Gene: AT5G09740

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G09740
  • Transcript Identifier AT5G09740.1
  • Gene Type Coding gene
  • Location Chr5 : 3022141-3024711 : negative

Gene Family Information

  • ID HOM05D000006
  • #Genes/#Species 11474/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G09740.1
  • symbol HAM2
  • Alias HAC11,HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 11,HAG05,HAG5,HISTONE ACETYLTRANSFERASE OF THE GNAT/MYST SUPERFAMILY 5
  • uniprot Q9LXD7

Descriptions

  • Description histone acetyltransferase of the MYST family 2
  • Computational description histone acetyltransferase of the MYST family 2 (HAM2); FUNCTIONS IN: histone acetyltransferase activity, zinc ion binding, nucleic acid binding; INVOLVED IN: chromatin assembly or disassembly, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Acyl-CoA N-acyltransferase (InterPro:IPR016181), MOZ/SAS-like protein (InterPro:IPR002717), Chromo domain (InterPro:IPR000953); BEST Arabidopsis thaliana protein match is: histone acetyltransferase of the MYST family 1 (TAIR:AT5G64610.1); Has 1635 Blast hits to 1565 proteins in 235 species: Archae - 0; Bacteria - 4; Metazoa - 872; Fungi - 459; Plants - 89; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016573
IEA
Gene Ontologyhistone acetylation
GO:0016573
IEA
InterProhistone acetylation
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0006325
IEA
GOA Databasechromatin organization
GO:0045944
IBA
Gene Ontologypositive regulation of transcription by RNA polymerase II1
GO:0045892
IBA
Gene Ontologynegative regulation of transcription, DNA-templated1
GO:0010224
IEP
Gene Ontologyresponse to UV-B2
GO:0006281
IMP
Gene OntologyDNA repair2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003712
IBA
Gene Ontologytranscription coregulator activity1
GO:0004402
IEA
GOA Databasehistone acetyltransferase activity
GO:0004402
IDA
ISS, IBA
Gene Ontologyhistone acetyltransferase activity1 3 4
GO:0004402
IEA
InterProhistone acetyltransferase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0016746
IEA
GOA Databaseacyltransferase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0042393
IBA
Gene Ontologyhistone binding1
GO:0005515
IPI
Gene Ontologyprotein binding5

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM
Gene Ontologynucleus4

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR040706 MYST, zinc finger domain
IPR000953 Chromo/chromo shadow domain
IPR025995 RNA binding activity-knot of a chromodomain
IPR002717 Histone acetyltransferase domain, MYST-type
IPR016197 Chromo-like domain superfamily
IPR016181 Acyl-CoA N-acyltransferase
IPR036388 Winged helix-like DNA-binding domain superfamily
Mapman id Description
12.3.1.1.1.3 Chromatin organisation.post-translational histone modification.histone acetylation.NuA4 histone acetyltransferase complex.Piccolo module.acetyltransferase component HAM