Gene: Sopen11g008540

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g008540
  • Transcript Identifier Sopen11g008540.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 7815731-7826569 : negative

Gene Family Information

  • ID HOM05D000006
  • #Genes/#Species 11474/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g008540.1

Descriptions

  • Description Encodes an enzyme with histone acetyltransferase activity. HAM1 primarily acetylate histone H4, but also display some ability to acetylate H3. Prior acetylation of lysine 5 on histone H4 reduces radioactive acetylation by either HAM1. HAM1 acetylates histone H4 lysine 5. | histone acetyltransferase of the MYST family 1 (HAM1) | FUNCTIONS IN: histone acetyltransferase activity, zinc ion binding, nucleic acid binding | INVOLVED IN: chromatin assembly or disassembly, regulation of transcription | LOCATED IN: nucleus | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding , Acyl-CoA N-acyltransferase , Chromo domain , MOZ/SAS-like protein | BEST Arabidopsis thaliana protein match is: histone acetyltransferase of the MYST family 2
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0016573
IEA
InterProhistone acetylation
GO:0006281
ISO
PLAZA Integrative OrthologyDNA repair AT5G09740
GO:2000028
ISO
PLAZA Integrative Orthologyregulation of photoperiodism, flowering AT5G64610
GO:0010224
ISO
PLAZA Integrative Orthologyresponse to UV-B AT5G09740

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004402
IEA
InterProhistone acetyltransferase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G09740
GO:0043995
ISO
PLAZA Integrative Orthologyhistone acetyltransferase activity (H4-K5 specific) AT5G64610

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G09740

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR025995 RNA binding activity-knot of a chromodomain
IPR016197 Chromo-like domain superfamily
IPR040706 MYST, zinc finger domain
IPR002717 Histone acetyltransferase domain, MYST-type
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR016181 Acyl-CoA N-acyltransferase
IPR000953 Chromo/chromo shadow domain
Mapman id Description
12.3.1.1.1.3 Chromatin organisation.post-translational histone modification.histone acetylation.NuA4 histone acetyltransferase complex.Piccolo module.acetyltransferase component HAM