Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold18G08517 Striga asiatica HOM05D004933 ORTHO05D005465 1.7e-163 579.3 303 100.0
SGA_v2.0_scaffold44G16628 Striga asiatica HOM05D004933 ORTHO05D005465 1.4e-109 400.2 285 80.4
Migut.F00567 Erythranthe guttata HOM05D004933 ORTHO05D005465 1.0e-83 314.3 290 63.8
Oeu064000.1 Olea europaea HOM05D004933 ORTHO05D005465 7.8e-76 288.1 294 58.5
Hma1.2p1_1805F.1_g303160 Hydrangea macrophylla HOM05D004933 ORTHO05D005465 3.1e-72 276.2 296 56.8
Hma1.2p1_1805F.1_g303170 Hydrangea macrophylla HOM05D004933 ORTHO05D005465 3.1e-72 276.2 296 56.8
Lj8C53G7 Lonicera japonica HOM05D004933 ORTHO05D005465 6.8e-72 275.0 296 56.4
HanXRQChr14g0460551 Helianthus annuus HOM05D004933 ORTHO05D005465 5.8e-71 271.9 295 56.3
Dinv21856 Davidia involucrata HOM05D004933 ORTHO05D005465 3.7e-70 269.2 299 54.8
Actinidia13639 Actinidia chinensis HOM05D004933 ORTHO05D005465 6.4e-70 268.5 296 55.1
unitig_0.g1674 Utricularia gibba HOM05D004933 ORTHO05D005465 1.9e-69 266.9 290 54.8
vmacro06901 Vaccinium macrocarpon HOM05D004933 ORTHO05D005465 4.1e-69 265.8 296 54.7
Rhsim03G0153500 Rhododendron simsii HOM05D004933 ORTHO05D005465 7.8e-68 261.5 297 54.2
CSS0031284 Camellia sinensis var. sinensis HOM05D004933 ORTHO05D005465 1.3e-67 260.8 289 55.0
DCAR_014660 Daucus carota HOM05D004933 ORTHO05D005465 3.2e-61 239.6 291 52.9
Lsat_1_v5_gn_2_126780 Lactuca sativa HOM05D004933 ORTHO05D005465 4.1e-61 239.2 298 50.7
Cc02_g05220 Coffea canephora HOM05D004933 ORTHO05D005465 2.3e-59 233.4 294 50.3
ECA238G2994 Erigeron canadensis HOM05D004933 ORTHO05D005465 8.7e-59 231.5 298 49.0
Sopen03g025610 Solanum pennellii HOM05D004933 ORTHO05D005465 8.7e-59 231.5 306 50.7
Solyc03g095680.2 Solanum lycopersicum HOM05D004933 ORTHO05D005465 1.1e-58 231.1 306 50.7
Peaxi162Scf00073g02333 Petunia axillaris HOM05D004933 ORTHO05D005465 1.2e-57 227.6 311 48.6
GSVIVG01032657001 Vitis vinifera HOM05D004933 ORTHO05D005465 8.1e-57 224.9 296 49.0
Manes.10G003100 Manihot esculenta HOM05D004933 ORTHO05D005465 1.1e-56 224.6 291 46.7
MELO3C020016.2 Cucumis melo HOM05D004933 ORTHO05D005465 4.0e-56 222.6 292 46.9
TWI09G0099 Tripterygium wilfordii HOM05D004933 ORTHO05D005465 4.0e-56 222.6 293 46.1
CAN.G1229.10 Capsicum annuum HOM05D004933 ORTHO05D005465 5.2e-56 222.2 306 48.4
ClCG11G005620 Citrullus lanatus HOM05D004933 ORTHO05D005465 2.0e-55 220.3 292 46.9
Nitab4.5_0006356g0010 Nicotiana tabacum HOM05D004933 ORTHO05D005465 2.2e-54 216.9 322 46.3
CANSAT56G0526 Cannabis sativa HOM05D004933 ORTHO05D005465 2.9e-54 216.5 294 46.9
TAR623G0849 Trochodendron aralioides HOM05D004933 ORTHO05D005465 1.1e-53 214.5 298 48.3
Atru.chr12.195 Acer truncatum HOM05D004933 ORTHO05D005465 1.4e-53 214.2 294 46.6
Sc11g0006050 Simmondsia chinensis HOM05D004933 ORTHO05D005465 2.4e-53 213.4 294 48.0
Thecc.10G184900 Theobroma cacao HOM05D004933 ORTHO05D005465 2.4e-53 213.4 297 47.1
Potri.019G060900 Populus trichocarpa HOM05D004933 ORTHO05D005465 5.4e-53 212.2 293 44.4
CsaV3_6G002390 Cucumis sativus L. HOM05D004933 ORTHO05D005465 2.1e-52 210.3 293 46.4
PGR044G2398 Punica granatum HOM05D004933 ORTHO05D005465 2.7e-52 209.9 306 45.4
MBI15_g39394_MAGBIO Magnolia biondii HOM05D004933 ORTHO05D005465 4.6e-52 209.1 296 47.3
Gorai.011G206500 Gossypium raimondii HOM05D004933 ORTHO05D005465 7.8e-52 208.4 292 45.2
Gohir.A10G177700 Gossypium hirsutum HOM05D004933 ORTHO05D005465 1.0e-51 208.0 292 45.9
Gohir.D10G184300 Gossypium hirsutum HOM05D004933 ORTHO05D005465 1.0e-51 208.0 292 45.9
Cfa001196 Carpinus fangiana HOM05D004933 ORTHO05D005465 1.7e-51 207.2 297 46.8
Ciclev10030489m.g Citrus clementina HOM05D004933 ORTHO05D005465 1.7e-51 207.2 297 45.5
Sed0014960 Sechium edule HOM05D004933 ORTHO05D005465 1.7e-51 207.2 298 45.6
Haze_17369 Corylus avellana HOM05D004933 ORTHO05D005465 2.3e-51 206.8 297 44.8
EL10Ac2g02668 Beta vulgaris HOM05D004933 ORTHO05D005465 3.0e-51 206.5 287 45.3
Eucgr.J00103 Eucalyptus grandis HOM05D004933 ORTHO05D005465 6.6e-51 205.3 287 47.0
Cpa.g.sc19.41 Carica papaya HOM05D004933 ORTHO05D005465 8.7e-51 204.9 292 45.2
Nn2g10269 Nelumbo nucifera HOM05D004933 ORTHO05D005465 2.5e-50 203.4 297 48.5
Ah.12g064450 Amaranthus hybridus HOM05D004933 ORTHO05D005465 2.8e-49 199.9 286 44.8
Medtr5g067980 Medicago truncatula HOM05D004933 ORTHO05D005465 3.6e-49 199.5 292 45.2
AUR62030592 Chenopodium quinoa HOM05D004933 ORTHO05D005465 6.2e-49 198.7 288 44.8
LjContig00408g0012805 Lotus japonicus HOM05D004933 ORTHO05D005465 6.2e-49 198.7 292 44.2
Hund13438 Selenicereus undatus HOM05D004933 ORTHO05D005465 1.4e-48 197.6 288 45.1
arahy.Tifrunner.gnm1.ann1.561PLB Arachis hypogaea HOM05D004933 ORTHO05D005465 1.8e-48 197.2 299 43.5
arahy.Tifrunner.gnm1.ann1.LX8ZS6 Arachis hypogaea HOM05D004933 ORTHO05D005465 1.8e-48 197.2 299 43.5
Glyma.02G219200 Glycine max HOM05D004933 ORTHO05D005465 2.4e-48 196.8 292 43.8
Duzib106G0698 Durio zibethinus HOM05D004933 ORTHO05D005465 3.1e-48 196.4 296 43.6
Lalb_Chr17g0344711 Lupinus albus HOM05D004933 ORTHO05D005465 4.0e-48 196.1 293 43.0
Phvul.008G186300 Phaseolus vulgaris HOM05D004933 ORTHO05D005465 5.3e-48 195.7 293 44.0
Thhalv10016132m.g Eutrema salsugineum HOM05D004933 ORTHO05D005465 2.6e-47 193.4 296 43.6
Prupe.2G265500 Prunus persica HOM05D004933 ORTHO05D005465 3.4e-47 193.0 291 44.3
QL08p065069 Quercus lobata HOM05D004933 ORTHO05D005465 3.4e-47 193.0 281 45.2
Sabra19G0074700 Salix brachista HOM05D004933 ORTHO05D005465 9.9e-47 191.4 313 40.3
AUR62024946 Chenopodium quinoa HOM05D004933 ORTHO05D005465 1.7e-46 190.7 288 43.8
MD01G1169300 Malus domestica HOM05D004933 ORTHO05D005465 2.2e-46 190.3 295 46.1
FvH4_7g26110 Fragaria vesca HOM05D004933 ORTHO05D005465 2.9e-46 189.9 296 43.2
RcHm_v2.0_Chr1g0372551 Rosa chinensis HOM05D004933 ORTHO05D005465 6.4e-46 188.7 296 42.9
THA.LOC104824249 Tarenaya hassleriana HOM05D004933 ORTHO05D005465 6.4e-46 188.7 294 42.5
Carub.0004s2307 Capsella rubella HOM05D004933 ORTHO05D005465 2.4e-45 186.8 294 42.2
Psat2g061800 Pisum sativum HOM05D004933 ORTHO05D005465 2.4e-45 186.8 292 42.8
Aa31LG3G1370 Aethionema arabicum HOM05D004933 ORTHO05D005465 3.2e-45 186.4 304 42.1
Sp4g23090 Schrenkiella parvula HOM05D004933 ORTHO05D005465 3.2e-45 186.4 295 43.1
TPR.G33913 Trifolium pratense HOM05D004933 ORTHO05D005465 5.4e-45 185.7 293 41.6
AL4G38660 Arabidopsis lyrata HOM05D004933 ORTHO05D005465 7.1e-45 185.3 305 42.0
ATR1127G041 Amborella trichopoda HOM05D004933 ORTHO05D005465 9.3e-45 184.9 304 43.8
FAN06G3663 Fragaria x ananassa HOM05D004933 ORTHO05D005465 3.5e-44 183.0 295 43.1
Glyma.14G186500 Glycine max HOM05D004933 ORTHO05D005465 1.3e-43 181.0 292 41.8
BraA04t18570Z Brassica rapa HOM05D004933 ORTHO05D005465 1.8e-43 180.6 293 42.7
PSO017G2233 Papaver somniferum HOM05D004933 ORTHO05D005465 3.0e-43 179.9 296 42.2
BolC4t28354H Brassica oleracea HOM05D004933 ORTHO05D005465 6.7e-43 178.7 293 42.0
C04p68550 Brassica napus HOM05D004933 ORTHO05D005465 8.7e-43 178.3 293 42.3
Ca_05521_v3 Cicer arietinum L. HOM05D004933 ORTHO05D005465 1.1e-42 177.9 299 41.1
AT2G40770 Arabidopsis thaliana HOM05D004933 ORTHO05D005465 1.9e-42 177.2 305 40.7
A04p31150 Brassica napus HOM05D004933 ORTHO05D005465 2.5e-42 176.8 293 41.3
CiPaw.01G307300 Carya illinoinensis HOM05D004933 ORTHO05D005465 3.3e-42 176.4 237 46.8
PSO170G4230 Papaver somniferum HOM05D004933 ORTHO05D005465 7.4e-42 175.3 296 41.2
FAN10G2846 Fragaria x ananassa HOM05D004933 ORTHO05D005465 1.6e-41 174.1 239 46.4
CARHR135870 Cardamine hirsuta HOM05D004933 ORTHO05D005465 1.5e-39 167.5 290 42.1
VMungo0647G0811 Vigna mungo HOM05D004933 ORTHO05D005465 4.9e-38 162.5 237 44.3
Aqoxy4G03277 Aquilegia oxysepala HOM05D004933 ORTHO05D005465 2.4e-37 160.2 302 39.1
Zm00001eb330720 Zea mays HOM05D004933 ORTHO05D005465 1.3e-35 154.5 296 39.2
HPP92_012544 Vanilla planifolia HOM05D004933 ORTHO05D005465 2.3e-35 153.7 306 38.2
BcaC02g12883 Brassica carinata HOM05D004933 ORTHO05D005465 2.9e-30 136.7 264 38.6
Hma1.2p1_0264F.1_g105960 Hydrangea macrophylla HOM05D004933 ORTHO05D005465 6.9e-24 115.5 117 54.7
Pp3c18_13500 Physcomitrium patens HOM05D004933 ORTHO05D005465 5.5e-21 105.9 297 30.6
CDE04G3532 Ceratophyllum demersum HOM05D004933 ORTHO05D005465 3.3e-18 96.7 112 54.5
AagrBONN_evm.TU.Sc2ySwM_344.3336 Anthoceros agrestis HOM05D004933 ORTHO05D005465 7.4e-18 95.5 293 31.4
SMO361G0687 Selaginella moellendorffii HOM05D004933 ORTHO05D005465 1.2e-15 88.2 232 31.0
QL08p037214 Quercus lobata HOM05D002263 ORTHO05D005465 1.1e-10 71.6 84 48.8
SMO361G0667 Selaginella moellendorffii HOM05D016509 ORTHO05D005465 5.7e-10 69.3 277 26.4
SEGI_41607 Sequoiadendron giganteum HOM05D004933 ORTHO05D005465 2.4e-08 63.9 117 35.0
MD07G1235300 Malus domestica HOM05D004933 ORTHO05D005465 1.3e-06 58.2 47 57.4
QL08p003465 Quercus lobata HOM05D002263 ORTHO05D012916 6.5e-06 55.8 73 43.8


User provided reference genes

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