Gene: Solyc11g013520.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc11g013520.3
  • Transcript Identifier Solyc11g013520.3.1
  • Gene Type Coding gene
  • Location SL4.0ch11 : 6658670-6668468 : negative

Gene Family Information

  • ID HOM05D000006
  • #Genes/#Species 11474/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc11g013520.3.1
  • uniprot A0A3Q7JK20
  • gene_id Solyc11g013520

Descriptions

  • Description Histone acetyltransferase (AHRD V3.3 *** A0A2G3CMD1_CAPCH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010224
ISO
PLAZA Integrative Orthologyresponse to UV-B AT5G09740
GO:2000028
ISO
PLAZA Integrative Orthologyregulation of photoperiodism, flowering AT5G64610
GO:0006281
ISO
PLAZA Integrative OrthologyDNA repair AT5G09740
GO:0045892
IBA
GOA Databasenegative regulation of transcription, DNA-templated
GO:0045944
IBA
GOA Databasepositive regulation of transcription by RNA polymerase II
GO:0016573
IEA
GOA Databasehistone acetylation
GO:0016573
IEA
InterProhistone acetylation
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003712
IBA
GOA Databasetranscription coregulator activity
GO:0043995
ISO
PLAZA Integrative Orthologyhistone acetyltransferase activity (H4-K5 specific) AT5G64610
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G09740
GO:0004402
IBA
IEA
GOA Databasehistone acetyltransferase activity
GO:0004402
IEA
InterProhistone acetyltransferase activity
GO:0042393
IBA
GOA Databasehistone binding
GO:0016740
IEA
GOA Databasetransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G09740

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR025995 RNA binding activity-knot of a chromodomain
IPR002717 Histone acetyltransferase domain, MYST-type
IPR000953 Chromo/chromo shadow domain
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR040706 MYST, zinc finger domain
IPR016181 Acyl-CoA N-acyltransferase
IPR016197 Chromo-like domain superfamily
Mapman id Description
12.3.1.1.1.3 Chromatin organisation.post-translational histone modification.histone acetylation.NuA4 histone acetyltransferase complex.Piccolo module.acetyltransferase component HAM