Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold166G38344 Striga asiatica HOM05D006873 ORTHO05D008668 9.5e-226 786.6 413 100.0
MSTRG.7876 Avicennia marina HOM05D006873 ORTHO05D008668 1.1e-107 394.4 430 53.5
SalBow2G2439 Salvia bowleyana HOM05D006873 ORTHO05D008668 5.1e-94 349.0 436 50.2
SalBow2G2215 Salvia bowleyana HOM05D006873 ORTHO05D008668 1.9e-93 347.1 431 51.0
Migut.L01442 Erythranthe guttata HOM05D006873 ORTHO05D008668 4.8e-84 315.8 508 46.7
PGSC0003DMG400015575 Solanum tuberosum HOM05D006873 ORTHO05D008668 4.6e-71 272.7 432 43.1
unitig_26.g10334 Utricularia gibba HOM05D006873 ORTHO05D008668 3.0e-70 270.0 410 44.9
CSS0023446 Camellia sinensis var. sinensis HOM05D006873 ORTHO05D008668 3.9e-70 269.6 450 38.9
CSS0006883 Camellia sinensis var. sinensis HOM05D006873 ORTHO05D008668 1.5e-69 267.7 449 39.2
Nitab4.5_0009368g0020 Nicotiana tabacum HOM05D006873 ORTHO05D008668 2.0e-66 257.3 448 41.5
Solyc05g006070.4 Solanum lycopersicum HOM05D006873 ORTHO05D008668 3.4e-66 256.5 425 40.5
Sopen05g002090 Solanum pennellii HOM05D006873 ORTHO05D008668 8.4e-65 251.9 430 40.9
Peaxi162Scf00421g00062 Petunia axillaris HOM05D006873 ORTHO05D008668 2.3e-62 243.8 440 39.5
Nitab4.5_0000257g0240 Nicotiana tabacum HOM05D006873 ORTHO05D008668 5.1e-62 242.7 446 40.1
Manes.05G090700 Manihot esculenta HOM05D006873 ORTHO05D008668 8.7e-62 241.9 354 42.1
Cc11_g14280 Coffea canephora HOM05D006873 ORTHO05D008668 3.3e-61 240.0 304 47.0
Thecc.02G242900 Theobroma cacao HOM05D006873 ORTHO05D008668 1.3e-60 238.0 382 42.1
Nn3g16974 Nelumbo nucifera HOM05D006873 ORTHO05D008668 2.8e-60 236.9 328 43.6
Gorai.004G149100 Gossypium raimondii HOM05D006873 ORTHO05D008668 4.8e-60 236.1 284 50.0
COL.COLO4_37899 Corchorus olitorius HOM05D006873 ORTHO05D008668 8.2e-60 235.3 210 59.0
Gohir.A08G123000 Gossypium hirsutum HOM05D006873 ORTHO05D008668 1.1e-59 235.0 430 39.8
Phvul.002G074900 Phaseolus vulgaris HOM05D006873 ORTHO05D008668 3.1e-59 233.4 437 38.4
CiPaw.06G074700 Carya illinoinensis HOM05D006873 ORTHO05D008668 6.9e-59 232.3 397 38.3
Ciclev10031560m.g Citrus clementina HOM05D006873 ORTHO05D008668 9.0e-59 231.9 423 38.8
Gohir.D08G144400 Gossypium hirsutum HOM05D006873 ORTHO05D008668 1.2e-58 231.5 233 54.9
Actinidia15007 Actinidia chinensis HOM05D006873 ORTHO05D008668 2.6e-58 230.3 438 38.4
Atru.chr11.1966 Acer truncatum HOM05D006873 ORTHO05D008668 5.9e-58 229.2 437 36.6
VMungo1215G0960 Vigna mungo HOM05D006873 ORTHO05D008668 1.7e-57 227.6 434 38.7
Potri.008G146700 Populus trichocarpa HOM05D006873 ORTHO05D008668 2.2e-57 227.3 368 39.9
PGR119G2095 Punica granatum HOM05D006873 ORTHO05D008668 2.2e-57 227.3 425 39.8
DCAR_026551 Daucus carota HOM05D006873 ORTHO05D008668 3.8e-57 226.5 409 37.4
ECA234G0329 Erigeron canadensis HOM05D000967 ORTHO05D000796 1.4e-56 224.6 311 42.8
Lj2g0015184 Lotus japonicus HOM05D006873 ORTHO05D008668 1.4e-56 224.6 326 42.9
Cpa.g.sc5.353 Carica papaya HOM05D006873 ORTHO05D008668 2.5e-56 223.8 428 37.9
TPR.G13500 Trifolium pratense HOM05D006873 ORTHO05D008668 7.2e-56 222.2 318 42.1
Sc11g0001350 Simmondsia chinensis HOM05D006873 ORTHO05D008668 9.3e-56 221.9 316 43.7
Lsat_1_v5_gn_8_160241 Lactuca sativa HOM05D006873 ORTHO05D008668 1.3e-54 218.0 338 42.6
Medtr5g035330 Medicago truncatula HOM05D006873 ORTHO05D008668 1.8e-54 217.6 351 41.0
Glyma.02G030100 Glycine max HOM05D006873 ORTHO05D008668 2.3e-54 217.2 331 42.0
Duzib248G0774 Durio zibethinus HOM05D006873 ORTHO05D008668 3.9e-54 216.5 384 38.3
Hund25317 Selenicereus undatus HOM05D006873 ORTHO05D008668 1.1e-53 214.9 309 42.4
PSO063G4822 Papaver somniferum HOM05D006873 ORTHO05D008668 5.7e-53 212.6 432 34.5
HanXRQChr08g0209031 Helianthus annuus HOM05D006873 ORTHO05D008668 1.6e-52 211.1 313 42.2
Cfa009104 Carpinus fangiana HOM05D006873 ORTHO05D008668 3.7e-52 209.9 343 39.9
Haze_12141 Corylus avellana HOM05D006873 ORTHO05D008668 6.3e-52 209.1 401 37.9
CANSAT01G2194 Cannabis sativa HOM05D006873 ORTHO05D008668 8.2e-52 208.8 448 34.6
vmacro16278 Vaccinium macrocarpon HOM05D006873 ORTHO05D008668 8.2e-52 208.8 397 34.3
Glyma.01G035700 Glycine max HOM05D006873 ORTHO05D008668 1.8e-51 207.6 332 41.6
MELO3C002912.2 Cucumis melo HOM05D006873 ORTHO05D008668 4.1e-51 206.5 407 37.6
THA.LOC104823082 Tarenaya hassleriana HOM05D006873 ORTHO05D008668 4.1e-51 206.5 454 35.5
PSO832G2329 Papaver somniferum HOM05D006873 ORTHO05D008668 5.3e-51 206.1 410 34.4
Sabra08G0111700 Salix brachista HOM05D006873 ORTHO05D008668 5.3e-51 206.1 327 39.1
TAR622G0254 Trochodendron aralioides HOM05D006873 ORTHO05D008668 6.9e-51 205.7 332 39.8
Ca_04627_v3 Cicer arietinum L. HOM05D006873 ORTHO05D008668 1.2e-50 204.9 358 43.0
CDE07G1306 Ceratophyllum demersum HOM05D005206 ORTHO05D006219 1.7e-49 201.1 329 40.4
TWI18G0196 Tripterygium wilfordii HOM05D006873 ORTHO05D008668 1.7e-49 201.1 418 38.3
GSVIVG01020168001 Vitis vinifera HOM05D006873 ORTHO05D008668 1.7e-49 201.1 196 52.0
Rhsim12G0124200 Rhododendron simsii HOM05D006873 ORTHO05D008668 2.9e-49 200.3 413 33.7
ClCG09G020710 Citrullus lanatus HOM05D006873 ORTHO05D008668 6.5e-49 199.1 390 36.9
AUR62020959 Chenopodium quinoa HOM05D006873 ORTHO05D008668 1.4e-48 198.0 316 40.5
Aqoxy3G03077 Aquilegia oxysepala HOM05D006873 ORTHO05D008668 2.5e-48 197.2 379 36.7
arahy.Tifrunner.gnm1.ann1.MXA56B Arachis hypogaea HOM05D006873 ORTHO05D008668 3.2e-48 196.8 394 34.8
Lalb_Chr05g0217211 Lupinus albus HOM05D006873 ORTHO05D008668 4.2e-48 196.4 352 36.6
arahy.Tifrunner.gnm1.ann1.8WMT1Z Arachis hypogaea HOM05D006873 ORTHO05D008668 5.5e-48 196.1 249 46.6
arahy.Tifrunner.gnm1.ann1.RPT3RX Arachis hypogaea HOM05D006873 ORTHO05D009096 9.4e-48 195.3 175 55.4
QL03p062447 Quercus lobata HOM05D006873 ORTHO05D008668 9.4e-48 195.3 220 47.7
Prupe.1G259500 Prunus persica HOM05D006873 ORTHO05D008668 1.6e-47 194.5 496 33.3
EL10Ac6g13256 Beta vulgaris HOM05D006873 ORTHO05D008668 2.7e-47 193.7 373 37.5
Eucgr.B02558 Eucalyptus grandis HOM05D006873 ORTHO05D008668 2.7e-47 193.7 440 36.1
Carub.0002s1690 Capsella rubella HOM05D006873 ORTHO05D008668 2.3e-46 190.7 267 41.2
AL2G29500 Arabidopsis lyrata HOM05D006873 ORTHO05D008668 3.0e-46 190.3 428 33.4
FvH4_4g34980 Fragaria vesca HOM05D006873 ORTHO05D008668 3.9e-46 189.9 266 43.2
arahy.Tifrunner.gnm1.ann1.N2BTYN Arachis hypogaea HOM05D006873 ORTHO05D008668 5.1e-46 189.5 189 52.4
Thhalv10018395m.g Eutrema salsugineum HOM05D006873 ORTHO05D008668 5.1e-46 189.5 409 34.5
FAN22G1812 Fragaria x ananassa HOM05D006873 ORTHO05D008668 1.5e-45 188.0 347 38.9
ATR1149G030 Amborella trichopoda HOM05D006873 ORTHO05D008668 3.3e-45 186.8 328 39.3
BcaB03g15534 Brassica carinata HOM05D006873 ORTHO05D008668 3.3e-45 186.8 214 45.8
Aa31LG4G10700 Aethionema arabicum HOM05D006873 ORTHO05D008668 4.4e-45 186.4 226 46.5
Dinv31000 Davidia involucrata HOM05D006873 ORTHO05D008668 4.4e-45 186.4 324 40.4
Dinv31103 Davidia involucrata HOM05D006873 ORTHO05D008668 4.4e-45 186.4 324 40.4
Sed0022830 Sechium edule HOM05D006873 ORTHO05D008668 5.7e-45 186.0 396 35.4
A07p31180 Brassica napus HOM05D006873 ORTHO05D008668 2.2e-44 184.1 311 37.3
BraA07t30751Z Brassica rapa HOM05D006873 ORTHO05D008668 2.2e-44 184.1 311 37.3
AT1G70200 Arabidopsis thaliana HOM05D006873 ORTHO05D008668 3.7e-44 183.3 428 31.8
BcaC08g45836 Brassica carinata HOM05D006873 ORTHO05D008668 3.7e-44 183.3 182 49.5
C06p36230 Brassica napus HOM05D006873 ORTHO05D008668 4.8e-44 183.0 183 48.6
Sp5g25330 Schrenkiella parvula HOM05D006873 ORTHO05D008668 4.8e-44 183.0 415 34.2
RcHm_v2.0_Chr4g0444501 Rosa chinensis HOM05D006873 ORTHO05D008668 1.4e-43 181.4 276 40.9
CARHR063320 Cardamine hirsuta HOM05D006873 ORTHO05D008668 1.8e-43 181.0 407 32.7
FAN07G2203 Fragaria x ananassa HOM05D006873 ORTHO05D008668 4.1e-43 179.9 536 31.0
BolC6t38744H Brassica oleracea HOM05D006873 ORTHO05D008668 5.3e-43 179.5 182 48.9
FAN17G1454 Fragaria x ananassa HOM05D006873 ORTHO05D008668 2.0e-42 177.6 262 42.4
MD16G1087500 Malus domestica HOM05D006873 ORTHO05D008668 4.5e-42 176.4 258 40.3
Oeu001659.1 Olea europaea HOM05D006873 ORTHO05D008668 7.7e-42 175.6 246 45.1
HPP92_005898 Vanilla planifolia HOM05D006873 ORTHO05D008668 7.7e-42 175.6 320 37.5
Ah.04g149970 Amaranthus hybridus HOM05D006873 ORTHO05D008668 9.4e-40 168.7 334 36.8
CDE04G1917 Ceratophyllum demersum HOM05D000231 ORTHO05D008668 1.3e-36 158.3 293 39.2
Psat2g111440 Pisum sativum HOM05D006873 ORTHO05D008668 2.8e-36 157.1 273 40.3
SEGI_33585 Sequoiadendron giganteum HOM05D006873 ORTHO05D008668 9.1e-35 152.1 163 46.6
Mapoly0001s0497 Marchantia polymorpha HOM05D006873 ORTHO05D008668 1.5e-32 144.8 195 40.5
AagrBONN_evm.TU.Sc2ySwM_362.2365 Anthoceros agrestis HOM05D006873 ORTHO05D008668 1.6e-31 141.4 160 42.5
MBI15_g12637_MAGBIO Magnolia biondii HOM05D006873 ORTHO05D008668 1.0e-30 138.7 263 35.7
CBR_g81555 Chara braunii HOM05D006873 ORTHO05D000353 4.0e-30 136.7 207 39.1
CsaV3_5G025700 Cucumis sativus L. HOM05D006873 ORTHO05D008668 1.3e-28 131.7 241 37.3
Pp3c1_41900 Physcomitrium patens HOM05D006873 ORTHO05D008668 2.2e-28 131.0 206 36.4
Os02g0326200 Oryza sativa ssp. japonica HOM05D006873 ORTHO05D008668 2.8e-28 130.6 165 43.0
Zm00001eb234150 Zea mays HOM05D006873 ORTHO05D008668 3.1e-27 127.1 198 35.9
SMO146G0062 Selaginella moellendorffii HOM05D006873 ORTHO05D008668 4.7e-23 113.2 205 33.7
Oeu001660.1 Olea europaea HOM05D006873 ORTHO05D008668 6.1e-23 112.8 127 50.4
Duzib251G0321 Durio zibethinus HOM05D006873 ORTHO05D008668 8.0e-23 112.5 168 39.3
CsaV3_5G025680 Cucumis sativus L. HOM05D006873 ORTHO05D008668 2.5e-16 90.9 136 41.2
CsaV3_5G025690 Cucumis sativus L. HOM05D006873 ORTHO05D008668 2.8e-15 87.4 91 50.5
AUR62018459 Chenopodium quinoa HOM05D000676 ORTHO05D001458 1.4e-14 85.1 64 60.9
Ah.13g077500 Amaranthus hybridus HOM05D006873 ORTHO05D008668 5.7e-13 79.7 70 57.1


User provided reference genes

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