Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold20G09129 Striga asiatica HOM05D005263 ORTHO05D006891 8.7e-111 403.7 208 100.0
SGA_v2.0_scaffold122G33171 Striga asiatica HOM05D005263 ORTHO05D006891 4.1e-76 288.5 200 78.0
Oeu048684.2 Olea europaea HOM05D005263 ORTHO05D006891 1.2e-59 233.8 191 67.5
Dinv33264 Davidia involucrata HOM05D005263 ORTHO05D006891 4.3e-57 225.3 167 69.5
MSTRG.3034 Avicennia marina HOM05D005263 ORTHO05D006891 5.6e-57 224.9 190 66.3
Duzib147G0290 Durio zibethinus HOM05D005263 ORTHO05D006891 3.6e-56 222.2 174 67.8
Migut.F00003 Erythranthe guttata HOM05D005263 ORTHO05D006891 3.6e-56 222.2 173 69.4
THA.LOC104821142 Tarenaya hassleriana HOM05D005263 ORTHO05D006891 4.7e-56 221.9 167 70.1
PSO478G0722 Papaver somniferum HOM05D005263 ORTHO05D006891 6.1e-56 221.5 187 65.8
Nitab4.5_0002901g0080 Nicotiana tabacum HOM05D005263 ORTHO05D006891 8.0e-56 221.1 179 67.0
Solyc02g094590.3 Solanum lycopersicum HOM05D005263 ORTHO05D006891 8.0e-56 221.1 176 68.2
Sopen02g039240 Solanum pennellii HOM05D005263 ORTHO05D006891 8.0e-56 221.1 176 68.2
PSO017G0637 Papaver somniferum HOM05D005263 ORTHO05D006891 1.0e-55 220.7 181 67.4
Thecc.04G050600 Theobroma cacao HOM05D005263 ORTHO05D006891 1.4e-55 220.3 174 67.8
Gohir.A09G000300 Gossypium hirsutum HOM05D005263 ORTHO05D006891 3.1e-55 219.2 168 69.0
COL.COLO4_13398 Corchorus olitorius HOM05D005263 ORTHO05D006891 4.0e-55 218.8 190 61.6
Peaxi162Scf00420g00940 Petunia axillaris HOM05D005263 ORTHO05D006891 5.2e-55 218.4 172 68.6
Nn4g22084 Nelumbo nucifera HOM05D005263 ORTHO05D006891 6.8e-55 218.0 167 68.3
Psat3g091960 Pisum sativum HOM05D005263 ORTHO05D006891 8.9e-55 217.6 167 69.5
TAR622G0136 Trochodendron aralioides HOM05D005263 ORTHO05D006891 8.9e-55 217.6 167 68.9
Cpa.g.sc70.43 Carica papaya HOM05D005263 ORTHO05D006891 1.2e-54 217.2 171 67.8
Ca_08228_v3 Cicer arietinum L. HOM05D005263 ORTHO05D006891 1.2e-54 217.2 167 68.9
Gorai.006G000100 Gossypium raimondii HOM05D005263 ORTHO05D006891 1.2e-54 217.2 168 68.5
CAN.G473.163 Capsicum annuum HOM05D005263 ORTHO05D006891 2.0e-54 216.5 204 57.4
Lj1g0009319 Lotus japonicus HOM05D005263 ORTHO05D006891 2.6e-54 216.1 167 67.7
Medtr7g084560 Medicago truncatula HOM05D005263 ORTHO05D006891 2.6e-54 216.1 166 69.3
CSS0005310 Camellia sinensis var. sinensis HOM05D005263 ORTHO05D006891 4.4e-54 215.3 176 65.9
Gohir.D09G000101 Gossypium hirsutum HOM05D005263 ORTHO05D006891 4.4e-54 215.3 168 67.9
Hma1.2p1_0265F.1_g106760 Hydrangea macrophylla HOM05D005263 ORTHO05D006891 4.4e-54 215.3 187 63.1
Atru.chr6.2720 Acer truncatum HOM05D005263 ORTHO05D006891 7.5e-54 214.5 172 66.9
QL02p068698 Quercus lobata HOM05D005263 ORTHO05D006891 1.3e-53 213.8 168 69.6
TPR.G26435 Trifolium pratense HOM05D005263 ORTHO05D006891 2.9e-53 212.6 167 65.3
Sp3g00030 Schrenkiella parvula HOM05D005263 ORTHO05D006891 3.7e-53 212.2 170 68.2
Aa31LG5G11240 Aethionema arabicum HOM05D005263 ORTHO05D006891 4.9e-53 211.8 176 65.9
PGR142G1885 Punica granatum HOM05D005263 ORTHO05D006891 4.9e-53 211.8 173 66.5
Glyma.16G046000 Glycine max HOM05D005263 ORTHO05D006891 6.4e-53 211.5 167 65.9
ATR0582G042 Amborella trichopoda HOM05D005263 ORTHO05D006891 8.3e-53 211.1 173 63.0
Aqoxy5G03006 Aquilegia oxysepala HOM05D005263 ORTHO05D006891 8.3e-53 211.1 169 66.3
AT3G02060 Arabidopsis thaliana HOM05D005263 ORTHO05D006891 8.3e-53 211.1 171 67.8
CARHR074870 Cardamine hirsuta HOM05D005263 ORTHO05D006891 8.3e-53 211.1 171 68.4
RcHm_v2.0_Chr2g0176681 Rosa chinensis HOM05D005263 ORTHO05D006891 8.3e-53 211.1 171 65.5
Carub.0003s0003 Capsella rubella HOM05D005263 ORTHO05D006891 1.4e-52 210.3 171 67.8
Thhalv10020076m.g Eutrema salsugineum HOM05D005263 ORTHO05D006891 1.4e-52 210.3 171 66.1
CANSAT64G2729 Cannabis sativa HOM05D005263 ORTHO05D006891 1.9e-52 209.9 178 63.5
CsaV3_5G021940 Cucumis sativus L. HOM05D005263 ORTHO05D006891 1.9e-52 209.9 174 64.9
Glyma.19G106000 Glycine max HOM05D005263 ORTHO05D006891 1.9e-52 209.9 167 66.5
AL3G10030 Arabidopsis lyrata HOM05D005263 ORTHO05D006891 2.4e-52 209.5 171 67.3
Haze_14959 Corylus avellana HOM05D005263 ORTHO05D006891 2.4e-52 209.5 169 68.6
Lalb_Chr14g0363581 Lupinus albus HOM05D005263 ORTHO05D006891 2.4e-52 209.5 176 64.8
Actinidia36248 Actinidia chinensis HOM05D005263 ORTHO05D006891 3.2e-52 209.1 173 67.1
BcaNung05595 Brassica carinata HOM05D005263 ORTHO05D006891 3.2e-52 209.1 170 66.5
TWI60G0166 Tripterygium wilfordii HOM05D005263 ORTHO05D006891 3.2e-52 209.1 169 67.5
Sabra14G0109200 Salix brachista HOM05D005263 ORTHO05D006891 4.1e-52 208.8 169 69.2
CiPaw.03G000200 Carya illinoinensis HOM05D005263 ORTHO05D006891 5.4e-52 208.4 167 67.1
Sed0001423 Sechium edule HOM05D005263 ORTHO05D006891 5.4e-52 208.4 168 66.1
unitig_52.g17689 Utricularia gibba HOM05D005263 ORTHO05D006891 5.4e-52 208.4 190 61.1
MELO3C005086.2 Cucumis melo HOM05D005263 ORTHO05D006891 1.2e-51 207.2 174 64.9
EL10Ac6g13898 Beta vulgaris HOM05D005263 ORTHO05D006891 1.6e-51 206.8 170 64.1
Potri.002G237400 Populus trichocarpa HOM05D005263 ORTHO05D006891 1.6e-51 206.8 171 66.7
arahy.Tifrunner.gnm1.ann1.J2Y82Q Arachis hypogaea HOM05D005263 ORTHO05D006891 2.7e-51 206.1 168 64.9
arahy.Tifrunner.gnm1.ann1.R16MRH Arachis hypogaea HOM05D005263 ORTHO05D006891 2.7e-51 206.1 168 64.9
Potri.014G145000 Populus trichocarpa HOM05D005263 ORTHO05D006891 2.7e-51 206.1 169 66.9
Prupe.3G314900 Prunus persica HOM05D005263 ORTHO05D006891 2.7e-51 206.1 173 64.2
Ciclev10017439m.g Citrus clementina HOM05D005263 ORTHO05D006891 3.5e-51 205.7 181 61.9
Sc07g0003930 Simmondsia chinensis HOM05D005263 ORTHO05D006891 3.5e-51 205.7 170 64.7
Phvul.001G099500 Phaseolus vulgaris HOM05D005263 ORTHO05D006891 4.6e-51 205.3 167 64.7
vmacro22255 Vaccinium macrocarpon HOM05D005263 ORTHO05D006891 4.6e-51 205.3 175 64.0
Eucgr.I01574 Eucalyptus grandis HOM05D005263 ORTHO05D006891 6.0e-51 204.9 148 70.3
MD17G1004500 Malus domestica HOM05D005263 ORTHO05D006891 3.0e-50 202.6 186 61.3
Sabra02G0180900 Salix brachista HOM05D005263 ORTHO05D006891 6.6e-50 201.4 171 65.5
FvH4_6g54430 Fragaria vesca HOM05D005263 ORTHO05D006891 8.6e-50 201.1 166 65.1
FAN02G2182 Fragaria x ananassa HOM05D005263 ORTHO05D006891 8.6e-50 201.1 166 65.1
DCAR_000962 Daucus carota HOM05D005263 ORTHO05D006891 4.3e-49 198.7 170 65.3
FAN05G5194 Fragaria x ananassa HOM05D005263 ORTHO05D006891 5.6e-49 198.4 166 64.5
FAN09G1249 Fragaria x ananassa HOM05D005263 ORTHO05D006891 5.6e-49 198.4 166 64.5
FAN14G4399 Fragaria x ananassa HOM05D005263 ORTHO05D006891 5.6e-49 198.4 166 64.5
ClCG01G007920 Citrullus lanatus HOM05D005263 ORTHO05D006891 1.8e-47 193.4 158 65.8
Lj7C619G12 Lonicera japonica HOM05D005263 ORTHO05D006891 6.8e-47 191.4 155 65.8
HPP92_009765 Vanilla planifolia HOM05D005263 ORTHO05D006891 3.4e-46 189.1 170 64.1
AUR62017472 Chenopodium quinoa HOM05D005263 ORTHO05D006891 1.6e-43 180.3 166 60.2
Hma1.2p1_0265F.1_g106770 Hydrangea macrophylla HOM05D005263 ORTHO05D006891 3.9e-42 175.6 112 77.7
FAN09G0287 Fragaria x ananassa HOM05D005263 ORTHO05D006891 3.6e-40 169.1 164 57.9
Lsat_1_v5_gn_2_95241 Lactuca sativa HOM05D005263 ORTHO05D006891 1.2e-38 164.1 182 48.9
HPP92_009750 Vanilla planifolia HOM05D005263 ORTHO05D006891 1.2e-38 164.1 136 65.4
HanXRQChr14g0451541 Helianthus annuus HOM05D005263 ORTHO05D006891 9.9e-38 161.0 178 50.0
SEGI_32569 Sequoiadendron giganteum HOM05D005263 ORTHO05D006891 4.9e-37 158.7 166 52.4
ECA238G3309 Erigeron canadensis HOM05D005263 ORTHO05D006891 1.9e-36 156.8 186 45.2
Gohir.A09G000074 Gossypium hirsutum HOM05D005263 ORTHO05D006891 9.5e-33 144.4 116 64.7
Rhsim10G0000700 Rhododendron simsii HOM05D005263 ORTHO05D006891 3.4e-30 136.0 124 60.5
Mapoly0015s0011 Marchantia polymorpha HOM05D005263 ORTHO05D006891 1.0e-26 124.4 187 36.9
AagrBONN_evm.TU.Sc2ySwM_117.63 Anthoceros agrestis HOM05D005263 ORTHO05D006891 6.2e-24 115.2 154 42.2
BolC9t52937H Brassica oleracea HOM05D005263 ORTHO05D006891 4.0e-23 112.5 156 45.5
CBR_g69987 Chara braunii HOM05D005263 ORTHO05D006891 7.6e-22 108.2 175 36.6
SMO364G0436 Selaginella moellendorffii HOM05D005263 ORTHO05D006891 1.0e-18 97.8 125 41.6
BcaC01g05768 Brassica carinata HOM05D005263 ORTHO05D006891 1.1e-17 94.4 68 69.1
Cc07_g01440 Coffea canephora HOM05D005263 ORTHO05D006891 1.1e-17 94.4 62 75.8
GSVIVG01032955001 Vitis vinifera HOM05D005263 ORTHO05D006891 4.8e-16 89.0 62 72.6
CDE02G2322 Ceratophyllum demersum HOM05D005263 ORTHO05D006891 6.2e-16 88.6 62 69.4
BcaNung05596 Brassica carinata HOM05D005263 ORTHO05D006891 2.4e-15 86.7 62 69.4
Manes.11G073900 Manihot esculenta HOM05D005263 ORTHO05D006891 6.9e-15 85.1 47 83.0
Os11g0533100 Oryza sativa ssp. japonica HOM05D005263 ORTHO05D006891 6.4e-13 78.6 142 35.9
Pp3c2_18110 Physcomitrium patens HOM05D005263 ORTHO05D006891 2.1e-08 63.5 62 51.6
MCO01G164 Micromonas commoda HOM05D005263 ORTHO05D006891 3.7e-08 62.8 127 31.5


User provided reference genes

Program Settings