Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_40736 Sequoiadendron giganteum HOM05D004601 ORTHO05D005806 5.7e-47 191.0 134 100.0
THA.LOC104817773 Tarenaya hassleriana HOM05D004601 ORTHO05D005806 3.1e-24 115.5 78 65.4
Atru.chr7.956 Acer truncatum HOM05D004601 ORTHO05D005806 1.2e-23 113.6 78 64.1
vmacro05994 Vaccinium macrocarpon HOM05D004601 ORTHO05D005806 1.2e-23 113.6 78 61.5
TWI63G1718 Tripterygium wilfordii HOM05D004601 ORTHO05D005806 1.5e-23 113.2 78 65.4
Ca_02111_v3 Cicer arietinum L. HOM05D004601 ORTHO05D005806 3.4e-23 112.1 78 60.3
Medtr2g038030 Medicago truncatula HOM05D004601 ORTHO05D005806 3.4e-23 112.1 77 62.3
Cpa.g.sc95.10 Carica papaya HOM05D004601 ORTHO05D005806 4.4e-23 111.7 78 65.4
Gohir.D13G212700 Gossypium hirsutum HOM05D004601 ORTHO05D005806 7.5e-23 110.9 78 64.1
Gorai.013G243100 Gossypium raimondii HOM05D004601 ORTHO05D005806 7.5e-23 110.9 78 64.1
Thhalv10012474m.g Eutrema salsugineum HOM05D004601 ORTHO05D005806 9.8e-23 110.5 78 65.4
Lj6g0004756 Lotus japonicus HOM05D004601 ORTHO05D005806 9.8e-23 110.5 78 59.0
Sp6g18890 Schrenkiella parvula HOM05D004601 ORTHO05D005806 9.8e-23 110.5 78 65.4
BcaB08g35989 Brassica carinata HOM05D004601 ORTHO05D005806 1.3e-22 110.2 78 65.4
Gohir.A13G208300 Gossypium hirsutum HOM05D004601 ORTHO05D005806 1.3e-22 110.2 78 62.8
Actinidia02499 Actinidia chinensis HOM05D004601 ORTHO05D005806 2.2e-22 109.4 78 60.3
arahy.Tifrunner.gnm1.ann1.8TE3EA Arachis hypogaea HOM05D004601 ORTHO05D005806 2.9e-22 109.0 78 60.3
arahy.Tifrunner.gnm1.ann1.BQ8TF8 Arachis hypogaea HOM05D004601 ORTHO05D005806 2.9e-22 109.0 78 60.3
A10p14520 Brassica napus HOM05D004601 ORTHO05D005806 2.9e-22 109.0 78 64.1
BraA10t43541Z Brassica rapa HOM05D004601 ORTHO05D005806 2.9e-22 109.0 78 64.1
Carub.0008s1767 Capsella rubella HOM05D004601 ORTHO05D005806 2.9e-22 109.0 78 64.1
TPR.G7576 Trifolium pratense HOM05D004601 ORTHO05D000001 2.9e-22 109.0 78 59.0
COL.COLO4_06398 Corchorus olitorius HOM05D004601 ORTHO05D005806 3.7e-22 108.6 78 64.1
Migut.J00793 Erythranthe guttata HOM05D004601 ORTHO05D005806 3.7e-22 108.6 78 62.8
Lj7A622G14 Lonicera japonica HOM05D004601 ORTHO05D005806 3.7e-22 108.6 80 61.2
ATR0626G236 Amborella trichopoda HOM05D004601 ORTHO05D005806 4.9e-22 108.2 78 62.8
Aqoxy7G02847 Aquilegia oxysepala HOM05D004601 ORTHO05D005806 4.9e-22 108.2 78 62.8
Aa31LG3G13060 Aethionema arabicum HOM05D004601 ORTHO05D005806 6.4e-22 107.8 78 62.8
AL8G33090 Arabidopsis lyrata HOM05D004601 ORTHO05D005806 6.4e-22 107.8 78 62.8
Dinv25455 Davidia involucrata HOM05D004601 ORTHO05D005806 6.4e-22 107.8 78 60.3
Duzib150G1331 Durio zibethinus HOM05D004601 ORTHO05D005806 6.4e-22 107.8 78 62.8
Oeu019558.1 Olea europaea HOM05D004601 ORTHO05D005806 6.4e-22 107.8 78 60.3
PSO063G2966 Papaver somniferum HOM05D004601 ORTHO05D005806 6.4e-22 107.8 78 62.8
Rhsim03G0267200 Rhododendron simsii HOM05D004601 ORTHO05D005806 6.4e-22 107.8 78 59.0
Lalb_Chr08g0231931 Lupinus albus HOM05D004601 ORTHO05D005806 8.3e-22 107.5 78 57.7
Prupe.1G074600 Prunus persica HOM05D004601 ORTHO05D005806 8.3e-22 107.5 78 60.3
PGR142G4125 Punica granatum HOM05D004601 ORTHO05D005806 8.3e-22 107.5 78 59.0
Thecc.09G186600 Theobroma cacao HOM05D004601 ORTHO05D005806 8.3e-22 107.5 78 62.8
HPP92_021964 Vanilla planifolia HOM05D004601 ORTHO05D005806 8.3e-22 107.5 78 64.1
BcaC04g19995 Brassica carinata HOM05D004601 ORTHO05D005806 1.1e-21 107.1 78 64.1
C09p48970 Brassica napus HOM05D004601 ORTHO05D005806 1.1e-21 107.1 78 64.1
BolC9t57749H Brassica oleracea HOM05D004601 ORTHO05D005806 1.1e-21 107.1 78 64.1
CARHR270950 Cardamine hirsuta HOM05D004601 ORTHO05D005806 1.1e-21 107.1 78 62.8
Cc06_g20790 Coffea canephora HOM05D004601 ORTHO05D005806 1.1e-21 107.1 78 61.5
Hma1.2p1_0235F.1_g098680 Hydrangea macrophylla HOM05D004601 ORTHO05D005806 1.1e-21 107.1 78 62.8
AT5G57160 Arabidopsis thaliana HOM05D004601 ORTHO05D005806 1.4e-21 106.7 78 61.5
Cfa013456 Carpinus fangiana HOM05D004601 ORTHO05D005806 1.4e-21 106.7 80 63.8
PSO170G3696 Papaver somniferum HOM05D004601 ORTHO05D005806 1.9e-21 106.3 78 62.8
Zm00001eb071490 Zea mays HOM05D004601 ORTHO05D005806 1.9e-21 106.3 76 64.5
Nn8g40736 Nelumbo nucifera HOM05D004601 ORTHO05D005806 2.4e-21 105.9 78 61.5
CiPaw.08G032200 Carya illinoinensis HOM05D004601 ORTHO05D005806 3.2e-21 105.5 80 61.2
Peaxi162Scf00231g01116 Petunia axillaris HOM05D004601 ORTHO05D005806 3.2e-21 105.5 78 61.5
PGR142G2375 Punica granatum HOM05D004601 ORTHO05D005806 4.1e-21 105.1 78 59.0
Solyc07g017990.3 Solanum lycopersicum HOM05D004601 ORTHO05D005806 4.1e-21 105.1 78 60.3
GSVIVG01029314001 Vitis vinifera HOM05D004601 ORTHO05D005806 4.1e-21 105.1 78 59.0
SGA_v2.0_scaffold112G31593 Striga asiatica HOM05D004601 ORTHO05D005806 5.4e-21 104.8 78 60.3
VMungo1309G1314 Vigna mungo HOM05D004601 ORTHO05D005806 5.4e-21 104.8 78 57.7
RcHm_v2.0_Chr4g0399311 Rosa chinensis HOM05D004601 ORTHO05D005806 7.1e-21 104.4 78 57.7
EL10Ac4g10170 Beta vulgaris HOM05D004601 ORTHO05D005806 9.2e-21 104.0 82 57.3
Ciclev10007283m.g Citrus clementina HOM05D004601 ORTHO05D005806 9.2e-21 104.0 77 62.3
TAR383G0412 Trochodendron aralioides HOM05D004601 ORTHO05D005806 9.2e-21 104.0 78 62.8
Lsat_1_v5_gn_8_69120 Lactuca sativa HOM05D004601 ORTHO05D005806 1.2e-20 103.6 77 61.0
CSS0021444 Camellia sinensis var. sinensis HOM05D004601 ORTHO05D005806 1.6e-20 103.2 78 59.0
DCAR_020147 Daucus carota HOM05D004601 ORTHO05D005806 1.6e-20 103.2 78 57.7
Sopen07g006920 Solanum pennellii HOM05D004601 ORTHO05D005806 1.6e-20 103.2 77 61.0
FAN12G1367 Fragaria x ananassa HOM05D004601 ORTHO05D005806 2.7e-20 102.4 78 57.7
Phvul.009G235800 Phaseolus vulgaris HOM05D004601 ORTHO05D005806 2.7e-20 102.4 78 55.1
HanXRQChr05g0141031 Helianthus annuus HOM05D004601 ORTHO05D005806 3.5e-20 102.1 78 59.0
MD16G1247900 Malus domestica HOM05D004601 ORTHO05D005806 6.0e-20 101.3 78 60.3
CAN.G285.4 Capsicum annuum HOM05D004601 ORTHO05D005806 7.8e-20 100.9 78 57.7
CDE07G0894 Ceratophyllum demersum HOM05D004601 ORTHO05D005806 7.8e-20 100.9 78 59.0
CANSAT11G0507 Cannabis sativa HOM05D004601 ORTHO05D005806 1.7e-19 99.8 78 60.3
Potri.018G141900 Populus trichocarpa HOM05D004601 ORTHO05D005806 1.7e-19 99.8 78 57.7
Sabra18G0116000 Salix brachista HOM05D004601 ORTHO05D005806 6.6e-19 97.8 78 57.7
CsaV3_2G008760 Cucumis sativus L. HOM05D004601 ORTHO05D005806 8.6e-19 97.4 78 57.7
ECA236G0938 Erigeron canadensis HOM05D004601 ORTHO05D005806 8.6e-19 97.4 78 56.4
MBI16_g47869_MAGBIO Magnolia biondii HOM05D004601 ORTHO05D005806 2.5e-18 95.9 71 59.2
MBI16_g10345_MAGBIO Magnolia biondii HOM05D004601 ORTHO05D005806 3.3e-18 95.5 76 56.6
Sc16g0011160 Simmondsia chinensis HOM05D004601 ORTHO05D005806 5.6e-18 94.7 77 54.5
MSTRG.5939 Avicennia marina HOM05D004601 ORTHO05D005806 7.3e-18 94.4 78 60.3
Ah.06g194430 Amaranthus hybridus HOM05D004601 ORTHO05D005806 1.6e-17 93.2 82 50.0
Manes.14G159112 Manihot esculenta HOM05D004601 ORTHO05D005806 1.6e-17 93.2 78 57.7
AagrBONN_evm.TU.Sc2ySwM_228.1820 Anthoceros agrestis HOM05D004601 ORTHO05D005806 3.1e-16 89.0 78 53.8
Sed0026596 Sechium edule HOM05D004601 ORTHO05D005806 8.9e-16 87.4 78 51.3
Mapoly0001s0137 Marchantia polymorpha HOM05D004601 ORTHO05D005806 1.2e-15 87.0 77 55.8
Pp3c14_5920 Physcomitrium patens HOM05D004601 ORTHO05D005806 9.9e-15 84.0 78 51.3
MELO3C003972.2 Cucumis melo HOM05D004601 ORTHO05D005806 1.7e-14 83.2 75 54.7
AUR62000175 Chenopodium quinoa HOM05D004601 ORTHO05D005806 2.9e-14 82.4 76 51.3
AUR62039835 Chenopodium quinoa HOM05D004601 ORTHO05D005806 8.4e-14 80.9 76 50.0
FvH4_4g07160 Fragaria vesca HOM05D004601 ORTHO05D005806 7.8e-12 74.3 61 52.5
Haze_22028 Corylus avellana HOM05D004601 ORTHO05D005806 2.3e-11 72.8 55 63.6
Aqoxy295s003 Aquilegia oxysepala HOM05D004601 ORTHO05D005806 3.0e-11 72.4 47 70.2
ClCG11G011730 Citrullus lanatus HOM05D004601 ORTHO05D005806 3.0e-11 72.4 47 68.1
Nitab4.5_0000056g0070 Nicotiana tabacum HOM05D004601 ORTHO05D005806 6.6e-11 71.2 54 59.3
SHI03064 Sapria himalayana HOM05D004601 ORTHO05D005806 2.1e-09 66.2 41 75.6
Sopen00g010200 Solanum pennellii HOM05D004601 ORTHO05D005806 2.8e-09 65.9 53 56.6
SMO144G0133 Selaginella moellendorffii HOM05D004601 ORTHO05D005806 8.1e-09 64.3 75 48.0


User provided reference genes

Program Settings