Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold230G43391 Striga asiatica HOM05D005980 ORTHO05D007618 3.5e-76 288.1 136 100.0
SGA_v2.0_scaffold6G03478 Striga asiatica HOM05D005980 ORTHO05D007618 6.0e-68 260.8 136 91.9
SGA_v2.0_scaffold51G18642 Striga asiatica HOM05D005980 ORTHO05D007618 4.4e-63 244.6 125 90.4
Nitab4.5_0000869g0050 Nicotiana tabacum HOM05D005980 ORTHO05D007618 2.3e-59 232.3 125 84.8
GSVIVG01021555001 Vitis vinifera HOM05D005980 ORTHO05D007618 3.9e-59 231.5 125 82.4
PGSC0003DMG402021097 Solanum tuberosum HOM05D005980 ORTHO05D007618 5.1e-59 231.1 125 84.0
CSS0019737 Camellia sinensis var. sinensis HOM05D005980 ORTHO05D007618 6.6e-59 230.7 125 81.6
Peaxi162Scf00670g00346 Petunia axillaris HOM05D005980 ORTHO05D007618 6.6e-59 230.7 125 84.8
CSS0007144 Camellia sinensis var. sinensis HOM05D005980 ORTHO05D007618 8.7e-59 230.3 125 81.6
Solyc02g070390.3 Solanum lycopersicum HOM05D005980 ORTHO05D007618 8.7e-59 230.3 125 84.0
Sopen02g019470 Solanum pennellii HOM05D005980 ORTHO05D007618 8.7e-59 230.3 125 84.0
Thecc.06G143900 Theobroma cacao HOM05D005980 ORTHO05D007618 1.1e-58 229.9 125 82.4
Ciclev10014878m.g Citrus clementina HOM05D005980 ORTHO05D007618 1.5e-58 229.6 125 80.8
Ca_00513_v3 Cicer arietinum L. HOM05D005980 ORTHO05D007618 1.9e-58 229.2 125 83.2
DCAR_003883 Daucus carota HOM05D005980 ORTHO05D007618 1.9e-58 229.2 125 83.2
Eucgr.D00262 Eucalyptus grandis HOM05D005980 ORTHO05D007618 2.5e-58 228.8 125 80.8
Sabra16G0236200 Salix brachista HOM05D005980 ORTHO05D007618 2.5e-58 228.8 125 82.4
Cc09_g08730 Coffea canephora HOM05D005980 ORTHO05D007618 3.3e-58 228.4 125 82.4
COL.COLO4_31005 Corchorus olitorius HOM05D005980 ORTHO05D007618 3.3e-58 228.4 125 81.6
Oeu032723.1 Olea europaea HOM05D005980 ORTHO05D007618 3.3e-58 228.4 125 81.6
Glyma.13G221300 Glycine max HOM05D005980 ORTHO05D007618 4.3e-58 228.0 125 81.6
Hma1.2p1_0586F.1_g183830 Hydrangea macrophylla HOM05D005980 ORTHO05D007618 5.6e-58 227.6 125 80.0
QL05p054997 Quercus lobata HOM05D005980 ORTHO05D007618 5.6e-58 227.6 125 80.0
MSTRG.16268 Avicennia marina HOM05D005980 ORTHO05D007618 7.3e-58 227.3 125 79.2
Lj1A1168T68 Lonicera japonica HOM05D005980 ORTHO05D007618 7.3e-58 227.3 125 80.8
Psat1g191560 Pisum sativum HOM05D005980 ORTHO05D007618 9.6e-58 226.9 125 82.4
Actinidia13438 Actinidia chinensis HOM05D005980 ORTHO05D007618 1.6e-57 226.1 125 80.0
Gorai.009G152600 Gossypium raimondii HOM05D005980 ORTHO05D007618 1.6e-57 226.1 125 81.6
Sc05g0005970 Simmondsia chinensis HOM05D005980 ORTHO05D007618 1.6e-57 226.1 125 82.4
Migut.M01863 Erythranthe guttata HOM05D005980 ORTHO05D007618 2.1e-57 225.7 126 81.7
PGR102G3344 Punica granatum HOM05D005980 ORTHO05D007618 2.8e-57 225.3 125 78.4
VMungo0540G0170 Vigna mungo HOM05D005980 ORTHO05D007618 2.8e-57 225.3 125 80.8
Aqoxy4G00005 Aquilegia oxysepala HOM05D005980 ORTHO05D007618 3.6e-57 224.9 125 80.0
Gohir.D05G148400 Gossypium hirsutum HOM05D005980 ORTHO05D007618 3.6e-57 224.9 125 80.8
Potri.001G358400 Populus trichocarpa HOM05D005980 ORTHO05D007618 4.7e-57 224.6 125 79.2
RcHm_v2.0_Chr5g0014971 Rosa chinensis HOM05D005980 ORTHO05D007618 6.2e-57 224.2 125 80.0
CiPaw.09G119300 Carya illinoinensis HOM05D005980 ORTHO05D007618 8.1e-57 223.8 125 80.0
AUR62025366 Chenopodium quinoa HOM05D005980 ORTHO05D007618 8.1e-57 223.8 125 80.8
AUR62028384 Chenopodium quinoa HOM05D005980 ORTHO05D007618 8.1e-57 223.8 125 80.8
Manes.15G125300 Manihot esculenta HOM05D005980 ORTHO05D007618 8.1e-57 223.8 125 79.2
Ah.12g059810 Amaranthus hybridus HOM05D005980 ORTHO05D007618 1.1e-56 223.4 125 81.6
FAN16G3332 Fragaria x ananassa HOM05D005980 ORTHO05D007618 1.1e-56 223.4 125 80.8
EL10Ac1g01827 Beta vulgaris HOM05D005980 ORTHO05D007618 1.8e-56 222.6 125 80.0
Dinv32210 Davidia involucrata HOM05D005980 ORTHO05D007618 1.8e-56 222.6 125 78.4
Gohir.A05G146100 Gossypium hirsutum HOM05D005980 ORTHO05D007618 1.8e-56 222.6 121 81.8
TAR626G0855 Trochodendron aralioides HOM05D005980 ORTHO05D007618 1.8e-56 222.6 125 78.4
Aa31LG10G6710 Aethionema arabicum HOM05D005980 ORTHO05D007618 2.4e-56 222.2 125 78.4
Phvul.006G168100 Phaseolus vulgaris HOM05D005980 ORTHO05D007618 2.4e-56 222.2 124 79.8
TPR.G26225 Trifolium pratense HOM05D005980 ORTHO05D007618 2.4e-56 222.2 125 80.0
Cpa.g.sc17.56 Carica papaya HOM05D005980 ORTHO05D007618 3.1e-56 221.9 120 81.7
SalBow8G1809 Salvia bowleyana HOM05D005980 ORTHO05D007618 3.1e-56 221.9 125 78.4
Haze_05690 Corylus avellana HOM05D005980 ORTHO05D007618 4.0e-56 221.5 120 80.0
FAN21G1725 Fragaria x ananassa HOM05D005980 ORTHO05D007618 5.2e-56 221.1 125 80.0
PSO675G5271 Papaver somniferum HOM05D005980 ORTHO05D007618 5.2e-56 221.1 125 78.4
FvH4_3g05000 Fragaria vesca HOM05D005980 ORTHO05D007618 6.9e-56 220.7 125 79.2
FAN11G3650 Fragaria x ananassa HOM05D005980 ORTHO05D007618 6.9e-56 220.7 125 79.2
Medtr2g018740 Medicago truncatula HOM05D005980 ORTHO05D007618 6.9e-56 220.7 125 78.4
AT2G34640 Arabidopsis thaliana HOM05D005980 ORTHO05D007618 9.0e-56 220.3 121 81.0
Nn3g20318 Nelumbo nucifera HOM05D005980 ORTHO05D007618 9.0e-56 220.3 124 79.8
TWI73G1267 Tripterygium wilfordii HOM05D005980 ORTHO05D007618 9.0e-56 220.3 124 78.2
Prupe.4G086000 Prunus persica HOM05D005980 ORTHO05D007618 1.2e-55 219.9 125 78.4
CANSAT35G0447 Cannabis sativa HOM05D005980 ORTHO05D007618 1.5e-55 219.5 121 82.6
CARHR128740 Cardamine hirsuta HOM05D005980 ORTHO05D007618 1.5e-55 219.5 121 80.2
FAN25G0178 Fragaria x ananassa HOM05D005980 ORTHO05D007618 1.5e-55 219.5 120 81.7
arahy.Tifrunner.gnm1.ann1.PI6078 Arachis hypogaea HOM05D005980 ORTHO05D007618 2.0e-55 219.2 120 80.0
ClCG01G024920 Citrullus lanatus HOM05D005980 ORTHO05D007618 2.0e-55 219.2 125 76.8
Carub.0004s1633 Capsella rubella HOM05D005980 ORTHO05D007618 2.6e-55 218.8 121 80.2
Dinv21517 Davidia involucrata HOM05D005980 ORTHO05D007618 2.6e-55 218.8 125 76.0
arahy.Tifrunner.gnm1.ann1.G1ZF0U Arachis hypogaea HOM05D005980 ORTHO05D007618 3.4e-55 218.4 120 80.0
Thhalv10016502m.g Eutrema salsugineum HOM05D005980 ORTHO05D007618 3.4e-55 218.4 121 79.3
PSO541G1780 Papaver somniferum HOM05D005980 ORTHO05D007618 3.4e-55 218.4 125 77.6
AL4G30630 Arabidopsis lyrata HOM05D005980 ORTHO05D007618 4.4e-55 218.0 121 80.2
Sed0012577 Sechium edule HOM05D005980 ORTHO05D007618 4.4e-55 218.0 125 76.8
vmacro03427 Vaccinium macrocarpon HOM05D005980 ORTHO05D007618 4.4e-55 218.0 125 76.0
MELO3C007103.2 Cucumis melo HOM05D005980 ORTHO05D007618 5.8e-55 217.6 125 76.0
Lalb_Chr18g0055171 Lupinus albus HOM05D005980 ORTHO05D007618 5.8e-55 217.6 124 78.2
MD10G1257800 Malus domestica HOM05D005980 ORTHO05D007618 7.6e-55 217.2 125 77.6
Sp4g16910 Schrenkiella parvula HOM05D005980 ORTHO05D007618 1.3e-54 216.5 121 79.3
THA.LOC104820671 Tarenaya hassleriana HOM05D005980 ORTHO05D007618 1.3e-54 216.5 121 80.2
BcaNung07262 Brassica carinata HOM05D005980 ORTHO05D007618 1.7e-54 216.1 121 79.3
A05p11020 Brassica napus HOM05D005980 ORTHO05D007618 1.7e-54 216.1 121 79.3
BraA05t20047Z Brassica rapa HOM05D005980 ORTHO05D007618 1.7e-54 216.1 121 79.3
CsaV3_6G052070 Cucumis sativus L. HOM05D005980 ORTHO05D007618 1.7e-54 216.1 125 75.2
Lj2C323G3 Lonicera japonica HOM05D005980 ORTHO05D007618 1.7e-54 216.1 125 75.2
Lj6g0019056 Lotus japonicus HOM05D005980 ORTHO05D007618 2.2e-54 215.7 125 77.6
Sed0023515 Sechium edule HOM05D005980 ORTHO05D007618 3.8e-54 214.9 125 76.0
BcaC02g11540 Brassica carinata HOM05D005980 ORTHO05D007618 6.4e-54 214.2 121 79.3
C04p14140 Brassica napus HOM05D005980 ORTHO05D007618 6.4e-54 214.2 121 79.3
BolC4t23002H Brassica oleracea HOM05D005980 ORTHO05D007618 6.4e-54 214.2 121 79.3
Zm00001eb152010 Zea mays HOM05D005980 ORTHO05D007618 2.4e-53 212.2 121 80.2
HanXRQChr10g0301191 Helianthus annuus HOM05D005980 ORTHO05D007618 9.3e-53 210.3 120 77.5
Rhsim13G0118300 Rhododendron simsii HOM05D005980 ORTHO05D007618 9.3e-53 210.3 122 77.0
ATR1098G083 Amborella trichopoda HOM05D005980 ORTHO05D007618 1.2e-52 209.9 125 73.6
Lsat_1_v5_gn_9_33800 Lactuca sativa HOM05D005980 ORTHO05D007618 2.1e-52 209.1 120 78.3
Os01g0769900 Oryza sativa ssp. japonica HOM05D005980 ORTHO05D007618 1.7e-51 206.1 121 76.9
ECA247G3302 Erigeron canadensis HOM05D005980 ORTHO05D007618 3.0e-51 205.3 120 75.8
Nitab4.5_0005963g0020 Nicotiana tabacum HOM05D005980 ORTHO05D007618 8.4e-46 187.2 98 86.7
arahy.Tifrunner.gnm1.ann1.D5DAI6 Arachis hypogaea HOM05D005980 ORTHO05D007618 3.9e-43 178.3 164 54.3
Mapoly0061s0053 Marchantia polymorpha HOM05D005980 ORTHO05D007618 4.3e-42 174.9 124 58.1
AagrBONN_evm.TU.Sc2ySwM_228.94 Anthoceros agrestis HOM05D005980 ORTHO05D007618 1.2e-39 166.8 123 56.9
unitig_578.g16128 Utricularia gibba HOM05D005980 ORTHO05D007618 5.1e-35 151.4 82 81.7
Pp3c10_12300 Physcomitrium patens HOM05D005980 ORTHO05D007618 1.3e-33 146.7 119 55.5
Pp3c3_26950 Physcomitrium patens HOM05D005980 ORTHO05D007618 4.0e-32 141.7 119 52.1
MD05G1278800 Malus domestica HOM05D005980 ORTHO05D007618 2.0e-31 139.4 77 80.5
HPP92_001893 Vanilla planifolia HOM05D005980 ORTHO05D007618 9.0e-24 114.0 62 80.6
HPP92_001892 Vanilla planifolia HOM05D005980 ORTHO05D007618 4.6e-20 101.7 56 78.6
CBR_g48045 Chara braunii HOM05D005980 ORTHO05D007618 1.0e-19 100.5 124 37.9
Hma1.2p1_0581F.1_g182930 Hydrangea macrophylla HOM05D005980 ORTHO05D007618 6.9e-16 87.8 46 78.3
Lsat_1_v5_gn_7_71901 Lactuca sativa HOM05D002457 ORTHO05D005750 4.2e-13 78.6 55 61.8
arahy.Tifrunner.gnm1.ann1.MPA65D Arachis hypogaea HOM05D005980 ORTHO05D007618 2.8e-09 65.9 33 81.8
Lsat_1_v5_gn_1_94021 Lactuca sativa HOM05D005980 ORTHO05D007618 2.0e-07 59.7 35 80.0


User provided reference genes

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