Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold1G00448 Striga asiatica HOM05D006016 ORTHO05D007553 1.5e-181 639.4 335 100.0
Migut.D00263 Erythranthe guttata HOM05D006016 ORTHO05D007553 5.9e-125 451.4 332 72.0
Oeu011169.1 Olea europaea HOM05D006016 ORTHO05D007553 2.5e-123 446.0 272 83.8
MSTRG.18215 Avicennia marina HOM05D006016 ORTHO05D007553 8.8e-121 437.6 336 70.8
GSVIVG01011095001 Vitis vinifera HOM05D006016 ORTHO05D007553 8.2e-119 431.0 337 71.2
CSS0041846 Camellia sinensis var. sinensis HOM05D006016 ORTHO05D007553 1.4e-118 430.3 312 75.6
Nitab4.5_0006180g0080 Nicotiana tabacum HOM05D006016 ORTHO05D007553 1.2e-117 427.2 328 71.6
Haze_04746 Corylus avellana HOM05D006016 ORTHO05D007553 1.0e-116 424.1 335 69.9
Nitab4.5_0007392g0030 Nicotiana tabacum HOM05D006016 ORTHO05D007553 1.3e-116 423.7 328 70.4
Cfa006104 Carpinus fangiana HOM05D006016 ORTHO05D007553 6.5e-116 421.4 335 69.9
QL12p022630 Quercus lobata HOM05D006016 ORTHO05D007553 1.2e-114 417.2 335 69.9
Eucgr.K03395 Eucalyptus grandis HOM05D006016 ORTHO05D007553 4.7e-114 415.2 277 81.6
Hma1.2p1_0628F.1_g191900 Hydrangea macrophylla HOM05D006016 ORTHO05D007553 4.7e-114 415.2 266 80.8
Nn1g02145 Nelumbo nucifera HOM05D006016 ORTHO05D007553 6.1e-114 414.8 314 74.2
Prupe.8G244900 Prunus persica HOM05D006016 ORTHO05D007553 1.4e-113 413.7 337 70.6
PGR044G1280 Punica granatum HOM05D006016 ORTHO05D007553 1.2e-112 410.6 310 73.5
CAN.G962.6 Capsicum annuum HOM05D006016 ORTHO05D007553 4.4e-112 408.7 276 78.3
Eucgr.K03393 Eucalyptus grandis HOM05D006016 ORTHO05D007553 5.7e-112 408.3 272 82.0
Aqoxy2G03243 Aquilegia oxysepala HOM05D006016 ORTHO05D007553 9.7e-112 407.5 270 77.4
CiPaw.07G094500 Carya illinoinensis HOM05D006016 ORTHO05D007553 1.3e-111 407.1 335 69.6
MD11G1289700 Malus domestica HOM05D006016 ORTHO05D007553 1.3e-111 407.1 271 79.0
Duzib138G0992 Durio zibethinus HOM05D006016 ORTHO05D007553 4.8e-111 405.2 307 71.7
COL.COLO4_09142 Corchorus olitorius HOM05D006016 ORTHO05D007553 6.3e-111 404.8 272 78.3
Solyc09g064790.3 Solanum lycopersicum HOM05D006016 ORTHO05D007553 8.2e-111 404.4 320 69.1
PGSC0003DMG400000944 Solanum tuberosum HOM05D006016 ORTHO05D007553 8.2e-111 404.4 270 78.5
Sopen09g026490 Solanum pennellii HOM05D006016 ORTHO05D007553 1.4e-110 403.7 291 74.6
Sed0013000 Sechium edule HOM05D006016 ORTHO05D007553 1.8e-110 403.3 308 74.0
Manes.01G210000 Manihot esculenta HOM05D006016 ORTHO05D007553 4.1e-110 402.1 271 77.9
MD03G1268900 Malus domestica HOM05D006016 ORTHO05D007553 5.3e-110 401.7 335 68.1
SalBow4G2498 Salvia bowleyana HOM05D006016 ORTHO05D007553 1.2e-109 400.6 328 69.5
Sc05g0005010 Simmondsia chinensis HOM05D006016 ORTHO05D007553 1.2e-109 400.6 276 76.4
ClCG07G000070 Citrullus lanatus HOM05D006016 ORTHO05D007553 1.6e-109 400.2 314 72.0
MELO3C014346.2 Cucumis melo HOM05D006016 ORTHO05D007553 1.6e-109 400.2 275 79.3
CANSAT80G0718 Cannabis sativa HOM05D006016 ORTHO05D007553 2.0e-109 399.8 268 78.7
DCAR_002754 Daucus carota HOM05D006016 ORTHO05D007553 2.0e-109 399.8 335 67.2
Thecc.01G283800 Theobroma cacao HOM05D006016 ORTHO05D007553 2.7e-109 399.4 271 78.6
AUR62004906 Chenopodium quinoa HOM05D006016 ORTHO05D007553 3.5e-109 399.1 273 75.5
EL10Ac4g09090 Beta vulgaris HOM05D006016 ORTHO05D007553 4.5e-109 398.7 275 74.5
Cc02_g34480 Coffea canephora HOM05D006016 ORTHO05D007553 7.7e-109 397.9 311 69.5
Potri.014G138500 Populus trichocarpa HOM05D006016 ORTHO05D007553 7.7e-109 397.9 283 71.7
Gorai.004G083400 Gossypium raimondii HOM05D006016 ORTHO05D007553 1.7e-108 396.7 276 77.2
Peaxi162Scf00104g00220 Petunia axillaris HOM05D006016 ORTHO05D007553 6.5e-108 394.8 280 73.2
Gohir.A08G069800 Gossypium hirsutum HOM05D006016 ORTHO05D007553 1.1e-107 394.0 271 77.1
RcHm_v2.0_Chr1g0321311 Rosa chinensis HOM05D006016 ORTHO05D007553 7.2e-107 391.3 271 76.0
FvH4_7g02610 Fragaria vesca HOM05D006016 ORTHO05D007553 3.6e-106 389.0 271 75.6
CARHR124900 Cardamine hirsuta HOM05D006016 ORTHO05D007553 6.1e-106 388.3 273 73.3
PSO170G1401 Papaver somniferum HOM05D006016 ORTHO05D007553 6.1e-106 388.3 275 73.1
PSO407G0301 Papaver somniferum HOM05D006016 ORTHO05D007553 6.1e-106 388.3 275 73.1
Glyma.10G024400 Glycine max HOM05D006016 ORTHO05D007553 1.4e-105 387.1 283 71.7
Medtr1g072640 Medicago truncatula HOM05D006016 ORTHO05D007553 1.8e-105 386.7 326 66.6
Hund06953 Selenicereus undatus HOM05D006016 ORTHO05D007553 1.8e-105 386.7 343 65.6
Rhsim01G0276200 Rhododendron simsii HOM05D006016 ORTHO05D007553 3.0e-105 386.0 428 55.1
Ciclev10020923m.g Citrus clementina HOM05D006016 ORTHO05D007553 1.2e-104 384.0 271 76.0
Aa31LG4G3290 Aethionema arabicum HOM05D006016 ORTHO05D007553 1.5e-104 383.6 278 73.4
FAN03G2867 Fragaria x ananassa HOM05D006016 ORTHO05D007553 1.5e-104 383.6 346 63.9
Cpa.g.sc485.5 Carica papaya HOM05D006016 ORTHO05D007553 2.0e-104 383.3 249 81.1
arahy.Tifrunner.gnm1.ann1.NXI6YJ Arachis hypogaea HOM05D006016 ORTHO05D007553 3.4e-104 382.5 280 72.5
HanXRQChr01g0002401 Helianthus annuus HOM05D006016 ORTHO05D007553 3.4e-104 382.5 276 71.0
Thhalv10001558m.g Eutrema salsugineum HOM05D006016 ORTHO05D007553 4.4e-104 382.1 279 73.5
TAR633G0970 Trochodendron aralioides HOM05D006016 ORTHO05D007553 7.5e-104 381.3 249 81.9
Carub.0004s3083 Capsella rubella HOM05D006016 ORTHO05D007553 2.8e-103 379.4 276 72.8
Ca_09774_v3 Cicer arietinum L. HOM05D006016 ORTHO05D007553 2.8e-103 379.4 271 76.4
arahy.Tifrunner.gnm1.ann1.Q6PPUG Arachis hypogaea HOM05D006016 ORTHO05D007553 8.3e-103 377.9 279 71.3
BcaB02g08738 Brassica carinata HOM05D006016 ORTHO05D007553 1.1e-102 377.5 270 73.3
FAN01G1545 Fragaria x ananassa HOM05D006016 ORTHO05D007553 1.8e-102 376.7 335 64.2
CsaV3_6G036870 Cucumis sativus L. HOM05D006016 ORTHO05D007553 2.4e-102 376.3 299 71.6
Atru.chr5.1361 Acer truncatum HOM05D006016 ORTHO05D007553 3.1e-102 375.9 271 74.2
AUR62032753 Chenopodium quinoa HOM05D006016 ORTHO05D007553 9.1e-102 374.4 247 76.9
Sp4g30040 Schrenkiella parvula HOM05D006016 ORTHO05D007553 9.1e-102 374.4 311 66.9
ATR0626G088 Amborella trichopoda HOM05D006016 ORTHO05D007553 1.6e-101 373.6 268 73.5
THA.LOC104823056 Tarenaya hassleriana HOM05D006016 ORTHO05D007553 2.7e-101 372.9 278 73.0
BraA05t18997Z Brassica rapa HOM05D006016 ORTHO05D007553 3.5e-101 372.5 271 73.1
Lsat_1_v5_gn_5_187441 Lactuca sativa HOM05D006016 ORTHO05D007553 4.5e-101 372.1 276 71.0
CDE01G0302 Ceratophyllum demersum HOM05D006016 ORTHO05D007553 1.3e-100 370.5 303 66.3
unitig_61.g26325 Utricularia gibba HOM05D006016 ORTHO05D007553 1.9e-99 366.7 268 73.1
AL4G47720 Arabidopsis lyrata HOM05D006016 ORTHO05D007553 2.5e-99 366.3 274 70.8
TPR.G1544 Trifolium pratense HOM05D000563 ORTHO05D000536 3.2e-99 365.9 309 67.6
BolC4t21679H Brassica oleracea HOM05D006016 ORTHO05D007553 1.0e-97 360.9 311 65.0
Lalb_Chr21g0306561 Lupinus albus HOM05D006016 ORTHO05D007553 1.4e-97 360.5 276 71.0
BolSC55t61226H Brassica oleracea HOM05D006016 ORTHO05D007553 3.0e-97 359.4 311 64.6
TWI14G0073 Tripterygium wilfordii HOM05D006016 ORTHO05D007553 3.0e-97 359.4 271 71.6
ECA248G0902 Erigeron canadensis HOM05D006016 ORTHO05D007553 4.4e-96 355.5 252 72.2
A05p00010 Brassica napus HOM05D006016 ORTHO05D007553 5.7e-96 355.1 262 72.5
Phvul.007G169400 Phaseolus vulgaris HOM05D006016 ORTHO05D007553 6.3e-95 351.7 281 69.8
arahy.Tifrunner.gnm1.ann1.95RMVD Arachis hypogaea HOM05D006016 ORTHO05D007553 3.1e-94 349.4 271 69.7
Os05g0393400 Oryza sativa ssp. japonica HOM05D006016 ORTHO05D007553 7.0e-94 348.2 311 61.4
Lj2C1178T3 Lonicera japonica HOM05D006016 ORTHO05D007553 3.5e-93 345.9 234 76.1
HPP92_025128 Vanilla planifolia HOM05D006016 ORTHO05D007553 1.3e-92 344.0 337 59.6
BcaC02g12797 Brassica carinata HOM05D006016 ORTHO05D007553 6.6e-92 341.7 292 65.8
BolSC55t61222H Brassica oleracea HOM05D006016 ORTHO05D007553 1.5e-91 340.5 269 68.8
Sabra14G0104500 Salix brachista HOM05D006016 ORTHO05D007553 4.3e-91 339.0 305 60.3
AT2G48120 Arabidopsis thaliana HOM05D006016 ORTHO05D007553 8.0e-90 334.7 228 72.8
Lj5g0023557 Lotus japonicus HOM05D006016 ORTHO05D007553 4.0e-89 332.4 283 66.8
BNapus_Darmor_BZH_scaffold_188p00120 Brassica napus HOM05D006016 ORTHO05D007553 8.9e-89 331.3 225 74.2
BNapus_Darmor_BZH_scaffold_188p00130 Brassica napus HOM05D006016 ORTHO05D007553 1.5e-88 330.5 234 73.1
Psat6g138080 Pisum sativum HOM05D006016 ORTHO05D007553 3.4e-88 329.3 228 76.3
Gohir.D08G079100 Gossypium hirsutum HOM05D006016 ORTHO05D007553 1.1e-86 324.3 271 67.2
Zm00001eb287380 Zea mays HOM05D006016 ORTHO05D007553 4.1e-86 322.4 249 67.5
Dinv32962 Davidia involucrata HOM05D006016 ORTHO05D007553 1.8e-81 307.0 185 82.7
BcaC02g12566 Brassica carinata HOM05D006016 ORTHO05D007553 4.0e-81 305.8 293 61.1
Hma1.2p1_0628F.1_g191890 Hydrangea macrophylla HOM05D006016 ORTHO05D007553 6.8e-81 305.1 210 76.2
vmacro14936 Vaccinium macrocarpon HOM05D006016 ORTHO05D007553 7.0e-78 295.0 337 54.9
SEGI_37912 Sequoiadendron giganteum HOM05D006016 ORTHO05D007553 4.7e-74 282.3 257 60.7
arahy.Tifrunner.gnm1.ann1.9IJ3BZ Arachis hypogaea HOM05D006016 ORTHO05D007553 4.0e-73 279.3 292 56.8
QL10p008835 Quercus lobata HOM05D006016 ORTHO05D007553 1.6e-69 267.3 187 75.9
BolSC55t61219H Brassica oleracea HOM05D006016 ORTHO05D007553 3.9e-68 262.7 200 70.5
Actinidia21099 Actinidia chinensis HOM05D006016 ORTHO05D007553 1.2e-66 257.7 263 58.6
SMO360G0019 Selaginella moellendorffii HOM05D006016 ORTHO05D007553 1.5e-64 250.8 253 53.8
BolSC55t61223H Brassica oleracea HOM05D006016 ORTHO05D007553 2.9e-63 246.5 212 64.6
Mapoly0059s0024 Marchantia polymorpha HOM05D006016 ORTHO05D007553 2.5e-59 233.4 251 52.2
Pp3c5_15510 Physcomitrium patens HOM05D006016 ORTHO05D007553 6.4e-55 218.8 328 44.2
Lj9C654T2 Lonicera japonica HOM05D006016 ORTHO05D007553 2.5e-51 206.8 192 58.3
Glyma.02G149402 Glycine max HOM05D006016 ORTHO05D007553 1.3e-47 194.5 147 74.1
AagrBONN_evm.TU.Sc2ySwM_228.5509 Anthoceros agrestis HOM05D006016 ORTHO05D007553 3.3e-43 179.9 173 51.4
BraA05t18995Z Brassica rapa HOM05D006016 ORTHO05D007553 2.4e-41 173.7 128 67.2
BNapus_Darmor_BZH_scaffold_188p00100 Brassica napus HOM05D006016 ORTHO05D007553 5.5e-38 162.5 125 64.8
Actinidia24878 Actinidia chinensis HOM05D006016 ORTHO05D007553 3.7e-34 149.8 184 51.6
BNapus_Darmor_BZH_scaffold_188p00090 Brassica napus HOM05D001484 ORTHO05D007553 4.0e-33 146.4 113 73.5
Oeu001432.1 Olea europaea HOM05D006016 ORTHO05D007553 1.0e-28 131.7 98 68.4
QL09p051040 Quercus lobata HOM05D006016 ORTHO05D007553 8.2e-26 122.1 120 55.8
CBR_g23747 Chara braunii HOM05D006016 ORTHO05D007553 6.9e-25 119.0 238 35.3
AUR62004907 Chenopodium quinoa HOM05D006016 ORTHO05D007553 1.4e-22 111.3 78 73.1
QL09p050526 Quercus lobata HOM05D006016 ORTHO05D337571 6.7e-20 102.4 101 56.4
Dinv13370 Davidia involucrata HOM05D006016 ORTHO05D007553 1.7e-18 97.8 108 54.6
BcaC08g43234 Brassica carinata HOM05D006016 ORTHO05D007553 9.1e-17 92.0 68 58.8
MBI04_g32261_MAGBIO Magnolia biondii HOM05D006016 ORTHO05D007553 1.2e-13 81.6 72 62.5
Dinv01676 Davidia involucrata HOM05D006016 ORTHO05D007553 1.1e-11 75.1 65 67.7
Dinv16891 Davidia involucrata HOM05D006016 ORTHO05D007553 5.7e-11 72.8 65 69.2
vmacro10242 Vaccinium macrocarpon HOM05D002150 ORTHO05D002191 7.0e-09 65.9 180 35.0
QL09p050966 Quercus lobata HOM05D001484 ORTHO05D001564 2.6e-08 63.9 35 71.4
vmacro04822 Vaccinium macrocarpon HOM05D005445 ORTHO05D007043 6.5e-07 59.3 197 31.5
Lj9C654T3 Lonicera japonica HOM05D006016 ORTHO05D007553 1.9e-06 57.8 46 71.7
vmacro07726 Vaccinium macrocarpon HOM05D005445 ORTHO05D007043 3.2e-06 57.0 181 33.7
BolC6t35694H Brassica oleracea HOM05D006016 ORTHO05D007553 9.4e-06 55.5 62 54.8


User provided reference genes

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