Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold114G31872 Striga asiatica HOM05D005494 ORTHO05D006689 3.3e-62 241.5 118 100.0
SGA_v2.0_scaffold7G04099 Striga asiatica HOM05D005494 ORTHO05D006689 3.6e-37 158.3 93 83.9
MSTRG.9655 Avicennia marina HOM05D005494 ORTHO05D006689 2.2e-34 149.1 93 76.3
Migut.N01938 Erythranthe guttata HOM05D005494 ORTHO05D006689 2.3e-31 139.0 86 74.4
Migut.D01889 Erythranthe guttata HOM05D005494 ORTHO05D006689 3.9e-31 138.3 93 71.0
Dinv13115 Davidia involucrata HOM05D005494 ORTHO05D006689 1.1e-30 136.7 95 67.4
Dinv07986 Davidia involucrata HOM05D005494 ORTHO05D006689 1.5e-30 136.3 95 67.4
vmacro19338 Vaccinium macrocarpon HOM05D005494 ORTHO05D006689 5.6e-30 134.4 95 67.4
Rhsim08G0163400 Rhododendron simsii HOM05D005494 ORTHO05D006689 1.6e-29 132.9 97 66.0
Actinidia04945 Actinidia chinensis HOM05D005494 ORTHO05D006689 2.8e-29 132.1 95 65.3
CSS0010415 Camellia sinensis var. sinensis HOM05D005494 ORTHO05D006689 2.8e-29 132.1 95 65.3
CSS0047784 Camellia sinensis var. sinensis HOM05D005494 ORTHO05D006689 2.8e-29 132.1 95 65.3
GSVIVG01008098001 Vitis vinifera HOM05D005494 ORTHO05D006689 6.2e-29 131.0 95 66.3
Cfa019036 Carpinus fangiana HOM05D005494 ORTHO05D006689 1.8e-28 129.4 95 64.2
Hma1.2p1_0572F.1_g181100 Hydrangea macrophylla HOM05D005494 ORTHO05D006689 5.2e-28 127.9 92 65.2
Haze_07413 Corylus avellana HOM05D005494 ORTHO05D006689 6.9e-28 127.5 95 63.2
CANSAT80G2452 Cannabis sativa HOM05D005494 ORTHO05D006689 8.9e-28 127.1 95 63.2
Nitab4.5_0000642g0180 Nicotiana tabacum HOM05D005494 ORTHO05D006689 2.6e-27 125.6 93 65.6
Peaxi162Scf00017g02118 Petunia axillaris HOM05D005494 ORTHO05D006689 3.4e-27 125.2 93 65.6
Potri.012G073500 Populus trichocarpa HOM05D005494 ORTHO05D006689 3.4e-27 125.2 95 61.1
CAN.G999.3 Capsicum annuum HOM05D005494 ORTHO05D006689 4.4e-27 124.8 93 67.7
Solyc03g113610.4 Solanum lycopersicum HOM05D005494 ORTHO05D006689 4.4e-27 124.8 93 65.6
Sopen03g032650 Solanum pennellii HOM05D005494 ORTHO05D006689 4.4e-27 124.8 93 65.6
PGSC0003DMG400024571 Solanum tuberosum HOM05D005494 ORTHO05D006689 4.4e-27 124.8 93 65.6
QL10p014050 Quercus lobata HOM05D005494 ORTHO05D006689 5.8e-27 124.4 95 61.1
Nitab4.5_0009486g0030 Nicotiana tabacum HOM05D005494 ORTHO05D006689 9.9e-27 123.6 93 64.5
Manes.14G072100 Manihot esculenta HOM05D005494 ORTHO05D006689 1.7e-26 122.9 95 61.1
Oeu038310.1 Olea europaea HOM05D005494 ORTHO05D006689 2.2e-26 122.5 92 63.0
Lj5C118G23 Lonicera japonica HOM05D005494 ORTHO05D006689 2.9e-26 122.1 95 62.1
ClCG01G014230 Citrullus lanatus HOM05D005494 ORTHO05D006689 4.9e-26 121.3 95 57.9
CiPaw.11G034500 Carya illinoinensis HOM05D005494 ORTHO05D006689 6.4e-26 120.9 93 62.4
DCAR_026093 Daucus carota HOM05D005494 ORTHO05D006689 6.4e-26 120.9 86 67.4
Lalb_Chr07g0182431 Lupinus albus HOM05D005494 ORTHO05D006689 6.4e-26 120.9 89 61.8
Sabra12G0052300 Salix brachista HOM05D005494 ORTHO05D006689 6.4e-26 120.9 95 60.0
Prupe.5G182300 Prunus persica HOM05D005494 ORTHO05D006689 1.1e-25 120.2 95 60.0
Duzib084G0032 Durio zibethinus HOM05D005494 ORTHO05D006689 1.4e-25 119.8 92 59.8
MELO3C002226.2 Cucumis melo HOM05D005494 ORTHO05D006689 1.9e-25 119.4 95 56.8
MD14G1057100 Malus domestica HOM05D005494 ORTHO05D006689 4.2e-25 118.2 95 60.0
RcHm_v2.0_Chr7g0180051 Rosa chinensis HOM05D005494 ORTHO05D006689 4.2e-25 118.2 95 58.9
Ciclev10020622m.g Citrus clementina HOM05D005494 ORTHO05D006689 7.1e-25 117.5 94 60.6
COL.COLO4_07634 Corchorus olitorius HOM05D005494 ORTHO05D006689 9.3e-25 117.1 95 60.0
CsaV3_1G008090 Cucumis sativus L. HOM05D005494 ORTHO05D006689 9.3e-25 117.1 95 55.8
FAN13G0712 Fragaria x ananassa HOM05D005494 ORTHO05D006689 1.6e-24 116.3 95 57.9
Cpa.g.sc30.67 Carica papaya HOM05D005494 ORTHO05D006689 2.1e-24 115.9 90 57.8
Lsat_1_v5_gn_5_17360 Lactuca sativa HOM05D005494 ORTHO05D006689 2.1e-24 115.9 83 61.4
Eucgr.B00382 Eucalyptus grandis HOM05D005494 ORTHO05D006689 2.7e-24 115.5 94 58.5
Gohir.A12G174400 Gossypium hirsutum HOM05D005494 ORTHO05D006689 2.7e-24 115.5 95 58.9
Gohir.D12G177100 Gossypium hirsutum HOM05D005494 ORTHO05D006689 2.7e-24 115.5 95 58.9
Gorai.008G189500 Gossypium raimondii HOM05D005494 ORTHO05D006689 2.7e-24 115.5 95 58.9
TWI09G1329 Tripterygium wilfordii HOM05D005494 ORTHO05D006689 6.0e-24 114.4 95 57.9
FvH4_5g16020 Fragaria vesca HOM05D005494 ORTHO05D006689 7.8e-24 114.0 95 56.8
FAN04G1682 Fragaria x ananassa HOM05D005494 ORTHO05D006689 7.8e-24 114.0 95 56.8
FAN18G0952 Fragaria x ananassa HOM05D005494 ORTHO05D006689 7.8e-24 114.0 95 56.8
Atru.chr3.1308 Acer truncatum HOM05D005494 ORTHO05D006689 1.0e-23 113.6 81 65.4
TAR629G2056 Trochodendron aralioides HOM05D005494 ORTHO05D006689 1.0e-23 113.6 92 58.7
Sed0009281 Sechium edule HOM05D005494 ORTHO05D006689 1.7e-23 112.8 95 55.8
Lsat_1_v5_gn_1_11340 Lactuca sativa HOM05D005494 ORTHO05D006689 2.3e-23 112.5 82 61.0
TAR622G0530 Trochodendron aralioides HOM05D005494 ORTHO05D006689 3.0e-23 112.1 93 57.0
Aa31LG3G16120 Aethionema arabicum HOM05D005494 ORTHO05D006689 5.1e-23 111.3 89 62.9
Thecc.10G120900 Theobroma cacao HOM05D005494 ORTHO05D006689 5.1e-23 111.3 88 60.2
AT5G11010 Arabidopsis thaliana HOM05D005494 ORTHO05D006689 6.6e-23 110.9 87 62.1
Carub.0006s0951 Capsella rubella HOM05D005494 ORTHO05D006689 6.6e-23 110.9 87 62.1
Nn3g17064 Nelumbo nucifera HOM05D005494 ORTHO05D006689 6.6e-23 110.9 91 57.1
AL6G21610 Arabidopsis lyrata HOM05D005494 ORTHO05D006689 8.7e-23 110.5 87 62.1
MD14G1189700 Malus domestica HOM05D005494 ORTHO05D006689 8.7e-23 110.5 92 56.5
CARHR202280 Cardamine hirsuta HOM05D005494 ORTHO05D006689 1.1e-22 110.2 87 62.1
Sp6g32480 Schrenkiella parvula HOM05D005494 ORTHO05D006689 1.1e-22 110.2 87 62.1
TPR.G17080 Trifolium pratense HOM05D005494 ORTHO05D006689 1.1e-22 110.2 90 55.6
Hund09389 Selenicereus undatus HOM05D005494 ORTHO05D006689 1.9e-22 109.4 84 61.9
THA.LOC104818279 Tarenaya hassleriana HOM05D005494 ORTHO05D006689 1.9e-22 109.4 87 62.1
Aqoxy3G03184 Aquilegia oxysepala HOM05D005494 ORTHO05D006689 4.3e-22 108.2 92 57.6
THA.LOC104814121 Tarenaya hassleriana HOM05D005494 ORTHO05D006689 4.3e-22 108.2 90 60.0
Psat7g041440 Pisum sativum HOM05D005494 ORTHO05D006689 5.6e-22 107.8 85 61.2
C09p65840 Brassica napus HOM05D005494 ORTHO05D006689 7.3e-22 107.5 84 59.5
Lalb_Chr08g0236101 Lupinus albus HOM05D005494 ORTHO05D006689 7.3e-22 107.5 91 57.1
arahy.Tifrunner.gnm1.ann1.QI1X69 Arachis hypogaea HOM05D005494 ORTHO05D006689 9.6e-22 107.1 89 58.4
arahy.Tifrunner.gnm1.ann1.Y2W2NU Arachis hypogaea HOM05D005494 ORTHO05D006689 9.6e-22 107.1 89 58.4
PSO591G0251 Papaver somniferum HOM05D005494 ORTHO05D006689 9.6e-22 107.1 92 59.8
A10p26670 Brassica napus HOM05D005494 ORTHO05D006689 2.1e-21 105.9 84 59.5
Glyma.05G004700 Glycine max HOM05D005494 ORTHO05D006689 2.1e-21 105.9 87 55.2
PSO832G2211 Papaver somniferum HOM05D005494 ORTHO05D006689 2.1e-21 105.9 92 59.8
Phvul.004G010600 Phaseolus vulgaris HOM05D005494 ORTHO05D006689 2.8e-21 105.5 78 59.0
EL10Ac5g10874 Beta vulgaris HOM05D005494 ORTHO05D006689 4.8e-21 104.8 84 58.3
Aa31LG10G14040 Aethionema arabicum HOM05D005494 ORTHO05D006689 6.2e-21 104.4 90 60.0
Thhalv10000203m.g Eutrema salsugineum HOM05D005494 ORTHO05D006689 8.1e-21 104.0 87 58.6
GSVIVG01008101001 Vitis vinifera HOM05D005494 ORTHO05D006689 1.8e-20 102.8 73 65.8
Ca_18065_v3 Cicer arietinum L. HOM05D005494 ORTHO05D006689 2.4e-20 102.4 85 60.0
ECA247G2071 Erigeron canadensis HOM05D005494 ORTHO05D006689 2.4e-20 102.4 85 58.8
Glyma.04G177200 Glycine max HOM05D005494 ORTHO05D006689 2.4e-20 102.4 87 51.7
BcaC04g19267 Brassica carinata HOM05D005494 ORTHO05D006689 4.0e-20 101.7 84 59.5
HanXRQChr02g0045331 Helianthus annuus HOM05D005494 ORTHO05D006689 6.9e-20 100.9 74 62.2
HanXRQChr16g0516751 Helianthus annuus HOM05D005494 ORTHO05D006689 9.0e-20 100.5 90 56.7
AUR62022932 Chenopodium quinoa HOM05D005494 ORTHO05D006689 2.0e-19 99.4 84 57.1
SHI07761 Sapria himalayana HOM05D005494 ORTHO05D006689 3.4e-19 98.6 91 53.8
VMungo0464G1007 Vigna mungo HOM05D005494 ORTHO05D006689 4.5e-19 98.2 78 55.1
AUR62012293 Chenopodium quinoa HOM05D005494 ORTHO05D006689 7.6e-19 97.4 84 56.0
HPP92_006463 Vanilla planifolia HOM05D005494 ORTHO05D006689 7.6e-19 97.4 81 58.0
AUR62021784 Chenopodium quinoa HOM05D005494 ORTHO05D006689 9.9e-19 97.1 93 54.8
Medtr8g080150 Medicago truncatula HOM05D005494 ORTHO05D006689 1.3e-18 96.7 83 55.4
Lj1g0011553 Lotus japonicus HOM05D005494 ORTHO05D006689 2.2e-18 95.9 85 55.3
Medtr8g080140 Medicago truncatula HOM05D005494 ORTHO05D006689 2.2e-18 95.9 89 53.9
AUR62008313 Chenopodium quinoa HOM05D005494 ORTHO05D006689 3.8e-18 95.1 91 53.8
Psat7g079600 Pisum sativum HOM05D005494 ORTHO05D006689 3.8e-18 95.1 85 51.8
Os01g0354700 Oryza sativa ssp. japonica HOM05D005494 ORTHO05D006689 1.1e-17 93.6 73 56.2
HPP92_008786 Vanilla planifolia HOM05D005494 ORTHO05D006689 9.3e-17 90.5 75 56.0
Pp3c4_400 Physcomitrium patens HOM05D005494 ORTHO05D006689 1.2e-16 90.1 76 56.6
Zm00001eb121920 Zea mays HOM05D005494 ORTHO05D006689 1.2e-16 90.1 86 48.8
SEGI_00948 Sequoiadendron giganteum HOM05D005494 ORTHO05D006689 3.5e-16 88.6 92 47.8
BraA10t44725Z Brassica rapa HOM05D005494 ORTHO05D006689 4.6e-16 88.2 56 71.4
AagrBONN_evm.TU.Sc2ySwM_344.720 Anthoceros agrestis HOM05D005494 ORTHO05D006689 1.9e-14 82.8 86 46.5
Glyma.06G187800 Glycine max HOM05D005494 ORTHO05D006689 2.5e-14 82.4 57 61.4
Mapoly0002s0051 Marchantia polymorpha HOM05D005494 ORTHO05D006689 1.6e-13 79.7 86 47.7
Os01g0184000 Oryza sativa ssp. japonica HOM05D005494 ORTHO05D006689 2.4e-12 75.9 84 45.2
CBR_g8796 Chara braunii HOM05D000019 ORTHO05D000048 4.0e-12 75.1 91 46.2
MD06G1183600 Malus domestica HOM05D005494 ORTHO05D006689 4.0e-12 75.1 79 48.1
Lj4g0024662 Lotus japonicus HOM05D005494 ORTHO05D006689 2.2e-10 69.3 85 45.9
Phvul.009G054050 Phaseolus vulgaris HOM05D005494 ORTHO05D006689 2.4e-09 65.9 58 50.0
Cc04_g16070 Coffea canephora HOM05D005494 ORTHO05D006689 6.0e-08 61.2 38 76.3
Thhalv10015920m.g Eutrema salsugineum HOM05D005494 ORTHO05D006689 6.0e-08 61.2 72 44.4
Dinv32660 Davidia involucrata HOM05D005494 ORTHO05D006689 1.0e-07 60.5 42 64.3
Oeu039559.2 Olea europaea HOM05D005494 ORTHO05D006689 3.0e-07 58.9 35 77.1
unitig_8.g3614 Utricularia gibba HOM05D005494 ORTHO05D006689 8.7e-07 57.4 32 81.2
Cre03.g168350 Chlamydomonas reinhardtii HOM05D005494 ORTHO05D006689 1.1e-06 57.0 77 42.9


User provided reference genes

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