Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold266G46140 Striga asiatica HOM05D004433 ORTHO05D005251 7.9e-94 347.1 170 100.0
Manes.16G073200 Manihot esculenta HOM05D004433 ORTHO05D005251 2.4e-21 106.3 137 49.6
PSO210G0672 Papaver somniferum HOM05D004433 ORTHO05D005251 2.4e-21 106.3 137 49.6
Ca_12764_v3 Cicer arietinum L. HOM05D004433 ORTHO05D005251 9.9e-20 100.9 78 71.8
MSTRG.25921 Avicennia marina HOM05D004433 ORTHO05D005251 2.9e-19 99.4 57 89.5
Ciclev10007803m.g Citrus clementina HOM05D004433 ORTHO05D005251 2.9e-19 99.4 57 93.0
PGR031G3150 Punica granatum HOM05D004433 ORTHO05D005251 2.9e-19 99.4 57 91.2
SGA_v2.0_scaffold103G30047 Striga asiatica HOM05D004433 ORTHO05D005251 2.9e-19 99.4 57 91.2
TAR639G0002 Trochodendron aralioides HOM05D004433 ORTHO05D005251 2.9e-19 99.4 57 91.2
Migut.A00179 Erythranthe guttata HOM05D004433 ORTHO05D005251 3.8e-19 99.0 57 91.2
Lj7C697T10 Lonicera japonica HOM05D004433 ORTHO05D005251 3.8e-19 99.0 61 85.2
Eucgr.C00613 Eucalyptus grandis HOM05D004433 ORTHO05D005251 4.9e-19 98.6 57 87.7
Oeu019243.1 Olea europaea HOM05D004433 ORTHO05D005251 6.4e-19 98.2 57 87.7
Rhsim11G0049500 Rhododendron simsii HOM05D004433 ORTHO05D005251 6.4e-19 98.2 56 92.9
Cfa013388 Carpinus fangiana HOM05D004433 ORTHO05D005251 8.4e-19 97.8 57 91.2
Aa31LG5G9810 Aethionema arabicum HOM05D004433 ORTHO05D005251 1.1e-18 97.4 57 86.0
Dinv27935 Davidia involucrata HOM05D004433 ORTHO05D005251 1.1e-18 97.4 57 91.2
Lalb_Chr22g0360911 Lupinus albus HOM05D004433 ORTHO05D005251 1.1e-18 97.4 57 91.2
Medtr1g007320 Medicago truncatula HOM05D004433 ORTHO05D005251 1.1e-18 97.4 57 89.5
Psat6g036080 Pisum sativum HOM05D004433 ORTHO05D005251 1.1e-18 97.4 61 85.2
vmacro00182 Vaccinium macrocarpon HOM05D004433 ORTHO05D005251 1.1e-18 97.4 57 89.5
HanXRQChr02g0047921 Helianthus annuus HOM05D004433 ORTHO05D005251 1.9e-18 96.7 57 84.2
PSO210G3373 Papaver somniferum HOM05D004433 ORTHO05D005251 1.9e-18 96.7 57 84.2
Phvul.001G078300 Phaseolus vulgaris HOM05D004433 ORTHO05D005251 1.9e-18 96.7 57 87.7
SalBow4G2164 Salvia bowleyana HOM05D004433 ORTHO05D005251 1.9e-18 96.7 57 86.0
VMungo1383G1648 Vigna mungo HOM05D004433 ORTHO05D005251 1.9e-18 96.7 57 87.7
COL.COLO4_21003 Corchorus olitorius HOM05D004433 ORTHO05D005251 2.4e-18 96.3 57 87.7
Glyma.14G144100 Glycine max HOM05D004433 ORTHO05D005251 2.4e-18 96.3 57 87.7
Lj8A567T30 Lonicera japonica HOM05D004433 ORTHO05D005251 2.4e-18 96.3 60 85.0
GSVIVG01035316001 Vitis vinifera HOM05D004433 ORTHO05D005251 2.4e-18 96.3 57 87.7
Cc08_g09960 Coffea canephora HOM05D004433 ORTHO05D005251 3.2e-18 95.9 57 84.2
TWI34G1917 Tripterygium wilfordii HOM05D004433 ORTHO05D005251 3.2e-18 95.9 57 87.7
Duzib168G1809 Durio zibethinus HOM05D004433 ORTHO05D005251 4.2e-18 95.5 57 87.7
Lj1g0025930 Lotus japonicus HOM05D004433 ORTHO05D005251 4.2e-18 95.5 57 86.0
MD08G1110200 Malus domestica HOM05D004433 ORTHO05D005251 4.2e-18 95.5 57 87.7
Atru.chr7.2050 Acer truncatum HOM05D004433 ORTHO05D005251 5.4e-18 95.1 57 86.0
arahy.Tifrunner.gnm1.ann1.AK26AV Arachis hypogaea HOM05D004433 ORTHO05D005251 5.4e-18 95.1 57 86.0
arahy.Tifrunner.gnm1.ann1.YGB7WG Arachis hypogaea HOM05D004433 ORTHO05D005251 5.4e-18 95.1 57 86.0
DCAR_003083 Daucus carota HOM05D004433 ORTHO05D005251 5.4e-18 95.1 57 84.2
Nn8g39044 Nelumbo nucifera HOM05D004433 ORTHO05D005251 5.4e-18 95.1 57 89.5
QL12p040912 Quercus lobata HOM05D004433 ORTHO05D005251 5.4e-18 95.1 60 81.7
FvH4_2g35220 Fragaria vesca HOM05D004433 ORTHO05D005251 7.1e-18 94.7 57 86.0
FAN20G2992 Fragaria x ananassa HOM05D004433 ORTHO05D005251 7.1e-18 94.7 57 86.0
Gohir.A06G091200 Gossypium hirsutum HOM05D004433 ORTHO05D005251 7.1e-18 94.7 57 84.2
Gohir.D06G090400 Gossypium hirsutum HOM05D004433 ORTHO05D005251 7.1e-18 94.7 57 84.2
Gorai.010G104100 Gossypium raimondii HOM05D004433 ORTHO05D005251 7.1e-18 94.7 57 84.2
Prupe.1G444400 Prunus persica HOM05D004433 ORTHO05D005251 7.1e-18 94.7 57 86.0
Prupe.1G444500 Prunus persica HOM05D004433 ORTHO05D005251 7.1e-18 94.7 57 84.2
Sp4g05710 Schrenkiella parvula HOM05D004433 ORTHO05D005251 7.1e-18 94.7 57 82.5
TPR.G24519 Trifolium pratense HOM05D004433 ORTHO05D005251 7.1e-18 94.7 57 86.0
CAN.G1444.6 Capsicum annuum HOM05D004433 ORTHO05D005251 9.3e-18 94.4 57 86.0
ECA233G5497 Erigeron canadensis HOM05D004433 ORTHO05D005251 9.3e-18 94.4 57 84.2
FAN15G1676 Fragaria x ananassa HOM05D004433 ORTHO05D005251 9.3e-18 94.4 57 84.2
RcHm_v2.0_Chr6g0306711 Rosa chinensis HOM05D004433 ORTHO05D005251 9.3e-18 94.4 57 84.2
THA.LOC104818595 Tarenaya hassleriana HOM05D004433 ORTHO05D005251 9.3e-18 94.4 57 82.5
Actinidia14688 Actinidia chinensis HOM05D004433 ORTHO05D005251 1.2e-17 94.0 57 86.0
Aqoxy5G01364 Aquilegia oxysepala HOM05D004433 ORTHO05D005251 1.2e-17 94.0 57 82.5
CANSAT21G1878 Cannabis sativa HOM05D004433 ORTHO05D005251 1.2e-17 94.0 57 86.0
CANSAT21G2561 Cannabis sativa HOM05D004433 ORTHO05D005251 1.2e-17 94.0 57 86.0
FAN27G1484 Fragaria x ananassa HOM05D004433 ORTHO05D005251 1.2e-17 94.0 56 87.5
unitig_32.g11476 Utricularia gibba HOM05D004433 ORTHO05D005251 1.2e-17 94.0 57 84.2
AT2G25870 Arabidopsis thaliana HOM05D004433 ORTHO05D005251 2.1e-17 93.2 57 80.7
Duzib150G0295 Durio zibethinus HOM05D004433 ORTHO05D005251 2.1e-17 93.2 57 86.0
Thhalv10001936m.g Eutrema salsugineum HOM05D004433 ORTHO05D005251 2.1e-17 93.2 57 80.7
Potri.018G057500 Populus trichocarpa HOM05D004433 ORTHO05D005251 2.1e-17 93.2 57 86.0
Sabra18G0052000 Salix brachista HOM05D004433 ORTHO05D005251 2.1e-17 93.2 61 80.3
Actinidia18212 Actinidia chinensis HOM05D004433 ORTHO05D005251 2.7e-17 92.8 57 84.2
AL4G17700 Arabidopsis lyrata HOM05D004433 ORTHO05D005251 2.7e-17 92.8 57 80.7
Oeu008300.1 Olea europaea HOM05D004433 ORTHO05D005251 2.7e-17 92.8 57 84.2
Sed0005675 Sechium edule HOM05D004433 ORTHO05D005251 2.7e-17 92.8 57 82.5
Carub.0004s0569 Capsella rubella HOM05D004433 ORTHO05D005251 3.5e-17 92.4 57 80.7
CARHR115360 Cardamine hirsuta HOM05D004433 ORTHO05D005251 3.5e-17 92.4 57 80.7
Ca_03360_v3 Cicer arietinum L. HOM05D004433 ORTHO05D005251 4.6e-17 92.0 54 87.0
MELO3C003474.2 Cucumis melo HOM05D004433 ORTHO05D005251 4.6e-17 92.0 57 82.5
CsaV3_3G048450 Cucumis sativus L. HOM05D004433 ORTHO05D005251 4.6e-17 92.0 57 82.5
MBI04_g07004_MAGBIO Magnolia biondii HOM05D004433 ORTHO05D005251 4.6e-17 92.0 57 82.5
RcHm_v2.0_Chr6g0306701 Rosa chinensis HOM05D004433 ORTHO05D005251 4.6e-17 92.0 57 84.2
Hund03376 Selenicereus undatus HOM05D004433 ORTHO05D005251 4.6e-17 92.0 57 77.2
Solyc08g066180.3 Solanum lycopersicum HOM05D004433 ORTHO05D005251 4.6e-17 92.0 57 84.2
Sopen08g019860 Solanum pennellii HOM05D004433 ORTHO05D005251 4.6e-17 92.0 57 84.2
Ah.10g034740 Amaranthus hybridus HOM05D004433 ORTHO05D005251 6.0e-17 91.7 57 77.2
ATR0705G146 Amborella trichopoda HOM05D004433 ORTHO05D005251 6.0e-17 91.7 57 82.5
EL10Ac2g03971 Beta vulgaris HOM05D004433 ORTHO05D005251 6.0e-17 91.7 57 82.5
BcaB06g29637 Brassica carinata HOM05D004433 ORTHO05D005251 6.0e-17 91.7 57 80.7
BcaB06g29638 Brassica carinata HOM05D004433 ORTHO05D005251 6.0e-17 91.7 57 80.7
A04p20080 Brassica napus HOM05D004433 ORTHO05D005251 6.0e-17 91.7 57 80.7
BolC4t27102H Brassica oleracea HOM05D004433 ORTHO05D005251 6.0e-17 91.7 57 80.7
BraA04t17590Z Brassica rapa HOM05D004433 ORTHO05D005251 6.0e-17 91.7 57 80.7
FvH4_2g35230 Fragaria vesca HOM05D004433 ORTHO05D005251 6.0e-17 91.7 57 82.5
CSS0005257 Camellia sinensis var. sinensis HOM05D004433 ORTHO05D005251 1.0e-16 90.9 57 82.5
CSS0005508 Camellia sinensis var. sinensis HOM05D004433 ORTHO05D005251 1.0e-16 90.9 57 82.5
Sc23g0005440 Simmondsia chinensis HOM05D004433 ORTHO05D005251 1.0e-16 90.9 57 78.9
Thecc.09G048300 Theobroma cacao HOM05D004433 ORTHO05D005251 1.0e-16 90.9 57 84.2
ClCG11G015050 Citrullus lanatus HOM05D004433 ORTHO05D005251 1.3e-16 90.5 57 78.9
FAN27G0398 Fragaria x ananassa HOM05D004433 ORTHO05D005251 1.7e-16 90.1 57 80.7
C04p55760 Brassica napus HOM05D004433 ORTHO05D005251 2.3e-16 89.7 57 78.9
AUR62009222 Chenopodium quinoa HOM05D004433 ORTHO05D005251 2.3e-16 89.7 57 80.7
AUR62040221 Chenopodium quinoa HOM05D004433 ORTHO05D005251 2.3e-16 89.7 57 80.7
FAN15G3540 Fragaria x ananassa HOM05D004433 ORTHO05D005251 2.3e-16 89.7 57 80.7
CiPaw.08G027400 Carya illinoinensis HOM05D004433 ORTHO05D005251 3.0e-16 89.4 57 82.5
Peaxi162Scf00699g00520 Petunia axillaris HOM05D004433 ORTHO05D005251 3.0e-16 89.4 57 80.7
Cpa.g.sc7.220 Carica papaya HOM05D004433 ORTHO05D005251 3.9e-16 89.0 57 80.7
CDE09G0966 Ceratophyllum demersum HOM05D004433 ORTHO05D005251 8.7e-16 87.8 57 80.7
Lsat_1_v5_gn_6_7781 Lactuca sativa HOM05D004433 ORTHO05D005251 8.7e-16 87.8 54 79.6
MD08G1110300 Malus domestica HOM05D004433 ORTHO05D005251 1.5e-15 87.0 57 78.9
Hund19490 Selenicereus undatus HOM05D004433 ORTHO05D005251 5.6e-15 85.1 52 82.7
SEGI_35823 Sequoiadendron giganteum HOM05D004433 ORTHO05D005251 5.6e-15 85.1 57 73.7
Zm00001eb153790 Zea mays HOM05D004433 ORTHO05D005251 7.3e-15 84.7 57 71.9
ATR1159G027 Amborella trichopoda HOM05D004433 ORTHO05D005251 9.6e-15 84.3 56 73.2
Nitab4.5_0000318g0140 Nicotiana tabacum HOM05D004433 ORTHO05D005251 1.3e-14 84.0 53 81.1
Nitab4.5_0008242g0010 Nicotiana tabacum HOM05D004433 ORTHO05D005251 6.2e-14 81.6 52 80.8
HPP92_005558 Vanilla planifolia HOM05D004433 ORTHO05D005251 1.1e-13 80.9 57 71.9
Os09g0388400 Oryza sativa ssp. japonica HOM05D004433 ORTHO05D005251 2.4e-10 69.7 54 63.0
Mapoly0124s0034 Marchantia polymorpha HOM05D004433 ORTHO05D005251 3.2e-10 69.3 54 61.1
Pp3c15_25010 Physcomitrium patens HOM05D004433 ORTHO05D005251 1.6e-09 67.0 56 57.1
Cre06.g252150 Chlamydomonas reinhardtii HOM05D004433 ORTHO05D005251 2.1e-09 66.6 55 58.2
CBR_g31496 Chara braunii HOM05D004433 ORTHO05D005251 6.0e-09 65.1 54 57.4
SMO352G0038 Selaginella moellendorffii HOM05D004433 ORTHO05D005251 8.7e-08 61.2 54 51.9
MCO02G391 Micromonas commoda HOM05D004433 ORTHO05D005251 2.8e-06 56.2 60 48.3
PRCOL_00001006 Prasinoderma coloniale HOM05D004433 ORTHO05D005251 2.8e-06 56.2 54 50.0


User provided reference genes

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