Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold12G06112 Striga asiatica HOM05D000104 ORTHO05D399261 3.3e-98 361.7 182 100.0
SGA_v2.0_scaffold248G44899 Striga asiatica HOM05D000104 ORTHO05D006241 1.5e-13 80.5 58 72.4
Migut.L00514 Erythranthe guttata HOM05D000104 ORTHO05D006241 3.1e-11 72.8 58 65.5
Cc07_g09410 Coffea canephora HOM05D000104 ORTHO05D006241 1.5e-10 70.5 57 63.2
Oeu024883.1 Olea europaea HOM05D000104 ORTHO05D006241 7.6e-10 68.2 58 62.1
Dinv39973 Davidia involucrata HOM05D000682 ORTHO05D006241 1.3e-09 67.4 57 63.2
Oeu044136.1 Olea europaea HOM05D000104 ORTHO05D006241 1.7e-09 67.0 58 58.6
MSTRG.15275 Avicennia marina HOM05D000104 ORTHO05D006241 2.9e-09 66.2 58 60.3
Hma1.2p1_0717F.1_g208150 Hydrangea macrophylla HOM05D000104 ORTHO05D006241 6.4e-09 65.1 60 58.3
CiPaw.01G036800 Carya illinoinensis HOM05D000104 ORTHO05D006241 2.4e-08 63.2 58 60.3
Solyc02g085390.4 Solanum lycopersicum HOM05D000104 ORTHO05D006241 2.4e-08 63.2 61 59.0
Sopen02g030080 Solanum pennellii HOM05D000104 ORTHO05D006241 2.4e-08 63.2 61 59.0
PGSC0003DMG400014895 Solanum tuberosum HOM05D000104 ORTHO05D006241 2.4e-08 63.2 58 60.3
Thhalv10003684m.g Eutrema salsugineum HOM05D000104 ORTHO05D006241 4.2e-08 62.4 61 52.5
Aqoxy5G01651 Aquilegia oxysepala HOM05D000104 ORTHO05D006241 5.5e-08 62.0 62 53.2
Nitab4.5_0000136g0450 Nicotiana tabacum HOM05D000104 ORTHO05D006241 9.3e-08 61.2 57 54.4
Actinidia19178 Actinidia chinensis HOM05D000104 ORTHO05D006241 1.2e-07 60.8 57 59.6
CSS0036611 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D006241 1.2e-07 60.8 57 57.9
Lsat_1_v5_gn_2_76200 Lactuca sativa HOM05D000104 ORTHO05D006241 1.2e-07 60.8 58 58.6
Nitab4.5_0004711g0010 Nicotiana tabacum HOM05D000104 ORTHO05D006241 1.2e-07 60.8 56 58.9
TAR376G0864 Trochodendron aralioides HOM05D000104 ORTHO05D020047 2.1e-07 60.1 60 58.3
Nitab4.5_0003233g0020 Nicotiana tabacum HOM05D000104 ORTHO05D006241 2.7e-07 59.7 57 52.6
vmacro01888 Vaccinium macrocarpon HOM05D000104 ORTHO05D006241 2.7e-07 59.7 57 57.9
vmacro01889 Vaccinium macrocarpon HOM05D000104 ORTHO05D006241 2.7e-07 59.7 57 57.9
BcaC04g23157 Brassica carinata HOM05D000104 ORTHO05D006241 3.5e-07 59.3 58 58.6
C09p11600 Brassica napus HOM05D000104 ORTHO05D006241 3.5e-07 59.3 58 58.6
BolC9t54052H Brassica oleracea HOM05D000104 ORTHO05D006241 3.5e-07 59.3 58 58.6
Aqoxy2G01756 Aquilegia oxysepala HOM05D004245 ORTHO05D004783 4.6e-07 58.9 62 51.6
CARHR280950 Cardamine hirsuta HOM05D000104 ORTHO05D006241 4.6e-07 58.9 57 54.4
MELO3C017558.2 Cucumis melo HOM05D000104 ORTHO05D006241 4.6e-07 58.9 55 61.8
QL06p045767 Quercus lobata HOM05D000104 ORTHO05D006241 4.6e-07 58.9 61 54.1
Sp2g29930 Schrenkiella parvula HOM05D000104 ORTHO05D006241 4.6e-07 58.9 57 54.4
DCAR_017263 Daucus carota HOM05D000104 ORTHO05D006241 6.0e-07 58.5 57 56.1
Peaxi162Scf00008g03717 Petunia axillaris HOM05D000104 ORTHO05D006241 6.0e-07 58.5 54 53.7
AT5G66750 Arabidopsis thaliana HOM05D000104 ORTHO05D006241 7.9e-07 58.2 57 54.4
Sed0015545 Sechium edule HOM05D000104 ORTHO05D006241 7.9e-07 58.2 57 52.6
Carub.0008s2774 Capsella rubella HOM05D000104 ORTHO05D006241 1.0e-06 57.8 57 54.4
ClCG07G009110 Citrullus lanatus HOM05D000104 ORTHO05D006241 1.0e-06 57.8 54 61.1
AL8G44720 Arabidopsis lyrata HOM05D000104 ORTHO05D006241 1.3e-06 57.4 57 54.4
HanXRQChr07g0192851 Helianthus annuus HOM05D000104 ORTHO05D006241 1.3e-06 57.4 59 55.9
PGSC0003DMG400015477 Solanum tuberosum HOM05D000104 ORTHO05D006241 1.3e-06 57.4 57 52.6
EL10Ac6g14940 Beta vulgaris HOM05D000104 ORTHO05D006241 1.8e-06 57.0 59 54.2
Manes.01G134600 Manihot esculenta HOM05D000104 ORTHO05D006241 1.8e-06 57.0 57 54.4
Sopen02g013810 Solanum pennellii HOM05D000104 ORTHO05D006241 3.0e-06 56.2 56 51.8
BraA09t36627Z Brassica rapa HOM05D000104 ORTHO05D006241 3.9e-06 55.8 55 58.2
COL.COLO4_22093 Corchorus olitorius HOM05D000104 ORTHO05D006241 3.9e-06 55.8 55 56.4
Hma1.2p1_0400F.1_g144480 Hydrangea macrophylla HOM05D000104 ORTHO05D006241 3.9e-06 55.8 57 52.6
vmacro17844 Vaccinium macrocarpon HOM05D000104 ORTHO05D006241 3.9e-06 55.8 60 51.7
AUR62003161 Chenopodium quinoa HOM05D000104 ORTHO05D006241 5.1e-06 55.5 60 53.3
Potri.019G129900 Populus trichocarpa HOM05D000104 ORTHO05D006241 5.1e-06 55.5 58 50.0
TAR381G0133 Trochodendron aralioides HOM05D000104 ORTHO05D006241 5.1e-06 55.5 58 53.4
GSVIVG01018979001 Vitis vinifera HOM05D000104 ORTHO05D006241 6.7e-06 55.1 58 56.9
BcaB04g20104 Brassica carinata HOM05D000104 ORTHO05D006241 8.7e-06 54.7 58 55.2
Cpa.g.sc55.93 Carica papaya HOM05D000104 ORTHO05D006241 8.7e-06 54.7 60 50.0
Peaxi162Scf00515g00516 Petunia axillaris HOM05D000104 ORTHO05D006241 8.7e-06 54.7 57 50.9


User provided reference genes

Program Settings