica carinata HOM05D000006 ORTHO05D004030 1.9e-128 463.0 407 62.4
Medtr3g007710 Medicago truncatula HOM05D000006 ORTHO05D004030 1.9e-128 463.0 409 63.1
TPR.G12257 Trifolium pratense HOM05D000006 ORTHO05D004030 2.5e-128 462.6 408 63.2
Aqoxy5G01525 Aquilegia oxysepala HOM05D000006 ORTHO05D004030 5.6e-128 461.5 341 71.8
BcaC04g23307 Brassica carinata HOM05D000006 ORTHO05D004030 5.6e-128 461.5 343 70.6
A09p08740 Brassica napus HOM05D000006 ORTHO05D004030 5.6e-128 461.5 343 70.6
C09p09880 Brassica napus HOM05D000006 ORTHO05D004030 5.6e-128 461.5 343 70.6
BolC9t53896H Brassica oleracea HOM05D000006 ORTHO05D004030 5.6e-128 461.5 343 70.6
BraA09t36523Z Brassica rapa HOM05D000006 ORTHO05D004030 5.6e-128 461.5 343 70.6
RcHm_v2.0_Chr7g0240841 Rosa chinensis HOM05D000006 ORTHO05D004030 5.6e-128 461.5 341 72.1
SGA_v2.0_scaffold25G11094 Striga asiatica HOM05D000006 ORTHO05D004030 5.6e-128 461.5 407 63.6
FAN04G0021 Fragaria x ananassa HOM05D000006 ORTHO05D004030 7.4e-128 461.1 341 72.1
ECA247G3040 Erigeron canadensis HOM05D000006 ORTHO05D000091 1.3e-127 460.3 341 71.3
Psat5g230080 Pisum sativum HOM05D000006 ORTHO05D004030 1.3e-127 460.3 410 62.4
Sp6g33660 Schrenkiella parvula HOM05D000006 ORTHO05D004030 1.6e-127 459.9 343 70.8
C09p67790 Brassica napus HOM05D000006 ORTHO05D004030 2.1e-127 459.5 344 71.5
BolC9t59541H Brassica oleracea HOM05D000006 ORTHO05D004030 2.1e-127 459.5 344 71.5
AT5G09740 Arabidopsis thaliana HOM05D000006 ORTHO05D004030 3.7e-127 458.8 343 70.3
Ah.05g172680 Amaranthus hybridus HOM05D000006 ORTHO05D004030 8.2e-127 457.6 415 61.7
vmacro12808 Vaccinium macrocarpon HOM05D000006 ORTHO05D004030 8.2e-127 457.6 470 56.8
SEGI_25942 Sequoiadendron giganteum HOM05D000006 ORTHO05D004030 3.1e-126 455.7 341 69.5
Mapoly0014s0119 Marchantia polymorpha HOM05D000006 ORTHO05D004030 6.9e-126 454.5 412 60.9
AUR62004690 Chenopodium quinoa HOM05D000006 ORTHO05D004030 9.0e-126 454.1 361 67.6
ClCG03G009080 Citrullus lanatus HOM05D000006 ORTHO05D004030 2.2e-124 449.5 374 66.3
CAN.G255.14 Capsicum annuum HOM05D000006 ORTHO05D004030 4.9e-124 448.4 343 70.8
Pp3c4_18030 Physcomitrium patens HOM05D000006 ORTHO05D004030 2.5e-123 446.0 342 68.4
AagrBONN_evm.TU.Sc2ySwM_344.1570 Anthoceros agrestis HOM05D000006 ORTHO05D004030 1.3e-121 440.3 342 67.8
Hund16820 Selenicereus undatus HOM05D000006 ORTHO05D004030 1.3e-119 433.7 404 61.1
SMO351G0268 Selaginella moellendorffii HOM05D000006 ORTHO05D004030 3.7e-119 432.2 344 67.2
Duzib093G0061 Durio zibethinus HOM05D000006 ORTHO05D004030 2.4e-118 429.5 350 67.7
CBR_g17677 Chara braunii HOM05D000006 ORTHO05D004030 1.7e-116 423.3 353 65.2
Nitab4.5_0000051g0130 Nicotiana tabacum HOM05D000006 ORTHO05D004030 7.2e-115 417.9 343 66.2
MBI04_g34117_MAGBIO Magnolia biondii HOM05D000006 ORTHO05D004030 1.0e-113 414.1 341 67.4
Lj7C307G3 Lonicera japonica HOM05D000006 ORTHO05D004030 2.0e-112 409.8 406 58.9
AUR62023606 Chenopodium quinoa HOM05D000006 ORTHO05D004030 4.3e-112 408.7 420 57.1
Duzib116G0798 Durio zibethinus HOM05D000006 ORTHO05D004030 4.8e-111 405.2 418 58.6
CARHR203660 Cardamine hirsuta HOM05D000006 ORTHO05D004030 1.3e-103 380.6 255 76.5
CAN.G222.83 Capsicum annuum HOM05D000006 ORTHO05D004030 1.7e-95 353.6 263 70.0
TAR628G0303 Trochodendron aralioides HOM05D000006 ORTHO05D004030 2.8e-95 352.8 273 68.1
Aqoxy6G00495 Aquilegia oxysepala HOM05D000006 ORTHO05D004030 6.8e-89 331.6 342 53.8
Nn5g28927 Nelumbo nucifera HOM05D000006 ORTHO05D004030 1.0e-84 317.8 404 50.7
Manes.18G072700 Manihot esculenta HOM05D000006 ORTHO05D004030 1.6e-82 310.5 409 49.4
PRCOL_00001934 Prasinoderma coloniale HOM05D000006 ORTHO05D004030 6.8e-81 305.1 344 50.9
Cre03.g143907 Chlamydomonas reinhardtii HOM05D000006 ORTHO05D004030 5.7e-80 302.0 341 50.7
MCO10G273 Micromonas commoda HOM05D000006 ORTHO05D004030 2.3e-76 290.0 346 49.1
Cpa.g.sc42.141 Carica papaya HOM05D000006 ORTHO05D004030 1.3e-71 274.2 235 65.1
Zm00001eb109790 Zea mays HOM05D000006 ORTHO05D004030 1.6e-69 267.3 165 82.4
Mapoly0014s0220 Marchantia polymorpha HOM05D000006 ORTHO05D004030 1.3e-60 237.7 288 47.9
Cre13.g587150 Chlamydomonas reinhardtii HOM05D000006 ORTHO05D004030 2.6e-56 223.4 323 42.7
MCO09G855 Micromonas commoda HOM05D000006 ORTHO05D004030 7.8e-53 211.8 286 46.2
Haze_27167 Corylus avellana HOM05D000006 ORTHO05D004030 1.0e-52 211.5 303 43.2
AagrBONN_evm.TU.Sc2ySwM_344.3271 Anthoceros agrestis HOM05D000006 ORTHO05D004030 1.7e-52 210.7 346 40.2
CDE02G1825 Ceratophyllum demersum HOM05D000006 ORTHO05D004030 1.7e-52 210.7 202 60.4
Haze_26687 Corylus avellana HOM05D000006 ORTHO05D004030 7.3e-51 205.3 226 49.6
MCO10G130 Micromonas commoda HOM05D000006 ORTHO05D004030 8.9e-49 198.4 265 43.0
Haze_26200 Corylus avellana HOM05D000006 ORTHO05D004030 4.4e-48 196.1 232 46.6
Pp3c2_37980 Physcomitrium patens HOM05D000006 ORTHO05D004030 6.4e-47 192.2 218 49.5
PRCOL_00006094 Prasinoderma coloniale HOM05D000006 ORTHO05D004030 2.1e-45 187.2 307 38.8
TAR376G0202 Trochodendron aralioides HOM05D000006 ORTHO05D004030 7.8e-45 185.3 108 79.6
Cfa027305 Carpinus fangiana HOM05D000006 ORTHO05D004030 8.1e-42 175.3 215 45.1
Cfa025466 Carpinus fangiana HOM05D000006 ORTHO05D004030 1.4e-41 174.5 288 35.8
PSO541G6025 Papaver somniferum HOM05D000006 ORTHO05D004030 5.2e-41 172.6 286 39.2
PSO675G4731 Papaver somniferum HOM05D000006 ORTHO05D004030 6.8e-41 172.2 286 39.2
arahy.Tifrunner.gnm1.ann1.10Y5RS Arachis hypogaea HOM05D000006 ORTHO05D004030 2.9e-39 166.8 165 57.0
CAN.G959.48 Capsicum annuum HOM05D000006 ORTHO05D004030 3.8e-39 166.4 105 78.1
FAN25G2177 Fragaria x ananassa HOM05D000006 ORTHO05D004030 1.9e-38 164.1 78 94.9
SEGI_04115 Sequoiadendron giganteum HOM05D000006 ORTHO05D004030 2.1e-37 160.6 187 47.1
SEGI_33287 Sequoiadendron giganteum HOM05D000006 ORTHO05D004030 4.6e-37 159.5 169 50.3
arahy.Tifrunner.gnm1.ann1.B34789 Arachis hypogaea HOM05D000006 ORTHO05D004030 6.2e-34 149.1 186 49.5
Haze_26386 Corylus avellana HOM05D000006 ORTHO05D004030 1.4e-33 147.9 251 36.7
CAN.G1733.7 Capsicum annuum HOM05D000006 ORTHO05D004030 3.1e-33 146.7 194 50.0
Gorai.011G166000 Gossypium raimondii HOM05D000006 ORTHO05D004030 6.9e-33 145.6 209 47.8
arahy.Tifrunner.gnm1.ann1.KN38JA Arachis hypogaea HOM05D000006 ORTHO05D004030 4.6e-29 132.9 127 58.3
BcaC01g02690 Brassica carinata HOM05D000006 ORTHO05D004030 4.6e-29 132.9 211 42.2
PSO210G6350 Papaver somniferum HOM05D000006 ORTHO05D004030 5.3e-25 119.4 151 41.7
Cpa.g.sc42.140 Carica papaya HOM05D000006 ORTHO05D004030 8.4e-23 112.1 124 57.3
CDE02G1028 Ceratophyllum demersum HOM05D000006 ORTHO05D004030 3.9e-20 103.2 54 96.3
SEGI_24978 Sequoiadendron giganteum HOM05D000006 ORTHO05D004030 2.4e-17 94.0 121 45.5
Gohir.D04G003466 Gossypium hirsutum HOM05D000006 ORTHO05D004030 9.0e-17 92.0 113 52.2
Gorai.012G004600 Gossypium raimondii HOM05D000006 ORTHO05D004030 4.5e-16 89.7 113 51.3
arahy.Tifrunner.gnm1.ann1.D5YD9F Arachis hypogaea HOM05D000006 ORTHO05D004030 1.0e-15 88.6 153 41.8
A06p31330 Brassica napus HOM05D000006 ORTHO05D004030 1.3e-15 88.2 129 45.7
SEGI_07614 Sequoiadendron giganteum HOM05D000006 ORTHO05D004030 1.4e-14 84.7 49 83.7
Glyma.06G315500 Glycine max HOM05D002539 ORTHO05D002876 7.1e-14 82.4 50 88.0
BraA06t26075Z Brassica rapa HOM05D000006 ORTHO05D004030 1.6e-13 81.3 49 73.5
CAN.G523.61 Capsicum annuum HOM05D001058 ORTHO05D000911 1.3e-12 78.2 41 85.4
Cfa026876 Carpinus fangiana HOM05D000006 ORTHO05D004030 3.7e-10 70.1 117 34.2


User provided reference genes

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