Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold122G33306 Striga asiatica HOM05D005942 ORTHO05D007209 0.0e+00 1491.9 766 100.0
MSTRG.10908 Avicennia marina HOM05D005942 ORTHO05D007209 1.7e-276 956.1 745 68.2
SalBow7G4809 Salvia bowleyana HOM05D005942 ORTHO05D007209 4.7e-263 911.4 743 64.5
Migut.I01134 Erythranthe guttata HOM05D005942 ORTHO05D007209 9.0e-262 907.1 729 64.3
CSS0026354 Camellia sinensis var. sinensis HOM05D005942 ORTHO05D007209 2.5e-227 792.7 720 59.4
Hma1.2p1_0090F.1_g045800 Hydrangea macrophylla HOM05D005942 ORTHO05D007209 3.2e-227 792.3 718 58.4
Dinv37817 Davidia involucrata HOM05D005942 ORTHO05D007209 3.9e-225 785.4 693 60.6
Dinv20380 Davidia involucrata HOM05D005942 ORTHO05D007209 1.3e-220 770.4 712 59.4
PGSC0003DMG400009149 Solanum tuberosum HOM05D005942 ORTHO05D007209 2.2e-220 769.6 734 56.8
Peaxi162Scf00038g02336 Petunia axillaris HOM05D005942 ORTHO05D007209 2.9e-220 769.2 733 57.0
Lj9C538T8 Lonicera japonica HOM05D005942 ORTHO05D007209 6.5e-220 768.1 749 55.7
Sopen03g041410 Solanum pennellii HOM05D005942 ORTHO05D007209 7.2e-219 764.6 696 58.0
CAN.G790.55 Capsicum annuum HOM05D005942 ORTHO05D007209 2.7e-218 762.7 734 56.3
Solyc03g123640.3 Solanum lycopersicum HOM05D005942 ORTHO05D007209 2.7e-218 762.7 733 56.2
ECA234G0243 Erigeron canadensis HOM05D005942 ORTHO05D007209 3.7e-215 752.3 734 54.5
TWI14G0802 Tripterygium wilfordii HOM05D005942 ORTHO05D007209 1.0e-212 744.2 726 53.9
Nitab4.5_0006338g0060 Nicotiana tabacum HOM05D005942 ORTHO05D007209 2.9e-212 742.7 697 57.5
QL05p001132 Quercus lobata HOM05D005942 ORTHO05D007209 7.2e-211 738.0 742 54.7
Lsat_1_v5_gn_5_137681 Lactuca sativa HOM05D005942 ORTHO05D007209 2.7e-210 736.1 705 54.9
Oeu019509.2 Olea europaea HOM05D005942 ORTHO05D007209 3.6e-210 735.7 593 63.6
QL05p000862 Quercus lobata HOM05D005942 ORTHO05D007209 6.1e-210 734.9 742 54.4
DCAR_007660 Daucus carota HOM05D005942 ORTHO05D007209 8.0e-210 734.6 687 56.6
CiPaw.02G130800 Carya illinoinensis HOM05D005942 ORTHO05D007209 6.7e-209 731.5 702 55.3
GSVIVG01016664001 Vitis vinifera HOM05D005942 ORTHO05D007209 2.0e-208 729.9 699 55.7
Prupe.3G030900 Prunus persica HOM05D005942 ORTHO05D007209 2.2e-207 726.5 687 55.3
Cc04_g00670 Coffea canephora HOM05D005942 ORTHO05D007209 4.8e-207 725.3 704 56.7
Thecc.06G130500 Theobroma cacao HOM05D005942 ORTHO05D007209 5.3e-206 721.8 692 55.3
Rhsim08G0245000 Rhododendron simsii HOM05D005942 ORTHO05D007209 3.5e-205 719.2 721 54.0
TAR624G0006 Trochodendron aralioides HOM05D005942 ORTHO05D007209 4.5e-205 718.8 742 52.7
Potri.003G073000 Populus trichocarpa HOM05D005942 ORTHO05D007209 9.4e-203 711.1 658 56.7
CsaV3_7G033920 Cucumis sativus L. HOM05D005942 ORTHO05D007209 8.0e-202 708.0 691 53.7
CANSAT56G3801 Cannabis sativa HOM05D005942 ORTHO05D007209 2.3e-201 706.4 686 53.5
PGR102G3180 Punica granatum HOM05D005942 ORTHO05D007209 2.3e-201 706.4 716 53.8
Ciclev10024928m.g Citrus clementina HOM05D005942 ORTHO05D007209 4.8e-199 698.7 724 53.3
COL.COLO4_30871 Corchorus olitorius HOM05D005942 ORTHO05D007209 1.1e-198 697.6 654 54.9
Gohir.D05G144100 Gossypium hirsutum HOM05D005942 ORTHO05D007209 1.4e-198 697.2 678 54.1
Gorai.009G148000 Gossypium raimondii HOM05D005942 ORTHO05D007209 4.1e-198 695.7 678 54.0
Duzib192G0321 Durio zibethinus HOM05D005942 ORTHO05D007209 9.1e-198 694.5 655 54.8
ClCG09G001410 Citrullus lanatus HOM05D005942 ORTHO05D007209 1.6e-197 693.7 700 51.6
Gohir.A05G141800 Gossypium hirsutum HOM05D005942 ORTHO05D007209 2.0e-197 693.3 641 55.5
Aqoxy7G00926 Aquilegia oxysepala HOM05D005942 ORTHO05D007209 1.9e-195 686.8 645 55.0
Sabra03G0043700 Salix brachista HOM05D005942 ORTHO05D007209 7.2e-195 684.9 751 51.8
Thhalv10018182m.g Eutrema salsugineum HOM05D005942 ORTHO05D007209 2.1e-194 683.3 726 50.4
Nn3g21985 Nelumbo nucifera HOM05D005942 ORTHO05D007209 3.0e-193 679.5 748 50.9
THA.LOC104813965 Tarenaya hassleriana HOM05D005942 ORTHO05D007209 3.0e-193 679.5 727 51.3
Aa31LG4G2680 Aethionema arabicum HOM05D005942 ORTHO05D007209 1.5e-192 677.2 729 49.9
Carub.0002s1918 Capsella rubella HOM05D005942 ORTHO05D007209 1.5e-192 677.2 721 50.1
Sed0028190 Sechium edule HOM05D005942 ORTHO05D007209 4.4e-192 675.6 721 50.8
AUR62001402 Chenopodium quinoa HOM05D005942 ORTHO05D007209 5.7e-192 675.2 715 51.7
AL2G32000 Arabidopsis lyrata HOM05D005942 ORTHO05D007209 7.5e-192 674.9 735 49.7
AUR62025613 Chenopodium quinoa HOM05D005942 ORTHO05D007209 7.5e-192 674.9 746 50.1
MELO3C024305.2 Cucumis melo HOM05D005942 ORTHO05D007209 9.8e-192 674.5 725 50.3
MD09G1172500 Malus domestica HOM05D005942 ORTHO05D007209 2.2e-191 673.3 703 51.4
HanXRQChr10g0311801 Helianthus annuus HOM05D005942 ORTHO05D007209 3.1e-190 669.5 750 50.0
Haze_16138 Corylus avellana HOM05D005942 ORTHO05D007209 4.1e-190 669.1 869 45.2
CARHR065220 Cardamine hirsuta HOM05D005942 ORTHO05D007209 5.4e-190 668.7 749 49.5
AT1G72320 Arabidopsis thaliana HOM05D005942 ORTHO05D007209 3.5e-189 666.0 732 48.8
Sp5g27400 Schrenkiella parvula HOM05D005942 ORTHO05D007209 1.0e-188 664.5 719 49.9
Medtr7g117545 Medicago truncatula HOM05D005942 ORTHO05D007209 5.0e-188 662.1 645 52.4
Hund18636 Selenicereus undatus HOM05D005942 ORTHO05D007209 5.5e-187 658.7 707 50.8
Eucgr.J02595 Eucalyptus grandis HOM05D005942 ORTHO05D007209 7.2e-187 658.3 751 48.6
Lj1g0014309 Lotus japonicus HOM05D005942 ORTHO05D007209 7.2e-187 658.3 664 50.9
Lalb_Chr15g0076691 Lupinus albus HOM05D005942 ORTHO05D007209 4.7e-186 655.6 725 48.4
PSO170G5566 Papaver somniferum HOM05D005942 ORTHO05D007209 4.7e-186 655.6 655 54.0
Ah.15g094920 Amaranthus hybridus HOM05D005942 ORTHO05D007209 6.1e-186 655.2 707 50.9
FvH4_6g35860 Fragaria vesca HOM05D005942 ORTHO05D007209 6.1e-186 655.2 714 51.1
PSO017G1617 Papaver somniferum HOM05D005942 ORTHO05D007209 8.0e-186 654.8 655 53.6
TPR.G28866 Trifolium pratense HOM05D005942 ORTHO05D007209 8.0e-186 654.8 684 50.3
VMungo1309G0067 Vigna mungo HOM05D005942 ORTHO05D007209 8.0e-186 654.8 719 48.3
EL10Ac7g16496 Beta vulgaris HOM05D005942 ORTHO05D007209 4.0e-185 652.5 679 53.0
RcHm_v2.0_Chr2g0147901 Rosa chinensis HOM05D005942 ORTHO05D007209 1.2e-184 651.0 721 49.9
Glyma.03G263200 Glycine max HOM05D005942 ORTHO05D007209 1.5e-184 650.6 709 48.8
Phvul.009G261600 Phaseolus vulgaris HOM05D005942 ORTHO05D007209 1.5e-184 650.6 695 48.5
BcaC08g46688 Brassica carinata HOM05D005942 ORTHO05D007209 5.7e-184 648.7 716 48.7
Atru.chr1.4156 Acer truncatum HOM05D005942 ORTHO05D007209 3.7e-183 646.0 711 52.0
A07p38500 Brassica napus HOM05D005942 ORTHO05D007209 2.4e-182 643.3 747 47.4
BolC6t39713H Brassica oleracea HOM05D005942 ORTHO05D007209 3.1e-182 642.9 724 48.2
FAN14G4637 Fragaria x ananassa HOM05D005942 ORTHO05D007209 3.1e-182 642.9 714 50.3
FAN02G3526 Fragaria x ananassa HOM05D005942 ORTHO05D007209 4.1e-182 642.5 745 48.5
MBI13_g01657_MAGBIO Magnolia biondii HOM05D005942 ORTHO05D007209 4.1e-182 642.5 761 48.5
FAN09G3780 Fragaria x ananassa HOM05D005942 ORTHO05D007209 5.4e-182 642.1 714 50.6
C06p46680 Brassica napus HOM05D005942 ORTHO05D007209 7.0e-182 641.7 724 48.1
vmacro18719 Vaccinium macrocarpon HOM05D005942 ORTHO05D007209 2.9e-180 636.3 677 52.1
BraA07t31410Z Brassica rapa HOM05D005942 ORTHO05D007209 5.0e-180 635.6 722 47.8
arahy.Tifrunner.gnm1.ann1.SXV5N5 Arachis hypogaea HOM05D005942 ORTHO05D007209 4.0e-177 625.9 662 49.2
Manes.04G151100 Manihot esculenta HOM05D005942 ORTHO05D007209 4.4e-176 622.5 696 49.6
Psat6g168240 Pisum sativum HOM05D005942 ORTHO05D007209 7.5e-176 621.7 675 49.3
Ca_07883_v3 Cicer arietinum L. HOM05D005942 ORTHO05D007209 3.7e-175 619.4 686 49.0
BcaB03g14980 Brassica carinata HOM05D005942 ORTHO05D007209 6.4e-175 618.6 705 48.8
Nitab4.5_0001873g0040 Nicotiana tabacum HOM05D005942 ORTHO05D007209 6.0e-173 612.1 697 50.8
CDE04G3550 Ceratophyllum demersum HOM05D005942 ORTHO05D007209 4.9e-167 592.4 727 46.5
Cfa003459 Carpinus fangiana HOM05D005942 ORTHO05D007209 1.6e-165 587.4 1093 36.4
ATR0099G013 Amborella trichopoda HOM05D005942 ORTHO05D007209 3.5e-165 586.3 683 47.3
Sc12g0011030 Simmondsia chinensis HOM05D005942 ORTHO05D007209 9.5e-163 578.2 606 51.7
FAN05G1996 Fragaria x ananassa HOM05D005942 ORTHO05D007209 4.4e-160 569.3 613 50.4
Nitab4.5_0007678g0030 Nicotiana tabacum HOM05D005942 ORTHO05D007209 8.6e-156 555.1 684 48.0
HPP92_016652 Vanilla planifolia HOM05D005942 ORTHO05D007209 3.1e-153 546.6 639 46.8
Zm00001eb028000 Zea mays HOM05D005942 ORTHO05D007209 4.3e-147 526.2 704 42.3
AUR62043501 Chenopodium quinoa HOM05D005942 ORTHO05D007209 6.0e-141 505.8 482 54.1
unitig_62.g23675 Utricularia gibba HOM05D005942 ORTHO05D007209 1.0e-132 478.4 733 42.7
Actinidia24424 Actinidia chinensis HOM05D005942 ORTHO05D007209 2.5e-115 420.6 373 60.3
AagrBONN_evm.TU.Sc2ySwM_369.233 Anthoceros agrestis HOM05D005942 ORTHO05D007209 8.8e-100 369.0 577 36.7
Mapoly0020s0016 Marchantia polymorpha HOM05D005942 ORTHO05D007209 2.0e-99 367.9 572 36.9
arahy.Tifrunner.gnm1.ann1.UMP4HF Arachis hypogaea HOM05D005942 ORTHO05D007209 5.3e-97 359.8 380 50.3
CAN.G635.25 Capsicum annuum HOM05D005942 ORTHO05D007209 2.6e-96 357.5 545 41.3
Pp3c10_6430 Physcomitrium patens HOM05D005942 ORTHO05D007209 1.7e-95 354.8 635 34.6
Cpa.g.sc25.196 Carica papaya HOM05D005942 ORTHO05D007209 9.7e-91 339.0 312 55.4
Nitab4.5_0001873g0030 Nicotiana tabacum HOM05D005942 ORTHO05D007209 1.5e-86 325.1 679 35.6
HPP92_016646 Vanilla planifolia HOM05D005942 ORTHO05D007209 1.0e-79 302.4 343 47.8
SMO118G0133 Selaginella moellendorffii HOM05D005942 ORTHO05D007209 1.2e-75 288.9 579 32.8
Cpa.g.sc25.195 Carica papaya HOM05D005942 ORTHO05D007209 1.1e-65 255.8 259 52.1
SGA_v2.0_scaffold253G45152 Striga asiatica HOM05D005942 ORTHO05D007209 5.2e-60 236.9 157 82.2
MCO05G275 Micromonas commoda HOM05D005942 ORTHO05D007209 4.9e-58 230.3 586 29.2
HPP92_016647 Vanilla planifolia HOM05D005942 ORTHO05D007209 7.8e-48 196.4 274 40.1
Cre16.g649600 Chlamydomonas reinhardtii HOM05D005942 ORTHO05D007209 1.4e-44 185.7 675 25.3
CAN.G635.26 Capsicum annuum HOM05D005942 ORTHO05D007209 3.6e-37 161.0 184 49.5
CBR_g4864 Chara braunii HOM05D005942 ORTHO05D007209 2.6e-35 154.8 745 23.4
PRCOL_00005763 Prasinoderma coloniale HOM05D005942 ORTHO05D007209 3.6e-29 134.4 467 26.3
Actinidia21840 Actinidia chinensis HOM05D005942 ORTHO05D007209 6.2e-29 133.7 167 46.1
Sabra01G0130200 Salix brachista HOM05D005942 ORTHO05D007209 6.9e-28 130.2 639 24.3
SEGI_33476 Sequoiadendron giganteum HOM05D005942 ORTHO05D007209 2.9e-26 124.8 207 35.3
SEGI_14143 Sequoiadendron giganteum HOM05D005942 ORTHO05D007209 1.9e-22 112.1 147 45.6
Actinidia21839 Actinidia chinensis HOM05D005942 ORTHO05D007209 2.1e-16 92.0 150 40.7
Glyma.19G262250 Glycine max HOM05D005942 ORTHO05D007209 2.7e-16 91.7 127 39.4
CBR_g19531 Chara braunii HOM05D005942 ORTHO05D007209 6.7e-15 87.0 529 20.0
C02p29840 Brassica napus HOM05D005942 ORTHO05D007209 6.2e-13 80.5 74 51.4
BolC2t09032H Brassica oleracea HOM05D005942 ORTHO05D007209 8.1e-13 80.1 86 47.7
Haze_02542 Corylus avellana HOM05D005942 ORTHO05D007209 4.5e-11 74.3 96 43.8
MBI15_g00935_MAGBIO Magnolia biondii HOM05D001716 ORTHO05D016670 4.2e-09 67.8 87 42.5
SEGI_28404 Sequoiadendron giganteum HOM05D005942 ORTHO05D007209 1.2e-08 66.2 72 45.8
Psat3g111360 Pisum sativum HOM05D001026 ORTHO05D005232 3.9e-07 61.2 53 50.9


User provided reference genes

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