Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold1356G53925 Striga asiatica HOM05D002170 ORTHO05D007478 1.3e-78 296.2 142 100.0
Prupe.5G236800 Prunus persica HOM05D002170 ORTHO05D007478 2.6e-58 228.8 118 93.2
MSTRG.9351 Avicennia marina HOM05D002170 ORTHO05D007478 3.4e-58 228.4 122 90.2
Solyc03g097910.4 Solanum lycopersicum HOM05D002170 ORTHO05D007478 2.9e-57 225.3 119 90.8
Sopen03g028630 Solanum pennellii HOM05D002170 ORTHO05D007478 2.9e-57 225.3 119 90.8
PGSC0003DMG400033683 Solanum tuberosum HOM05D002170 ORTHO05D007478 2.9e-57 225.3 119 90.8
CAN.G637.44 Capsicum annuum HOM05D002170 ORTHO05D007478 5.0e-57 224.6 122 88.5
MD06G1232500 Malus domestica HOM05D002170 ORTHO05D007478 1.1e-56 223.4 118 89.8
MD14G1239300 Malus domestica HOM05D002170 ORTHO05D007478 1.1e-56 223.4 118 89.8
Hma1.2p1_0471F.1_g159440 Hydrangea macrophylla HOM05D002170 ORTHO05D007478 1.9e-56 222.6 118 90.7
Migut.D01219 Erythranthe guttata HOM05D002170 ORTHO05D007478 3.2e-56 221.9 118 90.7
Lj2g0009559 Lotus japonicus HOM05D002170 ORTHO05D007478 5.5e-56 221.1 119 89.1
Actinidia09052 Actinidia chinensis HOM05D002170 ORTHO05D007478 7.2e-56 220.7 118 89.8
CiPaw.15G147300 Carya illinoinensis HOM05D002170 ORTHO05D007478 7.2e-56 220.7 119 88.2
CANSAT35G0706 Cannabis sativa HOM05D002170 ORTHO05D007478 9.3e-56 220.3 118 89.0
TAR629G0118 Trochodendron aralioides HOM05D002170 ORTHO05D007478 1.6e-55 219.5 118 88.1
Dinv05998 Davidia involucrata HOM05D002170 ORTHO05D007478 2.1e-55 219.2 118 89.0
FvH4_5g17680 Fragaria vesca HOM05D002170 ORTHO05D007478 2.1e-55 219.2 118 88.1
FAN18G3495 Fragaria x ananassa HOM05D002170 ORTHO05D007478 2.1e-55 219.2 118 88.1
CSS0042449 Camellia sinensis var. sinensis HOM05D002170 ORTHO05D007478 6.1e-55 217.6 118 89.8
Rhsim08G0127800 Rhododendron simsii HOM05D002170 ORTHO05D007478 6.1e-55 217.6 118 88.1
Sc04g0004500 Simmondsia chinensis HOM05D002170 ORTHO05D007478 6.1e-55 217.6 118 88.1
Cc04_g09360 Coffea canephora HOM05D002170 ORTHO05D007478 7.9e-55 217.2 118 87.3
FAN08G0558 Fragaria x ananassa HOM05D002170 ORTHO05D007478 1.0e-54 216.9 118 87.3
QL10p031496 Quercus lobata HOM05D002170 ORTHO05D007478 1.0e-54 216.9 118 87.3
SalBow5G3655 Salvia bowleyana HOM05D002170 ORTHO05D007478 1.0e-54 216.9 122 85.2
Gohir.A09G175200 Gossypium hirsutum HOM05D002170 ORTHO05D007478 1.8e-54 216.1 118 87.3
Gorai.006G191200 Gossypium raimondii HOM05D002170 ORTHO05D007478 1.8e-54 216.1 118 87.3
RcHm_v2.0_Chr7g0177971 Rosa chinensis HOM05D002170 ORTHO05D007478 1.8e-54 216.1 118 87.3
Lalb_Chr14g0370711 Lupinus albus HOM05D002170 ORTHO05D007478 2.3e-54 215.7 118 86.4
Atru.BG.197.p Acer truncatum HOM05D002170 ORTHO05D007478 3.9e-54 214.9 118 87.3
Atru.chr9.1597 Acer truncatum HOM05D002170 ORTHO05D007478 3.9e-54 214.9 118 87.3
Haze_18913 Corylus avellana HOM05D002170 ORTHO05D007478 3.9e-54 214.9 118 87.3
vmacro17769 Vaccinium macrocarpon HOM05D002170 ORTHO05D007478 3.9e-54 214.9 118 87.3
Aqoxy3G04073 Aquilegia oxysepala HOM05D002170 ORTHO05D007478 5.1e-54 214.5 118 86.4
CSS0009402 Camellia sinensis var. sinensis HOM05D002170 ORTHO05D007478 5.1e-54 214.5 118 89.0
FAN04G0031 Fragaria x ananassa HOM05D002170 ORTHO05D007478 5.1e-54 214.5 118 86.4
TWI81G0098 Tripterygium wilfordii HOM05D002170 ORTHO05D007478 5.1e-54 214.5 118 86.4
Glyma.09G172700 Glycine max HOM05D002170 ORTHO05D007478 6.7e-54 214.2 118 86.4
Gohir.D09G169700 Gossypium hirsutum HOM05D002170 ORTHO05D007478 6.7e-54 214.2 118 86.4
unitig_27.g25082 Utricularia gibba HOM05D002170 ORTHO05D007478 8.7e-54 213.8 122 85.2
Ciclev10020301m.g Citrus clementina HOM05D002170 ORTHO05D007478 1.1e-53 213.4 121 83.5
Glyma.07G105400 Glycine max HOM05D002170 ORTHO05D007478 1.1e-53 213.4 118 85.6
Oeu023513.1 Olea europaea HOM05D002170 ORTHO05D007478 1.1e-53 213.4 118 87.3
GSVIVG01008478001 Vitis vinifera HOM05D002170 ORTHO05D007478 1.1e-53 213.4 118 89.0
Ca_25357_v3 Cicer arietinum L. HOM05D002170 ORTHO05D007478 1.9e-53 212.6 118 87.3
PSO339G1858 Papaver somniferum HOM05D002170 ORTHO05D007478 1.9e-53 212.6 118 86.4
PSO384G2182 Papaver somniferum HOM05D002170 ORTHO05D007478 1.9e-53 212.6 118 86.4
COL.COLO4_18962 Corchorus olitorius HOM05D002170 ORTHO05D005003 2.5e-53 212.2 118 87.3
MELO3C002149.2 Cucumis melo HOM05D002170 ORTHO05D007478 2.5e-53 212.2 118 86.4
Eucgr.K02286 Eucalyptus grandis HOM05D002170 ORTHO05D007478 3.3e-53 211.8 119 84.9
Manes.06G002900 Manihot esculenta HOM05D002170 ORTHO05D007478 3.3e-53 211.8 118 85.6
Hund22449 Selenicereus undatus HOM05D002170 ORTHO05D007478 3.3e-53 211.8 118 88.1
THA.LOC104820334 Tarenaya hassleriana HOM05D002170 ORTHO05D007478 3.3e-53 211.8 118 85.6
CiPaw.16G097200 Carya illinoinensis HOM05D002170 ORTHO05D007478 4.3e-53 211.5 118 86.4
A05p32010 Brassica napus HOM05D002170 ORTHO05D007478 5.7e-53 211.1 118 86.4
CsaV3_1G007330 Cucumis sativus L. HOM05D002170 ORTHO05D007478 5.7e-53 211.1 118 85.6
Phvul.004G148000 Phaseolus vulgaris HOM05D002170 ORTHO05D007478 5.7e-53 211.1 118 84.7
Cfa020634 Carpinus fangiana HOM05D002170 ORTHO05D007478 7.4e-53 210.7 119 86.6
ClCG04G010450 Citrullus lanatus HOM05D002170 ORTHO05D007478 7.4e-53 210.7 118 85.6
DCAR_003532 Daucus carota HOM05D002170 ORTHO05D007478 7.4e-53 210.7 118 85.6
Potri.015G030600 Populus trichocarpa HOM05D002170 ORTHO05D007478 7.4e-53 210.7 118 85.6
TPR.G22320 Trifolium pratense HOM05D002170 ORTHO05D007478 7.4e-53 210.7 118 86.4
Medtr6g071210 Medicago truncatula HOM05D002170 ORTHO05D007478 9.7e-53 210.3 118 85.6
arahy.Tifrunner.gnm1.ann1.DTQ5EB Arachis hypogaea HOM05D002170 ORTHO05D007478 1.3e-52 209.9 118 84.7
arahy.Tifrunner.gnm1.ann1.U6RNCV Arachis hypogaea HOM05D002170 ORTHO05D007478 1.3e-52 209.9 118 84.7
C05p48530 Brassica napus HOM05D002170 ORTHO05D007478 1.3e-52 209.9 118 85.6
Sabra15G0025500 Salix brachista HOM05D002170 ORTHO05D007478 1.3e-52 209.9 119 84.9
SEGI_10571 Sequoiadendron giganteum HOM05D002170 ORTHO05D007478 1.3e-52 209.9 118 86.4
Thecc.03G062200 Theobroma cacao HOM05D002170 ORTHO05D007478 1.3e-52 209.9 118 84.7
BolC5t33589H Brassica oleracea HOM05D002170 ORTHO05D007478 1.6e-52 209.5 118 85.6
CDE06G2490 Ceratophyllum demersum HOM05D002170 ORTHO05D007478 1.6e-52 209.5 117 88.0
PGR044G0130 Punica granatum HOM05D002170 ORTHO05D007478 1.6e-52 209.5 119 84.9
Cpa.g.sc3.360 Carica papaya HOM05D002170 ORTHO05D007478 2.2e-52 209.1 118 84.7
Lalb_Chr22g0353421 Lupinus albus HOM05D002170 ORTHO05D007478 3.7e-52 208.4 118 83.9
EL10Ac2g03531 Beta vulgaris HOM05D002170 ORTHO05D007478 4.8e-52 208.0 118 86.4
BcaB04g18965 Brassica carinata HOM05D002170 ORTHO05D007478 4.8e-52 208.0 118 84.7
CDE04G1365 Ceratophyllum demersum HOM05D002170 ORTHO05D007478 4.8e-52 208.0 117 87.2
CARHR093160 Cardamine hirsuta HOM05D002170 ORTHO05D007478 6.3e-52 207.6 118 83.9
Psat1g029560 Pisum sativum HOM05D002170 ORTHO05D007478 6.3e-52 207.6 118 85.6
HPP92_007961 Vanilla planifolia HOM05D002170 ORTHO05D007478 8.2e-52 207.2 118 83.1
BcaNung05883 Brassica carinata HOM05D002170 ORTHO05D007478 1.1e-51 206.8 118 83.9
Duzib084G0411 Durio zibethinus HOM05D002170 ORTHO05D007478 1.1e-51 206.8 118 83.9
Lj9C416G6 Lonicera japonica HOM05D002170 ORTHO05D007478 1.1e-51 206.8 118 84.7
Ah.16g108010 Amaranthus hybridus HOM05D002170 ORTHO05D007478 1.4e-51 206.5 118 86.4
BcaC09g48741 Brassica carinata HOM05D002170 ORTHO05D007478 1.4e-51 206.5 118 84.7
A01p36570 Brassica napus HOM05D002170 ORTHO05D007478 1.4e-51 206.5 118 84.7
C01p46400 Brassica napus HOM05D002170 ORTHO05D007478 1.4e-51 206.5 118 84.7
BolC1t04600H Brassica oleracea HOM05D002170 ORTHO05D007478 1.4e-51 206.5 118 84.7
HanXRQChr16g0511571 Helianthus annuus HOM05D002170 ORTHO05D007478 1.4e-51 206.5 118 83.9
BcaB04g20814 Brassica carinata HOM05D002170 ORTHO05D007478 1.8e-51 206.1 118 84.7
HanXRQChr15g0492101 Helianthus annuus HOM05D002170 ORTHO05D007478 2.4e-51 205.7 118 83.9
Thhalv10020777m.g Eutrema salsugineum HOM05D002170 ORTHO05D007478 3.1e-51 205.3 118 84.7
Duzib068G1477 Durio zibethinus HOM05D002170 ORTHO05D007478 5.3e-51 204.5 118 83.1
ECA232G0406 Erigeron canadensis HOM05D002170 ORTHO05D007478 6.9e-51 204.1 118 83.1
Os02g0736400 Oryza sativa ssp. japonica HOM05D002170 ORTHO05D007478 6.9e-51 204.1 118 84.7
AUR62041617 Chenopodium quinoa HOM05D002170 ORTHO05D007478 9.1e-51 203.8 117 85.5
Potri.012G043300 Populus trichocarpa HOM05D002170 ORTHO05D007478 9.1e-51 203.8 118 83.9
Sed0008892 Sechium edule HOM05D002170 ORTHO05D007478 9.1e-51 203.8 118 82.2
Lsat_1_v5_gn_0_10461 Lactuca sativa HOM05D002170 ORTHO05D007478 1.5e-50 203.0 118 81.4
Carub.0003s1752 Capsella rubella HOM05D002170 ORTHO05D007478 2.0e-50 202.6 118 82.2
Sp3g15930 Schrenkiella parvula HOM05D002170 ORTHO05D007478 2.6e-50 202.2 118 83.1
AUR62036004 Chenopodium quinoa HOM05D002170 ORTHO05D007478 1.3e-49 199.9 117 83.8
BraA05t22032Z Brassica rapa HOM05D002170 ORTHO05D007478 1.7e-49 199.5 130 77.7
Zm00001eb253890 Zea mays HOM05D002170 ORTHO05D007478 1.7e-49 199.5 118 83.1
BraA01t03721Z Brassica rapa HOM05D002170 ORTHO05D007478 5.0e-49 198.0 126 78.6
AL3G30970 Arabidopsis lyrata HOM05D002170 ORTHO05D007478 1.4e-48 196.4 118 80.5
AT3G17810 Arabidopsis thaliana HOM05D002170 ORTHO05D007478 2.5e-48 195.7 118 81.4
Peaxi162Scf00171g01030 Petunia axillaris HOM05D002170 ORTHO05D007478 4.2e-48 194.9 119 81.5
Pp3c23_13670 Physcomitrium patens HOM05D002170 ORTHO05D007478 7.2e-48 194.1 118 82.2
SMO356G0689 Selaginella moellendorffii HOM05D002170 ORTHO05D007478 1.6e-47 193.0 118 78.0
SHI19063 Sapria himalayana HOM05D002170 ORTHO05D007478 2.7e-47 192.2 118 78.0
ATR0118G019 Amborella trichopoda HOM05D002170 ORTHO05D007478 1.8e-46 189.5 118 78.0
Mapoly0033s0018 Marchantia polymorpha HOM05D002170 ORTHO05D007478 1.8e-46 189.5 117 80.3
Pp3c20_21870 Physcomitrium patens HOM05D002170 ORTHO05D007478 1.8e-46 189.5 117 80.3
Aa31LG8G4690 Aethionema arabicum HOM05D002170 ORTHO05D007478 8.8e-46 187.2 151 64.9
AagrBONN_evm.TU.Sc2ySwM_362.1270 Anthoceros agrestis HOM05D002170 ORTHO05D007478 2.0e-45 186.0 118 74.6
C03p49210 Brassica napus HOM05D002170 ORTHO05D007478 2.0e-45 186.0 129 74.4
BolC3t17203H Brassica oleracea HOM05D002170 ORTHO05D007478 2.0e-45 186.0 129 74.4
Nitab4.5_0006581g0020 Nicotiana tabacum HOM05D002170 ORTHO05D007478 4.4e-45 184.9 99 90.9
Nitab4.5_0000430g0180 Nicotiana tabacum HOM05D002170 ORTHO05D007478 7.4e-45 184.1 99 90.9
PRCOL_00005290 Prasinoderma coloniale HOM05D002170 ORTHO05D007478 1.1e-43 180.3 117 75.2
CBR_g39071 Chara braunii HOM05D002170 ORTHO05D007478 2.0e-42 176.0 117 71.8
MCO10G163 Micromonas commoda HOM05D002170 ORTHO05D007478 1.4e-40 169.9 118 69.5
BcaC01g03730 Brassica carinata HOM05D002170 ORTHO05D007478 1.9e-40 169.5 118 74.6
Cre13.g578750 Chlamydomonas reinhardtii HOM05D002170 ORTHO05D007478 8.8e-38 160.6 116 65.5
MBI19_g09384_MAGBIO Magnolia biondii HOM05D003263 ORTHO05D004801 1.5e-32 143.3 81 87.7
Oeu016182.1 Olea europaea HOM05D002170 ORTHO05D007478 2.1e-23 112.8 82 73.2
Psat3g071120 Pisum sativum HOM05D002170 ORTHO05D327785 7.5e-21 104.4 106 57.5
Haze_26546 Corylus avellana HOM05D002170 ORTHO05D007478 2.7e-18 95.9 132 40.2
Haze_27328 Corylus avellana HOM05D002170 ORTHO05D007478 7.7e-18 94.4 123 41.5
MSTRG.4628 Avicennia marina HOM05D002170 ORTHO05D023792 8.3e-12 74.3 41 80.5
Phvul.008G096200 Phaseolus vulgaris HOM05D002170 ORTHO05D023792 1.1e-08 63.9 32 84.4
BraA03t13196Z Brassica rapa HOM05D002170 ORTHO05D023792 9.5e-08 60.8 32 81.2
A03p40410 Brassica napus HOM05D002170 ORTHO05D023792 8.0e-07 57.8 32 75.0


User provided reference genes

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