Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold1G00284 Striga asiatica HOM05D005263 ORTHO05D006891 5.4e-245 850.5 416 100.0
SGA_v2.0_scaffold122G33171 Striga asiatica HOM05D005263 ORTHO05D006891 2.4e-67 260.4 156 84.6
SGA_v2.0_scaffold423G51441 Striga asiatica HOM05D005263 ORTHO05D399314 2.7e-63 246.9 141 86.5
Migut.F00003 Erythranthe guttata HOM05D005263 ORTHO05D006891 1.1e-59 235.0 156 75.6
SalBow4G2620 Salvia bowleyana HOM05D005263 ORTHO05D006891 1.4e-59 234.6 156 73.7
SGA_v2.0_scaffold423G51442 Striga asiatica HOM05D005263 ORTHO05D006891 1.8e-59 234.2 172 74.4
MSTRG.3034 Avicennia marina HOM05D005263 ORTHO05D006891 2.9e-57 226.9 156 73.1
GSVIVG01032955001 Vitis vinifera HOM05D005263 ORTHO05D006891 6.5e-57 225.7 156 70.5
CSS0005310 Camellia sinensis var. sinensis HOM05D005263 ORTHO05D006891 1.5e-56 224.6 156 71.2
CiPaw.03G000400 Carya illinoinensis HOM05D005263 ORTHO05D006891 1.9e-56 224.2 156 71.2
Aqoxy5G03006 Aquilegia oxysepala HOM05D005263 ORTHO05D006891 3.2e-56 223.4 156 71.2
Gohir.A09G000037 Gossypium hirsutum HOM05D005263 ORTHO05D006891 4.2e-56 223.0 156 70.5
Gohir.D09G000101 Gossypium hirsutum HOM05D005263 ORTHO05D006891 4.2e-56 223.0 156 70.5
Gorai.006G000100 Gossypium raimondii HOM05D005263 ORTHO05D006891 4.2e-56 223.0 156 70.5
Psat3g091960 Pisum sativum HOM05D005263 ORTHO05D006891 7.2e-56 222.2 156 70.5
Sed0001423 Sechium edule HOM05D005263 ORTHO05D006891 9.4e-56 221.9 156 72.4
Gohir.A09G000300 Gossypium hirsutum HOM05D005263 ORTHO05D006891 1.2e-55 221.5 156 69.9
TWI60G0166 Tripterygium wilfordii HOM05D005263 ORTHO05D006891 1.2e-55 221.5 156 70.5
CsaV3_5G021940 Cucumis sativus L. HOM05D005263 ORTHO05D006891 1.6e-55 221.1 156 71.2
Dinv33264 Davidia involucrata HOM05D005263 ORTHO05D006891 1.6e-55 221.1 156 70.5
unitig_52.g17691 Utricularia gibba HOM05D005263 ORTHO05D006891 1.6e-55 221.1 159 69.8
THA.LOC104821142 Tarenaya hassleriana HOM05D005263 ORTHO05D006891 2.7e-55 220.3 156 70.5
Cpa.g.sc70.43 Carica papaya HOM05D005263 ORTHO05D006891 3.6e-55 219.9 156 70.5
Ca_08228_v3 Cicer arietinum L. HOM05D005263 ORTHO05D006891 3.6e-55 219.9 156 69.9
MELO3C005086.2 Cucumis melo HOM05D005263 ORTHO05D006891 3.6e-55 219.9 156 70.5
Lj7C619G12 Lonicera japonica HOM05D005263 ORTHO05D006891 3.6e-55 219.9 157 68.2
Thecc.04G050600 Theobroma cacao HOM05D005263 ORTHO05D006891 4.7e-55 219.5 156 70.5
TPR.G26435 Trifolium pratense HOM05D005263 ORTHO05D006891 4.7e-55 219.5 156 69.2
Actinidia36248 Actinidia chinensis HOM05D005263 ORTHO05D006891 6.1e-55 219.2 156 69.9
Manes.11G073900 Manihot esculenta HOM05D005263 ORTHO05D006891 6.1e-55 219.2 156 69.2
TAR622G0136 Trochodendron aralioides HOM05D005263 ORTHO05D006891 6.1e-55 219.2 156 70.5
ClCG01G007920 Citrullus lanatus HOM05D005263 ORTHO05D006891 8.0e-55 218.8 156 70.5
Lalb_Chr14g0363581 Lupinus albus HOM05D005263 ORTHO05D006891 8.0e-55 218.8 156 69.2
Potri.014G145000 Populus trichocarpa HOM05D005263 ORTHO05D006891 8.0e-55 218.8 156 69.2
Lj1g0009319 Lotus japonicus HOM05D005263 ORTHO05D006891 1.0e-54 218.4 156 68.6
SGA_v2.0_scaffold274G46526 Striga asiatica HOM05D005263 ORTHO05D006891 1.0e-54 218.4 156 73.7
CANSAT64G2729 Cannabis sativa HOM05D005263 ORTHO05D006891 1.8e-54 217.6 156 70.5
QL02p068698 Quercus lobata HOM05D005263 ORTHO05D006891 1.8e-54 217.6 156 68.6
COL.COLO4_13398 Corchorus olitorius HOM05D005263 ORTHO05D006891 2.3e-54 217.2 156 69.2
Nitab4.5_0000519g0290 Nicotiana tabacum HOM05D005263 ORTHO05D006891 2.3e-54 217.2 156 68.6
Nitab4.5_0002901g0080 Nicotiana tabacum HOM05D005263 ORTHO05D006891 2.3e-54 217.2 156 68.6
Atru.chr6.2720 Acer truncatum HOM05D005263 ORTHO05D006891 3.0e-54 216.9 157 68.2
Ciclev10017439m.g Citrus clementina HOM05D005263 ORTHO05D006891 3.0e-54 216.9 156 68.6
Solyc02g094590.3 Solanum lycopersicum HOM05D005263 ORTHO05D006891 4.0e-54 216.5 156 68.6
Sopen02g039240 Solanum pennellii HOM05D005263 ORTHO05D006891 4.0e-54 216.5 156 68.6
FvH4_6g54430 Fragaria vesca HOM05D005263 ORTHO05D006891 6.7e-54 215.7 156 69.2
FAN02G2182 Fragaria x ananassa HOM05D005263 ORTHO05D006891 6.7e-54 215.7 156 69.2
RcHm_v2.0_Chr2g0176681 Rosa chinensis HOM05D005263 ORTHO05D006891 6.7e-54 215.7 156 69.2
Haze_14959 Corylus avellana HOM05D005263 ORTHO05D006891 8.8e-54 215.3 156 68.6
Glyma.16G046000 Glycine max HOM05D005263 ORTHO05D006891 8.8e-54 215.3 156 67.9
Sabra02G0180900 Salix brachista HOM05D005263 ORTHO05D006891 1.2e-53 214.9 156 69.9
DCAR_000962 Daucus carota HOM05D005263 ORTHO05D006891 1.5e-53 214.5 157 67.5
Duzib147G0290 Durio zibethinus HOM05D005263 ORTHO05D006891 2.0e-53 214.2 156 69.2
FAN05G5194 Fragaria x ananassa HOM05D005263 ORTHO05D006891 2.0e-53 214.2 156 68.6
Medtr7g084560 Medicago truncatula HOM05D005263 ORTHO05D006891 2.0e-53 214.2 156 68.6
PGR142G1885 Punica granatum HOM05D005263 ORTHO05D006891 2.0e-53 214.2 156 68.6
Sabra14G0109200 Salix brachista HOM05D005263 ORTHO05D006891 2.0e-53 214.2 156 67.3
arahy.Tifrunner.gnm1.ann1.J2Y82Q Arachis hypogaea HOM05D005263 ORTHO05D006891 2.6e-53 213.8 156 68.6
arahy.Tifrunner.gnm1.ann1.R16MRH Arachis hypogaea HOM05D005263 ORTHO05D006891 2.6e-53 213.8 156 68.6
CAN.G473.163 Capsicum annuum HOM05D005263 ORTHO05D006891 2.6e-53 213.8 156 68.6
FAN09G1249 Fragaria x ananassa HOM05D005263 ORTHO05D006891 2.6e-53 213.8 156 69.2
FAN14G4399 Fragaria x ananassa HOM05D005263 ORTHO05D006891 2.6e-53 213.8 156 69.2
MD17G1004500 Malus domestica HOM05D005263 ORTHO05D006891 2.6e-53 213.8 156 69.2
EL10Ac6g13898 Beta vulgaris HOM05D005263 ORTHO05D006891 3.3e-53 213.4 156 68.6
Hma1.2p1_0265F.1_g106760 Hydrangea macrophylla HOM05D005263 ORTHO05D006891 5.7e-53 212.6 156 67.9
Potri.002G237400 Populus trichocarpa HOM05D005263 ORTHO05D006891 5.7e-53 212.6 156 69.2
Cc07_g01440 Coffea canephora HOM05D005263 ORTHO05D006891 9.7e-53 211.8 156 67.9
Thhalv10020076m.g Eutrema salsugineum HOM05D005263 ORTHO05D006891 1.3e-52 211.5 156 66.7
Glyma.19G106000 Glycine max HOM05D005263 ORTHO05D006891 1.3e-52 211.5 156 66.0
QL02p068621 Quercus lobata HOM05D005263 ORTHO05D006891 1.3e-52 211.5 156 67.3
AUR62017472 Chenopodium quinoa HOM05D005263 ORTHO05D006891 2.2e-52 210.7 156 68.6
Sp3g00030 Schrenkiella parvula HOM05D005263 ORTHO05D006891 3.7e-52 209.9 156 66.0
Aa31LG5G11240 Aethionema arabicum HOM05D005263 ORTHO05D006891 4.8e-52 209.5 156 66.0
Carub.0003s0003 Capsella rubella HOM05D005263 ORTHO05D006891 4.8e-52 209.5 156 66.0
Prupe.3G314900 Prunus persica HOM05D005263 ORTHO05D006891 4.8e-52 209.5 156 67.9
VMungo1383G1213 Vigna mungo HOM05D005263 ORTHO05D006891 6.3e-52 209.1 156 65.4
AL3G10030 Arabidopsis lyrata HOM05D005263 ORTHO05D006891 8.2e-52 208.8 156 66.0
BcaNung05595 Brassica carinata HOM05D005263 ORTHO05D006891 8.2e-52 208.8 156 66.0
ATR0582G042 Amborella trichopoda HOM05D005263 ORTHO05D006891 1.1e-51 208.4 156 66.0
BcaNung05596 Brassica carinata HOM05D005263 ORTHO05D006891 1.1e-51 208.4 156 65.4
Phvul.001G099500 Phaseolus vulgaris HOM05D005263 ORTHO05D006891 1.4e-51 208.0 156 64.7
CDE02G2322 Ceratophyllum demersum HOM05D005263 ORTHO05D006891 1.8e-51 207.6 156 66.7
SGA_v2.0_scaffold87G27186 Striga asiatica HOM05D005263 ORTHO05D006891 1.8e-51 207.6 156 69.9
PSO478G0722 Papaver somniferum HOM05D005263 ORTHO05D006891 2.4e-51 207.2 156 66.0
AT3G02060 Arabidopsis thaliana HOM05D005263 ORTHO05D006891 7.0e-51 205.7 156 64.7
CARHR074870 Cardamine hirsuta HOM05D005263 ORTHO05D006891 9.1e-51 205.3 156 64.7
PSO017G0637 Papaver somniferum HOM05D005263 ORTHO05D006891 1.6e-50 204.5 156 65.4
ECA238G3309 Erigeron canadensis HOM05D005263 ORTHO05D006891 1.9e-48 197.6 161 60.9
Eucgr.I01574 Eucalyptus grandis HOM05D005263 ORTHO05D006891 9.4e-48 195.3 156 66.0
HanXRQChr14g0451541 Helianthus annuus HOM05D005263 ORTHO05D006891 2.3e-46 190.7 161 61.5
Peaxi162Scf00420g00940 Petunia axillaris HOM05D005263 ORTHO05D006891 7.5e-45 185.7 156 63.5
CSS0025694 Camellia sinensis var. sinensis HOM05D005263 ORTHO05D006891 6.3e-44 182.6 134 66.4
Zm00001eb113530 Zea mays HOM05D005263 ORTHO05D006891 1.2e-42 178.3 156 57.1
HPP92_009750 Vanilla planifolia HOM05D005263 ORTHO05D006891 4.5e-42 176.4 156 57.7
Lsat_1_v5_gn_2_95241 Lactuca sativa HOM05D005263 ORTHO05D006891 1.3e-41 174.9 161 56.5
HPP92_009765 Vanilla planifolia HOM05D005263 ORTHO05D006891 2.9e-41 173.7 156 57.1
Mapoly0015s0011 Marchantia polymorpha HOM05D005263 ORTHO05D006891 4.1e-35 153.3 156 51.3
AagrBONN_evm.TU.Sc2ySwM_117.63 Anthoceros agrestis HOM05D005263 ORTHO05D006891 1.2e-29 135.2 156 46.2
Nn4g22084 Nelumbo nucifera HOM05D005263 ORTHO05D006891 5.9e-26 122.9 100 66.0
Hma1.2p1_0265F.1_g106780 Hydrangea macrophylla HOM05D005263 ORTHO05D006891 4.7e-23 113.2 80 66.2
Hma1.2p1_0265F.1_g106770 Hydrangea macrophylla HOM05D005263 ORTHO05D006891 8.9e-22 109.0 86 66.3
Oeu048685.1 Olea europaea HOM05D005263 ORTHO05D006891 1.2e-21 108.6 68 73.5
SMO364G0436 Selaginella moellendorffii HOM05D005263 ORTHO05D006891 1.5e-21 108.2 156 41.7
CBR_g56393 Chara braunii HOM05D000409 ORTHO05D000184 2.9e-20 104.0 147 39.5
vmacro22254 Vaccinium macrocarpon HOM05D005263 ORTHO05D006891 3.2e-19 100.5 52 94.2
QL02p068671 Quercus lobata HOM05D005263 ORTHO05D006891 2.0e-18 97.8 52 90.4
SGA_v2.0_scaffold340G49288 Striga asiatica HOM05D024946 ORTHO05D401788 1.2e-15 88.6 66 78.8
PGSC0003DMG400020233 Solanum tuberosum HOM05D005263 ORTHO05D006891 4.4e-13 80.1 50 74.0
BcaC01g05768 Brassica carinata HOM05D005263 ORTHO05D006891 1.9e-11 74.7 103 43.7
MCO01G164 Micromonas commoda HOM05D005263 ORTHO05D006891 2.3e-09 67.8 53 58.5
Zm00001eb285440 Zea mays HOM05D000915 ORTHO05D001662 1.1e-08 65.5 55 49.1


User provided reference genes

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