Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold110G31316 Striga asiatica HOM05D007322 ORTHO05D009029 1.7e-238 829.7 719 100.0
Migut.B00834 Erythranthe guttata HOM05D007322 ORTHO05D009029 3.4e-122 443.4 713 65.9
MSTRG.20302 Avicennia marina HOM05D007322 ORTHO05D009029 7.9e-111 405.6 710 72.5
Dinv24285 Davidia involucrata HOM05D007322 ORTHO05D009029 3.7e-100 370.2 722 58.3
CSS0017191 Camellia sinensis var. sinensis HOM05D007322 ORTHO05D009029 2.4e-99 367.5 720 58.1
GSVIVG01022920001 Vitis vinifera HOM05D007322 ORTHO05D009029 2.7e-95 354.0 706 61.3
Hma1.2p1_0217F.1_g092060 Hydrangea macrophylla HOM05D007322 ORTHO05D009029 3.0e-94 350.5 652 60.9
TWI14G1121 Tripterygium wilfordii HOM05D007322 ORTHO05D009029 5.7e-93 346.3 690 61.2
Potri.003G019000 Populus trichocarpa HOM05D007322 ORTHO05D009029 2.8e-92 344.0 601 65.9
Cc02_g22530 Coffea canephora HOM05D007322 ORTHO05D009029 4.1e-91 340.1 721 60.7
Sed0025924 Sechium edule HOM05D007322 ORTHO05D009029 9.1e-91 339.0 594 67.7
RcHm_v2.0_Chr7g0222211 Rosa chinensis HOM05D007322 ORTHO05D009029 2.0e-90 337.8 656 61.7
CiPaw.05G044700 Carya illinoinensis HOM05D007322 ORTHO05D009029 3.8e-89 333.6 562 70.6
TAR381G0036 Trochodendron aralioides HOM05D007322 ORTHO05D009029 3.8e-89 333.6 697 64.4
Prupe.1G569600 Prunus persica HOM05D007322 ORTHO05D009029 7.2e-88 329.3 723 58.2
Sabra03G0010600 Salix brachista HOM05D007322 ORTHO05D009029 2.7e-87 327.4 581 67.0
FvH4_5g29340 Fragaria vesca HOM05D007322 ORTHO05D009029 1.0e-86 325.5 650 62.5
Aqoxy6G00206 Aquilegia oxysepala HOM05D007322 ORTHO05D009029 1.4e-86 325.1 568 70.8
CAN.G1021.1 Capsicum annuum HOM05D007322 ORTHO05D009029 1.4e-86 325.1 590 67.8
Duzib132G0092 Durio zibethinus HOM05D007322 ORTHO05D009029 1.4e-86 325.1 579 64.1
Rhsim01G0008000 Rhododendron simsii HOM05D007322 ORTHO05D009029 1.4e-86 325.1 706 59.2
MD15G1423900 Malus domestica HOM05D007322 ORTHO05D009029 2.3e-86 324.3 713 56.9
Nn5g28260 Nelumbo nucifera HOM05D007322 ORTHO05D009029 4.0e-86 323.6 578 75.3
FAN18G2556 Fragaria x ananassa HOM05D007322 ORTHO05D009029 8.8e-86 322.4 650 62.6
CsaV3_3G043150 Cucumis sativus L. HOM05D007322 ORTHO05D009029 1.2e-85 322.0 581 65.7
MELO3C026617.2 Cucumis melo HOM05D007322 ORTHO05D009029 1.5e-85 321.6 583 65.7
Potri.001G211300 Populus trichocarpa HOM05D007322 ORTHO05D009029 4.4e-85 320.1 568 66.0
Ciclev10000525m.g Citrus clementina HOM05D007322 ORTHO05D009029 2.8e-84 317.4 573 68.8
Lsat_1_v5_gn_5_105200 Lactuca sativa HOM05D007322 ORTHO05D009029 3.7e-84 317.0 693 58.3
BraA06t23970Z Brassica rapa HOM05D007322 ORTHO05D009029 3.1e-83 313.9 562 61.9
Cfa005519 Carpinus fangiana HOM05D007322 ORTHO05D009029 3.1e-83 313.9 641 62.6
C05p09280 Brassica napus HOM05D007322 ORTHO05D009029 9.2e-83 312.4 562 63.7
Solyc11g040260.2 Solanum lycopersicum HOM05D007322 ORTHO05D009029 9.2e-83 312.4 637 68.9
Sopen11g018100 Solanum pennellii HOM05D007322 ORTHO05D009029 1.2e-82 312.0 637 68.9
A06p07690 Brassica napus HOM05D007322 ORTHO05D009029 1.6e-82 311.6 562 63.5
Gohir.A03G193600 Gossypium hirsutum HOM05D007322 ORTHO05D009029 1.6e-82 311.6 574 66.6
Thhalv10007006m.g Eutrema salsugineum HOM05D007322 ORTHO05D009029 2.7e-82 310.8 560 64.6
Gohir.D02G214700 Gossypium hirsutum HOM05D007322 ORTHO05D009029 2.7e-82 310.8 571 66.4
Lj6g0009763 Lotus japonicus HOM05D007322 ORTHO05D009029 2.7e-82 310.8 636 58.8
BcaNung04765 Brassica carinata HOM05D007322 ORTHO05D009029 3.5e-82 310.5 562 61.7
THA.LOC104816934 Tarenaya hassleriana HOM05D007322 ORTHO05D009029 4.5e-82 310.1 568 64.4
CARHR011130 Cardamine hirsuta HOM05D007322 ORTHO05D009029 5.9e-82 309.7 560 65.2
Gorai.005G242500 Gossypium raimondii HOM05D007322 ORTHO05D009029 7.7e-82 309.3 571 66.7
BcaC05g24974 Brassica carinata HOM05D007322 ORTHO05D009029 1.3e-81 308.5 562 61.6
Thecc.02G087000 Theobroma cacao HOM05D007322 ORTHO05D009029 1.7e-81 308.1 713 59.9
BolC5t29668H Brassica oleracea HOM05D007322 ORTHO05D009029 6.6e-81 306.2 562 63.5
Sp1g09630 Schrenkiella parvula HOM05D007322 ORTHO05D009029 8.6e-81 305.8 560 61.2
Carub.0001s1049 Capsella rubella HOM05D007322 ORTHO05D009029 2.5e-80 304.3 581 64.4
COL.COLO4_11791 Corchorus olitorius HOM05D007322 ORTHO05D009029 3.3e-80 303.9 578 65.6
Medtr2g007030 Medicago truncatula HOM05D007322 ORTHO05D009029 3.3e-80 303.9 564 65.6
AT1G10910 Arabidopsis thaliana HOM05D007322 ORTHO05D009029 1.2e-79 302.0 682 56.6
QL10p025368 Quercus lobata HOM05D007322 ORTHO05D009029 4.7e-79 300.1 665 43.5
Glyma.08G186600 Glycine max HOM05D007322 ORTHO05D009029 6.1e-79 299.7 671 55.4
Manes.07G016500 Manihot esculenta HOM05D007322 ORTHO05D009029 3.0e-78 297.4 533 68.5
PGR042G2216 Punica granatum HOM05D007322 ORTHO05D009029 4.0e-78 297.0 570 64.0
HanXRQChr10g0290611 Helianthus annuus HOM05D007322 ORTHO05D009029 1.2e-77 295.4 656 56.7
Psat1g220200 Pisum sativum HOM05D007322 ORTHO05D009029 2.0e-77 294.7 570 63.5
Lalb_Chr20g0123451 Lupinus albus HOM05D007322 ORTHO05D009029 2.6e-77 294.3 572 67.3
MBI04_g34119_MAGBIO Magnolia biondii HOM05D007322 ORTHO05D009029 4.9e-76 290.0 560 67.1
Atru.chr6.627 Acer truncatum HOM05D007322 ORTHO05D009029 5.4e-75 286.6 532 66.5
TPR.G2112 Trifolium pratense HOM05D007322 ORTHO05D009029 4.6e-74 283.5 566 67.8
arahy.Tifrunner.gnm1.ann1.YY4I9I Arachis hypogaea HOM05D007322 ORTHO05D009029 2.3e-73 281.2 570 66.1
vmacro19889 Vaccinium macrocarpon HOM05D007322 ORTHO05D009029 6.6e-73 279.6 576 64.8
ATR0026G013 Amborella trichopoda HOM05D007322 ORTHO05D009029 2.1e-71 274.6 637 64.1
arahy.Tifrunner.gnm1.ann1.BYDN2S Arachis hypogaea HOM05D007322 ORTHO05D009029 1.0e-70 272.3 570 66.0
EL10Ac6g14069 Beta vulgaris HOM05D007322 ORTHO05D009029 2.3e-70 271.2 559 64.0
Aa31LG1G3950 Aethionema arabicum HOM05D007322 ORTHO05D009029 1.2e-69 268.9 560 64.8
AL1G21890 Arabidopsis lyrata HOM05D007322 ORTHO05D009029 1.5e-69 268.5 524 66.2
Os01g0559500 Oryza sativa ssp. japonica HOM05D007322 ORTHO05D009029 5.8e-69 266.5 556 70.7
Lj9C305T7 Lonicera japonica HOM05D007322 ORTHO05D009029 7.5e-69 266.2 703 47.7
Phvul.006G214900 Phaseolus vulgaris HOM05D007322 ORTHO05D009029 2.0e-66 258.1 544 66.2
Zm00001eb162220 Zea mays HOM05D007322 ORTHO05D009029 5.0e-65 253.4 556 69.4
Haze_01685 Corylus avellana HOM05D007322 ORTHO05D009029 4.3e-64 250.4 172 71.5
VMungo0540G0689 Vigna mungo HOM05D007322 ORTHO05D009029 9.5e-64 249.2 531 69.5
HPP92_009152 Vanilla planifolia HOM05D007322 ORTHO05D009029 8.1e-63 246.1 554 56.1
Peaxi162Scf00152g01437 Petunia axillaris HOM05D007322 ORTHO05D009029 4.0e-62 243.8 176 67.0
ClCG10G013500 Citrullus lanatus HOM05D007322 ORTHO05D009029 4.4e-61 240.4 178 69.1
Nitab4.5_0003788g0020 Nicotiana tabacum HOM05D007322 ORTHO05D009029 6.4e-60 236.5 175 66.3
DCAR_025358 Daucus carota HOM05D007322 ORTHO05D009029 2.4e-59 234.6 178 64.0
FAN08G0261 Fragaria x ananassa HOM05D007322 ORTHO05D009029 4.1e-59 233.8 173 67.1
Ah.03g137110 Amaranthus hybridus HOM05D007322 ORTHO05D009029 3.9e-57 227.3 573 62.7
Eucgr.G00576 Eucalyptus grandis HOM05D007322 ORTHO05D009029 8.6e-57 226.1 179 63.7
Nitab4.5_0000001g0160 Nicotiana tabacum HOM05D007322 ORTHO05D009029 1.9e-56 224.9 197 59.4
Hund12986 Selenicereus undatus HOM05D007322 ORTHO05D009029 9.5e-56 222.6 542 38.4
Oeu008898.1 Olea europaea HOM05D007322 ORTHO05D009029 2.3e-54 218.0 317 51.1
Sc06g0002720 Simmondsia chinensis HOM05D007322 ORTHO05D009029 8.6e-49 199.5 163 59.5
FAN04G1727 Fragaria x ananassa HOM05D001260 ORTHO05D002424 1.3e-41 175.6 286 48.3
ECA234G4037 Erigeron canadensis HOM05D007322 ORTHO05D009029 1.2e-37 162.5 534 61.4
CDE05G1655 Ceratophyllum demersum HOM05D007322 ORTHO05D009029 2.6e-37 161.4 211 41.2
Nitab4.5_0000001g0170 Nicotiana tabacum HOM05D007322 ORTHO05D009029 3.8e-36 157.5 171 63.2
Cpa.g.sc113.59 Carica papaya HOM05D007322 ORTHO05D009029 3.2e-35 154.5 108 66.7
DCAR_025359 Daucus carota HOM05D007322 ORTHO05D009029 8.1e-31 139.8 138 72.5
Nitab4.5_0003788g0010 Nicotiana tabacum HOM05D007322 ORTHO05D009029 4.0e-30 137.5 142 68.3
Peaxi162Scf00152g01436 Petunia axillaris HOM05D007322 ORTHO05D009029 8.7e-25 119.8 281 33.5
Haze_01695 Corylus avellana HOM05D004517 ORTHO05D005366 9.0e-22 109.8 103 61.2
Cpa.g.c42393 Carica papaya HOM05D007322 ORTHO05D009029 3.0e-17 94.7 104 48.1
PGSC0003DMG400008423 Solanum tuberosum HOM05D007322 ORTHO05D009029 8.7e-17 93.2 71 62.0
Actinidia26149 Actinidia chinensis HOM05D007322 ORTHO05D009029 2.0e-13 82.0 102 66.7
Pp3c24_4430 Physcomitrium patens HOM05D007322 ORTHO05D009029 2.1e-10 72.0 91 37.4
Oeu027802.1 Olea europaea HOM05D007322 ORTHO05D009029 3.0e-09 68.2 41 68.3
Pp3c22_3230 Physcomitrium patens HOM05D003056 ORTHO05D003422 1.9e-08 65.5 118 28.8
AUR62021315 Chenopodium quinoa HOM05D003056 ORTHO05D003422 8.2e-07 60.1 119 27.7
AUR62033232 Chenopodium quinoa HOM05D003056 ORTHO05D003422 8.2e-07 60.1 119 29.4
Psat1g146880 Pisum sativum HOM05D003056 ORTHO05D003422 8.2e-07 60.1 121 28.1
Ca_02033_v3 Cicer arietinum L. HOM05D003056 ORTHO05D003422 1.1e-06 59.7 119 26.1
Pp3c4_14490 Physcomitrium patens HOM05D005862 ORTHO05D000003 1.1e-06 59.7 127 31.5
EL10Ac8g18299 Beta vulgaris HOM05D003056 ORTHO05D003422 1.8e-06 58.9 104 30.8
Ah.09g230000 Amaranthus hybridus HOM05D003056 ORTHO05D003422 6.9e-06 57.0 117 27.4
CsaV3_1G012210 Cucumis sativus L. HOM05D000300 ORTHO05D000383 6.9e-06 57.0 129 27.1


User provided reference genes

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