Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold193G40639 Striga asiatica HOM05D000104 ORTHO05D004363 1.2e-71 273.1 140 100.0
SGA_v2.0_scaffold269G46291 Striga asiatica HOM05D000104 ORTHO05D004363 8.7e-30 134.0 70 100.0
SalBow4G3014 Salvia bowleyana HOM05D000104 ORTHO05D004363 1.5e-29 133.3 87 79.3
Migut.A00510 Erythranthe guttata HOM05D000104 ORTHO05D004363 1.9e-29 132.9 81 86.4
MSTRG.11830 Avicennia marina HOM05D000104 ORTHO05D004363 4.3e-29 131.7 87 77.0
SGA_v2.0_scaffold27G11711 Striga asiatica HOM05D000104 ORTHO05D004363 5.6e-29 131.3 70 95.7
Oeu007492.1 Olea europaea HOM05D000104 ORTHO05D004363 7.4e-29 131.0 86 81.4
DCAR_002184 Daucus carota HOM05D007440 ORTHO05D004363 2.8e-28 129.0 77 85.7
Oeu026040.2 Olea europaea HOM05D000104 ORTHO05D004363 3.6e-28 128.6 70 92.9
Dinv09442 Davidia involucrata HOM05D000104 ORTHO05D004363 1.8e-27 126.3 82 85.4
Dinv37465 Davidia involucrata HOM05D000104 ORTHO05D004363 5.3e-27 124.8 76 85.5
Eucgr.D01125 Eucalyptus grandis HOM05D000104 ORTHO05D004363 9.0e-27 124.0 84 77.4
MELO3C020235.2 Cucumis melo HOM05D000104 ORTHO05D004363 1.2e-26 123.6 85 75.3
CsaV3_3G021080 Cucumis sativus L. HOM05D000104 ORTHO05D004363 1.2e-26 123.6 85 75.3
CsaV3_4G017770 Cucumis sativus L. HOM05D000104 ORTHO05D004363 1.2e-26 123.6 85 75.3
Lj7C413G9 Lonicera japonica HOM05D000104 ORTHO05D004363 1.2e-26 123.6 76 84.2
Sed0011777 Sechium edule HOM05D000104 ORTHO05D004363 1.2e-26 123.6 84 78.6
CAN.G195.21 Capsicum annuum HOM05D000104 ORTHO05D004363 1.5e-26 123.2 76 82.9
Solyc08g074500.2 Solanum lycopersicum HOM05D000104 ORTHO05D004363 1.5e-26 123.2 76 84.2
Sopen08g023150 Solanum pennellii HOM05D000104 ORTHO05D004363 1.5e-26 123.2 76 84.2
Duzib177G0255 Durio zibethinus HOM05D000104 ORTHO05D004363 2.0e-26 122.9 84 77.4
PGSC0003DMG400029599 Solanum tuberosum HOM05D000104 ORTHO05D004363 2.0e-26 122.9 70 90.0
ECA240G3782 Erigeron canadensis HOM05D000104 ORTHO05D004363 2.6e-26 122.5 84 78.6
HanXRQChr03g0082351 Helianthus annuus HOM05D000104 ORTHO05D004363 2.6e-26 122.5 80 80.0
Thecc.05G236400 Theobroma cacao HOM05D000104 ORTHO05D004363 2.6e-26 122.5 84 77.4
GSVIVG01019359001 Vitis vinifera HOM05D000104 ORTHO05D004363 2.6e-26 122.5 84 76.2
ClCG05G011380 Citrullus lanatus HOM05D000104 ORTHO05D004363 3.4e-26 122.1 81 81.5
Potri.013G068400 Populus trichocarpa HOM05D000104 ORTHO05D004363 3.4e-26 122.1 84 76.2
CSS0023365 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D004363 4.5e-26 121.7 76 82.9
Nitab4.5_0002482g0020 Nicotiana tabacum HOM05D000104 ORTHO05D004363 4.5e-26 121.7 70 88.6
Peaxi162Scf00213g01724 Petunia axillaris HOM05D000104 ORTHO05D004363 4.5e-26 121.7 70 88.6
Aqoxy7G00075 Aquilegia oxysepala HOM05D000104 ORTHO05D004363 5.8e-26 121.3 84 77.4
Sabra13G0059700 Salix brachista HOM05D000104 ORTHO05D004363 5.8e-26 121.3 84 75.0
unitig_92.g28134 Utricularia gibba HOM05D000104 ORTHO05D004363 5.8e-26 121.3 79 79.7
Cfa017683 Carpinus fangiana HOM05D000104 ORTHO05D004363 7.6e-26 120.9 82 80.5
Hma1.2p1_0268F.1_g107650 Hydrangea macrophylla HOM05D000104 ORTHO05D004363 7.6e-26 120.9 83 77.1
Hund23685 Selenicereus undatus HOM05D000104 ORTHO05D004363 7.6e-26 120.9 82 78.0
Ah.14g089210 Amaranthus hybridus HOM05D000104 ORTHO05D004363 9.9e-26 120.6 82 78.0
Haze_20464 Corylus avellana HOM05D000104 ORTHO05D004363 9.9e-26 120.6 67 94.0
Duzib128G0660 Durio zibethinus HOM05D000104 ORTHO05D004363 9.9e-26 120.6 84 73.8
Sc05g0007890 Simmondsia chinensis HOM05D000104 ORTHO05D004363 9.9e-26 120.6 85 74.1
arahy.Tifrunner.gnm1.ann1.64GWQS Arachis hypogaea HOM05D000104 ORTHO05D004363 1.3e-25 120.2 94 72.3
AUR62014777 Chenopodium quinoa HOM05D000104 ORTHO05D004363 1.3e-25 120.2 82 76.8
AUR62016963 Chenopodium quinoa HOM05D000104 ORTHO05D004363 1.3e-25 120.2 82 76.8
Glyma.09G234400 Glycine max HOM05D000104 ORTHO05D004363 1.3e-25 120.2 94 70.2
Glyma.12G002300 Glycine max HOM05D000104 ORTHO05D004363 1.3e-25 120.2 94 70.2
TAR362G0053 Trochodendron aralioides HOM05D000104 ORTHO05D004363 1.3e-25 120.2 81 80.2
Lsat_1_v5_gn_5_59321 Lactuca sativa HOM05D000104 ORTHO05D004363 1.7e-25 119.8 67 92.5
Lalb_Chr01g0000141 Lupinus albus HOM05D000104 ORTHO05D004363 1.7e-25 119.8 83 78.3
Medtr4g035100 Medicago truncatula HOM05D000104 ORTHO05D004363 1.7e-25 119.8 82 76.8
Phvul.011G002900 Phaseolus vulgaris HOM05D000104 ORTHO05D004363 1.7e-25 119.8 84 75.0
Cc11_g04400 Coffea canephora HOM05D000104 ORTHO05D004363 2.2e-25 119.4 74 85.1
Lj3g0018732 Lotus japonicus HOM05D000104 ORTHO05D004363 2.2e-25 119.4 94 69.1
Nn3g17003 Nelumbo nucifera HOM05D000104 ORTHO05D004363 2.2e-25 119.4 84 75.0
PSO832G0838 Papaver somniferum HOM05D000104 ORTHO05D004363 2.2e-25 119.4 80 80.0
Atru.chr2.1616 Acer truncatum HOM05D000104 ORTHO05D004363 2.9e-25 119.0 92 69.6
Manes.08G155800 Manihot esculenta HOM05D000104 ORTHO05D004363 2.9e-25 119.0 84 73.8
VMungo1127G2256 Vigna mungo HOM05D000104 ORTHO05D004363 2.9e-25 119.0 84 75.0
Gohir.D13G165000 Gossypium hirsutum HOM05D000104 ORTHO05D004363 3.8e-25 118.6 84 73.8
Gorai.013G197700 Gossypium raimondii HOM05D000104 ORTHO05D004363 3.8e-25 118.6 84 73.8
Zm00001eb297280 Zea mays HOM05D000104 ORTHO05D004363 3.8e-25 118.6 83 78.3
COL.COLO4_33474 Corchorus olitorius HOM05D000104 ORTHO05D004363 4.9e-25 118.2 84 72.6
TWI32G0549 Tripterygium wilfordii HOM05D000104 ORTHO05D004363 6.4e-25 117.9 70 87.1
ATR0665G650 Amborella trichopoda HOM05D000104 ORTHO05D004363 8.4e-25 117.5 81 75.3
CDE06G0100 Ceratophyllum demersum HOM05D000104 ORTHO05D004363 8.4e-25 117.5 83 77.1
Prupe.6G000100 Prunus persica HOM05D000104 ORTHO05D004363 8.4e-25 117.5 76 78.9
CiPaw.09G169600 Carya illinoinensis HOM05D000104 ORTHO05D004363 1.1e-24 117.1 67 89.6
Ca_19676_v3 Cicer arietinum L. HOM05D000104 ORTHO05D004363 1.1e-24 117.1 94 69.1
FAN16G0934 Fragaria x ananassa HOM05D000104 ORTHO05D004363 1.1e-24 117.1 84 72.6
FAN21G1945 Fragaria x ananassa HOM05D000104 ORTHO05D004363 1.1e-24 117.1 84 72.6
THA.LOC104819143 Tarenaya hassleriana HOM05D000104 ORTHO05D004363 1.1e-24 117.1 92 66.3
TPR.G31923 Trifolium pratense HOM05D000104 ORTHO05D004363 1.1e-24 117.1 83 75.9
AT3G54280 Arabidopsis thaliana HOM05D000104 ORTHO05D004363 1.4e-24 116.7 84 73.8
MD03G1000900 Malus domestica HOM05D000104 ORTHO05D004363 1.4e-24 116.7 94 68.1
Psat7g148080 Pisum sativum HOM05D000104 ORTHO05D004363 1.4e-24 116.7 83 75.9
Aa31sc392G40 Aethionema arabicum HOM05D000104 ORTHO05D004363 1.9e-24 116.3 93 68.8
A09p47280 Brassica napus HOM05D000104 ORTHO05D004363 1.9e-24 116.3 84 72.6
BraA09t40189Z Brassica rapa HOM05D000104 ORTHO05D004363 1.9e-24 116.3 84 72.6
Carub.0005s2087 Capsella rubella HOM05D000104 ORTHO05D004363 1.9e-24 116.3 84 72.6
CARHR164210 Cardamine hirsuta HOM05D000104 ORTHO05D004363 1.9e-24 116.3 84 72.6
Cpa.g.c36764 Carica papaya HOM05D000104 ORTHO05D004363 1.9e-24 116.3 81 74.1
Cpa.g.sc73.35 Carica papaya HOM05D000104 ORTHO05D004363 1.9e-24 116.3 81 74.1
Thhalv10010052m.g Eutrema salsugineum HOM05D000104 ORTHO05D004363 1.9e-24 116.3 84 72.6
FAN11G1590 Fragaria x ananassa HOM05D000104 ORTHO05D004363 1.9e-24 116.3 84 72.6
PGR083G0814 Punica granatum HOM05D000104 ORTHO05D004363 1.9e-24 116.3 94 67.0
RcHm_v2.0_Chr5g0084181 Rosa chinensis HOM05D000104 ORTHO05D004363 2.4e-24 115.9 84 72.6
SEGI_14274 Sequoiadendron giganteum HOM05D000104 ORTHO05D004363 2.4e-24 115.9 76 80.3
FvH4_3g46101 Fragaria vesca HOM05D000104 ORTHO05D004363 3.2e-24 115.5 84 72.6
QL09p044755 Quercus lobata HOM05D000104 ORTHO05D004363 3.2e-24 115.5 67 88.1
BcaC02g09076 Brassica carinata HOM05D000104 ORTHO05D004363 4.2e-24 115.2 84 72.6
C08p29510 Brassica napus HOM05D000104 ORTHO05D004363 4.2e-24 115.2 84 71.4
BolC8t50557H Brassica oleracea HOM05D000104 ORTHO05D004363 4.2e-24 115.2 84 71.4
FAN25G2034 Fragaria x ananassa HOM05D000104 ORTHO05D004363 4.2e-24 115.2 84 71.4
HPP92_015726 Vanilla planifolia HOM05D000104 ORTHO05D004363 4.2e-24 115.2 84 72.6
Actinidia03314 Actinidia chinensis HOM05D000104 ORTHO05D004363 5.5e-24 114.8 76 77.6
AL5G35320 Arabidopsis lyrata HOM05D000104 ORTHO05D004363 5.5e-24 114.8 84 72.6
Sp5g08110 Schrenkiella parvula HOM05D000104 ORTHO05D004363 5.5e-24 114.8 80 75.0
Ciclev10030472m.g Citrus clementina HOM05D000104 ORTHO05D004363 1.3e-22 110.2 92 65.2
BcaB02g08482 Brassica carinata HOM05D000104 ORTHO05D004363 2.3e-22 109.4 92 63.0
Pp3c3_11220 Physcomitrium patens HOM05D000104 ORTHO05D004363 3.9e-22 108.6 64 82.8
ATR0559G182 Amborella trichopoda HOM05D000104 ORTHO05D004363 8.7e-22 107.5 70 80.0
SMO223G0022 Selaginella moellendorffii HOM05D000104 ORTHO05D004363 8.7e-22 107.5 78 70.5
CBR_g57043 Chara braunii HOM05D000104 ORTHO05D004363 1.5e-21 106.7 81 67.9
Mapoly0038s0059 Marchantia polymorpha HOM05D000104 ORTHO05D004363 3.3e-21 105.5 78 71.8
AagrBONN_evm.TU.Sc2ySwM_228.1549 Anthoceros agrestis HOM05D000104 ORTHO05D004363 3.4e-18 95.5 68 75.0
AagrBONN_evm.TU.Sc2ySwM_228.4037 Anthoceros agrestis HOM05D000104 ORTHO05D004363 3.4e-18 95.5 68 75.0
MCO02G056 Micromonas commoda HOM05D000104 ORTHO05D004363 4.9e-17 91.7 70 61.4
Cre16.g687301 Chlamydomonas reinhardtii HOM05D000104 ORTHO05D004363 2.7e-15 85.9 63 65.1
PRCOL_00001942 Prasinoderma coloniale HOM05D000104 ORTHO05D004363 3.5e-15 85.5 64 64.1
Actinidia25722 Actinidia chinensis HOM05D000104 ORTHO05D004363 2.2e-09 66.2 47 72.3
Dinv09126 Davidia involucrata HOM05D006885 ORTHO05D008606 6.5e-09 64.7 35 91.4
Haze_26680 Corylus avellana HOM05D000104 ORTHO05D165563 6.7e-06 54.7 64 46.9


User provided reference genes

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