Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold141G35560 Striga asiatica HOM05D003457 ORTHO05D009746 2.0e-246 855.5 498 100.0
Migut.F00989 Erythranthe guttata HOM05D003457 ORTHO05D009746 7.1e-151 538.1 499 58.7
MSTRG.30 Avicennia marina HOM05D003457 ORTHO05D009746 1.6e-147 526.9 498 62.9
SalBow2G2559 Salvia bowleyana HOM05D003457 ORTHO05D009746 6.0e-142 508.4 492 56.9
Oeu061029.1 Olea europaea HOM05D000015 ORTHO05D001173 7.1e-135 485.0 486 61.3
Nitab4.5_0000319g0080 Nicotiana tabacum HOM05D003457 ORTHO05D009746 3.0e-133 479.6 482 58.9
Peaxi162Scf00300g00834 Petunia axillaris HOM05D003457 ORTHO05D009746 9.6e-132 474.6 443 58.2
Nitab4.5_0005040g0020 Nicotiana tabacum HOM05D003457 ORTHO05D009746 1.0e-128 464.5 427 62.8
Cc02_g00830 Coffea canephora HOM05D003457 ORTHO05D009746 8.4e-128 461.5 441 54.9
PGSC0003DMG400000587 Solanum tuberosum HOM05D003457 ORTHO05D009746 8.4e-128 461.5 499 57.9
CAN.G303.16 Capsicum annuum HOM05D003457 ORTHO05D009746 5.5e-127 458.8 497 56.5
Sopen03g022020 Solanum pennellii HOM05D003457 ORTHO05D009746 1.8e-125 453.8 487 57.9
Solyc03g081300.4 Solanum lycopersicum HOM05D003457 ORTHO05D009746 3.3e-124 449.5 486 52.1
CSS0016304 Camellia sinensis var. sinensis HOM05D003457 ORTHO05D009746 5.7e-124 448.7 447 52.6
CSS0014628 Camellia sinensis var. sinensis HOM05D003457 ORTHO05D009746 2.2e-120 436.8 416 54.3
Actinidia28281 Actinidia chinensis HOM05D003457 ORTHO05D009746 2.9e-120 436.4 455 52.1
Dinv35380 Davidia involucrata HOM05D003457 ORTHO05D009746 1.4e-119 434.1 463 51.2
Lj1P1027T26 Lonicera japonica HOM05D003457 ORTHO05D009746 2.1e-118 430.3 423 60.5
TAR375G1036 Trochodendron aralioides HOM05D003457 ORTHO05D009746 1.3e-115 421.0 459 50.3
Cpa.g.sc3.154 Carica papaya HOM05D003457 ORTHO05D009746 4.8e-115 419.1 508 46.7
Haze_00295 Corylus avellana HOM05D003457 ORTHO05D009746 1.8e-114 417.2 456 50.0
Thecc.03G208500 Theobroma cacao HOM05D003457 ORTHO05D009746 2.4e-114 416.8 427 51.3
Cfa016161 Carpinus fangiana HOM05D003457 ORTHO05D009746 5.3e-114 415.6 456 49.1
Rhsim09G0209500 Rhododendron simsii HOM05D003457 ORTHO05D009746 1.5e-113 414.1 463 49.7
Aqoxy4G02698 Aquilegia oxysepala HOM05D003457 ORTHO05D009746 1.3e-112 411.0 419 58.2
vmacro10157 Vaccinium macrocarpon HOM05D003457 ORTHO05D009746 1.3e-112 411.0 458 49.8
CiPaw.06G041300 Carya illinoinensis HOM05D003457 ORTHO05D009746 2.1e-110 403.7 515 44.7
QL09p007206 Quercus lobata HOM05D003457 ORTHO05D009746 2.7e-110 403.3 453 48.3
DCAR_010575 Daucus carota HOM05D003457 ORTHO05D009746 1.0e-109 401.4 432 49.8
HanXRQChr07g0206571 Helianthus annuus HOM05D003457 ORTHO05D009746 2.0e-108 397.1 458 50.2
GSVIVG01038641001 Vitis vinifera HOM05D000015 ORTHO05D001173 2.0e-108 397.1 440 49.3
Manes.05G197700 Manihot esculenta HOM05D003457 ORTHO05D009746 2.2e-107 393.7 419 50.1
Sabra15G0003700 Salix brachista HOM05D003457 ORTHO05D009746 6.3e-107 392.1 449 49.9
TWI23G0525 Tripterygium wilfordii HOM05D003457 ORTHO05D009746 1.1e-106 391.3 446 47.8
Sc13g0010270 Simmondsia chinensis HOM05D003457 ORTHO05D009746 1.4e-106 391.0 415 49.6
Eucgr.K00438 Eucalyptus grandis HOM05D003457 ORTHO05D009746 5.3e-106 389.0 475 52.2
PGR142G0010 Punica granatum HOM05D003457 ORTHO05D009746 9.1e-106 388.3 421 55.6
Gohir.D04G000055 Gossypium hirsutum HOM05D003457 ORTHO05D009746 2.0e-105 387.1 418 55.3
Potri.015G005200 Populus trichocarpa HOM05D003457 ORTHO05D009746 3.5e-105 386.3 450 49.3
Gorai.012G000800 Gossypium raimondii HOM05D003457 ORTHO05D009746 4.5e-105 386.0 418 55.0
Lsat_1_v5_gn_2_136541 Lactuca sativa HOM05D003457 ORTHO05D009746 4.5e-105 386.0 432 54.4
Ciclev10023265m.g Citrus clementina HOM05D003457 ORTHO05D009746 2.9e-104 383.3 409 50.1
Duzib205G0560 Durio zibethinus HOM05D003457 ORTHO05D009746 2.9e-104 383.3 504 49.4
Prupe.2G318700 Prunus persica HOM05D003457 ORTHO05D009746 1.4e-101 374.4 451 51.2
Atru.chr12.2427 Acer truncatum HOM05D003457 ORTHO05D009746 2.3e-101 373.6 448 46.4
FvH4_7g32910 Fragaria vesca HOM05D003457 ORTHO05D009746 2.3e-101 373.6 428 52.1
FAN01G1561 Fragaria x ananassa HOM05D003457 ORTHO05D009746 6.7e-101 372.1 418 51.9
Ah.07g204680 Amaranthus hybridus HOM05D003457 ORTHO05D009746 2.0e-100 370.5 425 47.5
RcHm_v2.0_Chr1g0382851 Rosa chinensis HOM05D003457 ORTHO05D009746 2.6e-100 370.2 466 50.6
FAN10G3191 Fragaria x ananassa HOM05D003457 ORTHO05D009746 3.3e-100 369.8 418 51.2
Eucgr.K00434 Eucalyptus grandis HOM05D003457 ORTHO05D009746 2.8e-99 366.7 480 49.0
AUR62035620 Chenopodium quinoa HOM05D003457 ORTHO05D009746 8.2e-99 365.2 425 47.1
Lalb_Chr08g0239621 Lupinus albus HOM05D003457 ORTHO05D009746 8.2e-99 365.2 427 48.7
EL10Ac3g05181 Beta vulgaris HOM05D003457 ORTHO05D009746 1.1e-98 364.8 499 43.7
Carub.0008s1449 Capsella rubella HOM05D003457 ORTHO05D009746 2.4e-98 363.6 490 43.7
COL.COLO4_14369 Corchorus olitorius HOM05D000015 ORTHO05D001173 2.4e-98 363.6 390 50.0
Sp6g16240 Schrenkiella parvula HOM05D003457 ORTHO05D009746 7.7e-97 358.6 454 44.5
ECA238G0072 Erigeron canadensis HOM05D003457 ORTHO05D009746 1.7e-96 357.5 483 50.1
CARHR267390 Cardamine hirsuta HOM05D003457 ORTHO05D009746 2.2e-96 357.1 468 44.4
AUR62006007 Chenopodium quinoa HOM05D003457 ORTHO05D009746 2.9e-96 356.7 402 48.3
BraA10t43244Z Brassica rapa HOM05D003457 ORTHO05D009746 3.8e-96 356.3 485 42.9
A10p11500 Brassica napus HOM05D003457 ORTHO05D009746 6.5e-96 355.5 452 44.0
BolC9t57320H Brassica oleracea HOM05D003457 ORTHO05D009746 6.5e-96 355.5 452 44.0
Aa31LG3G9830 Aethionema arabicum HOM05D003457 ORTHO05D009746 8.5e-96 355.1 467 44.5
AT5G54180 Arabidopsis thaliana HOM05D003457 ORTHO05D009746 1.5e-95 354.4 449 45.9
AL8G29400 Arabidopsis lyrata HOM05D003457 ORTHO05D009746 4.2e-95 352.8 492 43.5
Hund21057 Selenicereus undatus HOM05D003457 ORTHO05D009746 9.4e-95 351.7 443 48.8
Phvul.009G045200 Phaseolus vulgaris HOM05D003457 ORTHO05D009746 1.2e-94 351.3 444 43.7
C09p44480 Brassica napus HOM05D003457 ORTHO05D009746 1.6e-94 350.9 452 43.8
Glyma.04G228500 Glycine max HOM05D003457 ORTHO05D009746 2.7e-94 350.1 433 43.9
MBI04_g27236_MAGBIO Magnolia biondii HOM05D003457 ORTHO05D009746 6.1e-94 349.0 418 57.4
VMungo1309G1701 Vigna mungo HOM05D003457 ORTHO05D009746 1.8e-93 347.4 485 41.2
FAN03G1743 Fragaria x ananassa HOM05D003457 ORTHO05D009746 2.2e-91 340.5 388 52.6
Medtr3g092710 Medicago truncatula HOM05D003457 ORTHO05D009746 2.2e-91 340.5 443 42.2
Gohir.D04G000085 Gossypium hirsutum HOM05D003457 ORTHO05D009746 1.1e-90 338.2 394 52.8
Eucgr.K00030 Eucalyptus grandis HOM05D003457 ORTHO05D009746 4.1e-90 336.3 418 46.4
Thhalv10013278m.g Eutrema salsugineum HOM05D003457 ORTHO05D009746 3.5e-89 333.2 475 42.9
Lj1g0013970 Lotus japonicus HOM05D003457 ORTHO05D009746 1.0e-88 331.6 420 51.7
TPR.G33660 Trifolium pratense HOM05D003457 ORTHO05D009746 1.8e-85 320.9 420 46.7
THA.LOC104799988 Tarenaya hassleriana HOM05D003457 ORTHO05D009746 8.8e-85 318.5 392 48.0
THA.LOC104811888 Tarenaya hassleriana HOM05D003457 ORTHO05D009746 2.6e-84 317.0 450 44.0
Ca_16778_v3 Cicer arietinum L. HOM05D003457 ORTHO05D009746 9.5e-79 298.5 338 45.3
ATR1155G022 Amborella trichopoda HOM05D003457 ORTHO05D009746 6.0e-65 252.7 433 38.3
FAN10G0211 Fragaria x ananassa HOM05D003457 ORTHO05D009746 1.4e-61 241.5 343 41.4
unitig_578.g16677 Utricularia gibba HOM05D003457 ORTHO05D009746 1.1e-53 215.3 254 48.4
unitig_578.g16678 Utricularia gibba HOM05D003457 ORTHO05D009746 1.5e-39 168.3 114 69.3
FAN03G0889 Fragaria x ananassa HOM05D003457 ORTHO05D009746 1.6e-38 164.9 131 60.3
Eucgr.K00356 Eucalyptus grandis HOM05D003457 ORTHO05D009746 7.6e-36 156.0 131 57.3
CDE11G0872 Ceratophyllum demersum HOM05D000283 ORTHO05D000358 5.1e-32 143.3 99 69.7
Nn1g00446 Nelumbo nucifera HOM05D003457 ORTHO05D009746 4.3e-31 140.2 91 71.4
ATR0598G078 Amborella trichopoda HOM05D003457 ORTHO05D009746 4.6e-25 120.2 417 34.5
TAR628G0006 Trochodendron aralioides HOM05D002811 ORTHO05D003053 1.6e-17 95.1 64 68.8
CDE04G1753 Ceratophyllum demersum HOM05D003457 ORTHO05D009746 4.1e-13 80.5 126 36.5
CDE11G0288 Ceratophyllum demersum HOM05D003457 ORTHO05D009746 2.7e-09 67.8 125 35.2
Glyma.03G114500 Glycine max HOM05D001504 ORTHO05D001394 2.3e-08 64.7 100 34.0
Glyma.07G112100 Glycine max HOM05D001504 ORTHO05D001394 3.0e-08 64.3 100 33.0
HanXRQChr01g0009651 Helianthus annuus HOM05D001504 ORTHO05D001394 3.0e-08 64.3 139 31.7
Phvul.010G052250 Phaseolus vulgaris HOM05D001504 ORTHO05D001394 3.0e-08 64.3 100 32.0
VMungo0331G1862 Vigna mungo HOM05D001504 ORTHO05D001394 6.7e-08 63.2 93 34.4
CiPaw.16G005800 Carya illinoinensis HOM05D002901 ORTHO05D003183 3.3e-07 60.8 100 35.0
Duzib138G1733 Durio zibethinus HOM05D001504 ORTHO05D001394 4.3e-07 60.5 418 23.2
SHI09181 Sapria himalayana HOM05D002901 ORTHO05D003183 5.7e-07 60.1 97 33.0
Psat4g225480 Pisum sativum HOM05D001504 ORTHO05D001394 7.4e-07 59.7 100 33.0
Rhsim11G0177400 Rhododendron simsii HOM05D005605 ORTHO05D007615 7.4e-07 59.7 106 35.8
TPR.G33114 Trifolium pratense HOM05D001504 ORTHO05D001394 7.4e-07 59.7 100 32.0
CBR_g45638 Chara braunii HOM05D005605 ORTHO05D001299 9.7e-07 59.3 100 37.0
COL.COLO4_13997 Corchorus olitorius HOM05D002901 ORTHO05D003183 1.3e-06 58.9 93 36.6
Lj3g0011747 Lotus japonicus HOM05D005605 ORTHO05D007615 1.3e-06 58.9 140 30.0
vmacro02103 Vaccinium macrocarpon HOM05D005605 ORTHO05D007615 1.3e-06 58.9 106 35.8
Cfa018219 Carpinus fangiana HOM05D002901 ORTHO05D003183 2.8e-06 57.8 100 32.0
ECA248G0529 Erigeron canadensis HOM05D001504 ORTHO05D001394 2.8e-06 57.8 130 30.8
QL07p030484 Quercus lobata HOM05D002901 ORTHO05D003183 2.8e-06 57.8 100 33.0
SalBow6G0139 Salvia bowleyana HOM05D001504 ORTHO05D001394 2.8e-06 57.8 128 28.1
VMungo0251G0115 Vigna mungo HOM05D002901 ORTHO05D003183 2.8e-06 57.8 100 32.0
FAN23G2662 Fragaria x ananassa HOM05D002901 ORTHO05D003183 3.7e-06 57.4 100 32.0
Oeu033743.1 Olea europaea HOM05D001504 ORTHO05D001394 3.7e-06 57.4 133 29.3
Phvul.002G321600 Phaseolus vulgaris HOM05D002901 ORTHO05D003183 3.7e-06 57.4 100 31.0
MSTRG.6470 Avicennia marina HOM05D001504 ORTHO05D001394 4.8e-06 57.0 133 29.3
AUR62022324 Chenopodium quinoa HOM05D002901 ORTHO05D003183 4.8e-06 57.0 100 31.0
Haze_17884 Corylus avellana HOM05D002901 ORTHO05D003183 4.8e-06 57.0 100 31.0
ECA234G1179 Erigeron canadensis HOM05D000093 ORTHO05D001309 4.8e-06 57.0 100 32.0
FAN28G2975 Fragaria x ananassa HOM05D002901 ORTHO05D003183 4.8e-06 57.0 100 32.0
HanXRQChr09g0245761 Helianthus annuus HOM05D002901 ORTHO05D003183 4.8e-06 57.0 100 32.0
Lalb_Chr16g0387491 Lupinus albus HOM05D002901 ORTHO05D003183 4.8e-06 57.0 100 31.0
EL10Ac1g00788 Beta vulgaris HOM05D001504 ORTHO05D001394 6.3e-06 56.6 105 31.4
Ca_14053_v3 Cicer arietinum L. HOM05D001504 ORTHO05D001394 6.3e-06 56.6 100 31.0
Migut.B00234 Erythranthe guttata HOM05D005605 ORTHO05D007615 6.3e-06 56.6 106 34.0
FAN19G2769 Fragaria x ananassa HOM05D002901 ORTHO05D003183 6.3e-06 56.6 100 31.0
SMO139G0112 Selaginella moellendorffii HOM05D002901 ORTHO05D003183 6.3e-06 56.6 76 39.5
Thecc.01G124400 Theobroma cacao HOM05D002901 ORTHO05D003183 6.3e-06 56.6 96 35.4
Actinidia12657 Actinidia chinensis HOM05D001504 ORTHO05D001394 8.2e-06 56.2 134 34.3
MELO3C026620.2 Cucumis melo HOM05D002901 ORTHO05D003183 8.2e-06 56.2 95 33.7
ECA248G1159 Erigeron canadensis HOM05D002901 ORTHO05D003183 8.2e-06 56.2 100 32.0
FvH4_1g27270 Fragaria vesca HOM05D002901 ORTHO05D003183 8.2e-06 56.2 100 31.0
FvH4_1g27350 Fragaria vesca HOM05D002901 ORTHO05D003183 8.2e-06 56.2 100 31.0
Medtr8g005155 Medicago truncatula HOM05D001504 ORTHO05D001394 8.2e-06 56.2 94 31.9
Pp3c22_840 Physcomitrium patens HOM05D002901 ORTHO05D003183 8.2e-06 56.2 99 36.4
Sed0026481 Sechium edule HOM05D002901 ORTHO05D003183 8.2e-06 56.2 102 31.4
Thecc.01G392100 Theobroma cacao HOM05D001504 ORTHO05D001394 8.2e-06 56.2 446 22.4


User provided reference genes

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