Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_40020 Sequoiadendron giganteum HOM05D004852 ORTHO05D006128 5.5e-184 647.5 332 100.0
Lj1g0003104 Lotus japonicus HOM05D004852 ORTHO05D006128 3.9e-28 129.8 207 36.7
Lalb_Chr09g0319571 Lupinus albus HOM05D004852 ORTHO05D006128 2.5e-27 127.1 194 36.6
MBI16_g23720_MAGBIO Magnolia biondii HOM05D004852 ORTHO05D006128 1.6e-26 124.4 305 31.1
Nn1g04670 Nelumbo nucifera HOM05D004852 ORTHO05D006128 2.1e-26 124.0 197 36.0
Aqoxy6G02842 Aquilegia oxysepala HOM05D004852 ORTHO05D006128 1.1e-25 121.7 324 30.2
TPR.G21613 Trifolium pratense HOM05D004852 ORTHO05D006128 1.1e-25 121.7 227 33.9
Medtr5g004960 Medicago truncatula HOM05D004852 ORTHO05D006128 1.8e-25 120.9 194 37.1
Dinv42201 Davidia involucrata HOM05D004852 ORTHO05D006128 5.3e-25 119.4 310 31.3
Cpa.g.sc106.104 Carica papaya HOM05D004852 ORTHO05D006128 1.2e-24 118.2 197 31.0
THA.LOC104812918 Tarenaya hassleriana HOM05D004852 ORTHO05D006128 4.4e-24 116.3 309 31.1
Glyma.01G243900 Glycine max HOM05D004852 ORTHO05D006128 7.6e-24 115.5 199 34.2
Psat4g228520 Pisum sativum HOM05D004852 ORTHO05D006128 9.9e-24 115.2 327 29.4
Manes.07G069666 Manihot esculenta HOM05D004852 ORTHO05D006128 3.8e-23 113.2 199 33.2
Sabra09G0072700 Salix brachista HOM05D004852 ORTHO05D006128 3.8e-23 113.2 205 33.2
TAR376G1059 Trochodendron aralioides HOM05D004852 ORTHO05D006128 4.9e-23 112.8 195 36.4
GSVIVG01037905001 Vitis vinifera HOM05D004852 ORTHO05D006128 6.4e-23 112.5 321 29.9
CiPaw.05G012900 Carya illinoinensis HOM05D004852 ORTHO05D006128 1.4e-22 111.3 200 33.0
Zm00001eb226110 Zea mays HOM05D004852 ORTHO05D006128 1.4e-22 111.3 268 29.9
Ca_24346_v3 Cicer arietinum L. HOM05D004852 ORTHO05D006128 1.9e-22 110.9 180 37.2
FvH4_2g04972 Fragaria vesca HOM05D004852 ORTHO05D006128 1.9e-22 110.9 314 26.8
arahy.Tifrunner.gnm1.ann1.9X93LG Arachis hypogaea HOM05D004852 ORTHO05D006128 4.2e-22 109.8 226 31.4
PGR142G1976 Punica granatum HOM05D004852 ORTHO05D006128 5.4e-22 109.4 199 33.7
Phvul.002G053200 Phaseolus vulgaris HOM05D004852 ORTHO05D006128 9.3e-22 108.6 305 29.5
Atru.chr3.2810 Acer truncatum HOM05D004852 ORTHO05D006128 1.2e-21 108.2 306 28.1
FAN15G1156 Fragaria x ananassa HOM05D004852 ORTHO05D006128 1.2e-21 108.2 315 27.3
QL11p033063 Quercus lobata HOM05D004852 ORTHO05D006128 1.2e-21 108.2 193 32.6
Atru.chr5.2475 Acer truncatum HOM05D004852 ORTHO05D006128 2.7e-21 107.1 309 28.2
ECA236G4936 Erigeron canadensis HOM05D004852 ORTHO05D006128 2.7e-21 107.1 290 30.3
Gohir.A13G044100 Gossypium hirsutum HOM05D004852 ORTHO05D006128 2.7e-21 107.1 203 34.5
Os06g0691000 Oryza sativa ssp. japonica HOM05D004852 ORTHO05D006128 2.7e-21 107.1 224 32.1
Aa31LG9G8420 Aethionema arabicum HOM05D004852 ORTHO05D006128 3.5e-21 106.7 294 29.6
Ciclev10027730m.g Citrus clementina HOM05D004852 ORTHO05D006128 6.0e-21 105.9 242 29.3
CsaV3_7G008100 Cucumis sativus L. HOM05D004852 ORTHO05D006128 6.0e-21 105.9 193 33.2
Lsat_1_v5_gn_7_85781 Lactuca sativa HOM05D004852 ORTHO05D006128 7.8e-21 105.5 197 35.0
Duzib205G0175 Durio zibethinus HOM05D004852 ORTHO05D006128 1.0e-20 105.1 199 33.2
Gohir.D13G043200 Gossypium hirsutum HOM05D004852 ORTHO05D006128 1.0e-20 105.1 203 33.5
CSS0042044 Camellia sinensis var. sinensis HOM05D004852 ORTHO05D006128 1.3e-20 104.8 341 29.6
Thecc.02G110100 Theobroma cacao HOM05D004852 ORTHO05D006128 1.3e-20 104.8 317 28.7
Gorai.013G047900 Gossypium raimondii HOM05D004852 ORTHO05D006128 1.7e-20 104.4 197 32.5
Potri.009G094400 Populus trichocarpa HOM05D004852 ORTHO05D006128 1.7e-20 104.4 318 28.3
MELO3C005497.2 Cucumis melo HOM05D004852 ORTHO05D006128 5.1e-20 102.8 298 27.9
arahy.Tifrunner.gnm1.ann1.F6JX6R Arachis hypogaea HOM05D004852 ORTHO05D006128 6.6e-20 102.4 233 30.5
ClCG02G006490 Citrullus lanatus HOM05D004852 ORTHO05D006128 6.6e-20 102.4 310 29.7
Hund06310 Selenicereus undatus HOM05D004852 ORTHO05D006128 8.7e-20 102.1 315 29.8
EL10Ac9g22261 Beta vulgaris HOM05D004852 ORTHO05D006128 1.1e-19 101.7 306 29.4
Actinidia05501 Actinidia chinensis HOM05D004852 ORTHO05D006128 1.5e-19 101.3 305 29.5
Cc02_g19340 Coffea canephora HOM05D004852 ORTHO05D006128 1.5e-19 101.3 194 34.0
RcHm_v2.0_Chr6g0254741 Rosa chinensis HOM05D004852 ORTHO05D006128 1.5e-19 101.3 333 27.0
AT5G44750 Arabidopsis thaliana HOM05D004852 ORTHO05D006128 1.9e-19 100.9 216 33.8
Prupe.8G136700 Prunus persica HOM05D004852 ORTHO05D006128 2.5e-19 100.5 333 27.0
Sed0001586 Sechium edule HOM05D004852 ORTHO05D006128 2.5e-19 100.5 290 29.0
AL8G14780 Arabidopsis lyrata HOM05D004852 ORTHO05D006128 4.3e-19 99.8 215 34.4
AUR62039064 Chenopodium quinoa HOM05D004852 ORTHO05D006128 4.3e-19 99.8 201 31.8
Solyc01g107510.3 Solanum lycopersicum HOM05D004852 ORTHO05D006128 4.3e-19 99.8 309 28.2
TWI79G0830 Tripterygium wilfordii HOM05D004852 ORTHO05D006128 5.6e-19 99.4 201 33.3
Rhsim05G0088900 Rhododendron simsii HOM05D004852 ORTHO05D006128 7.3e-19 99.0 309 28.2
CARHR178150 Cardamine hirsuta HOM05D004852 ORTHO05D006128 1.6e-18 97.8 209 33.0
CDE01G0038 Ceratophyllum demersum HOM05D004852 ORTHO05D006128 1.6e-18 97.8 200 33.5
vmacro19454 Vaccinium macrocarpon HOM05D004852 ORTHO05D006128 1.6e-18 97.8 328 28.0
Carub.0008s0351 Capsella rubella HOM05D004852 ORTHO05D006128 2.8e-18 97.1 299 31.8
BraA06t27566Z Brassica rapa HOM05D004852 ORTHO05D006128 6.2e-18 95.9 293 31.1
CAN.G606.8 Capsicum annuum HOM05D004852 ORTHO05D006128 6.2e-18 95.9 315 28.3
SalBow3G4263 Salvia bowleyana HOM05D004852 ORTHO05D006128 6.2e-18 95.9 300 29.7
Sopen01g049730 Solanum pennellii HOM05D004852 ORTHO05D006128 8.1e-18 95.5 305 27.2
MD10G1098400 Malus domestica HOM05D004852 ORTHO05D006128 1.1e-17 95.1 342 26.9
BolC7t43304H Brassica oleracea HOM05D004852 ORTHO05D006128 1.4e-17 94.7 206 33.0
HanXRQChr17g0570571 Helianthus annuus HOM05D004852 ORTHO05D006128 1.4e-17 94.7 303 29.7
DCAR_029088 Daucus carota HOM05D004852 ORTHO05D006128 1.8e-17 94.4 191 32.5
A06p46930 Brassica napus HOM05D004852 ORTHO05D006128 3.1e-17 93.6 290 31.0
PSO541G3304 Papaver somniferum HOM05D004852 ORTHO05D006128 9.0e-17 92.0 314 27.1
Sp2g09590 Schrenkiella parvula HOM05D004852 ORTHO05D006128 9.0e-17 92.0 305 31.1
AUR62010324 Chenopodium quinoa HOM05D004852 ORTHO05D006128 2.6e-16 90.5 274 26.6
AagrBONN_evm.TU.Sc2ySwM_228.1916 Anthoceros agrestis HOM05D004852 ORTHO05D006128 3.4e-16 90.1 304 28.3
BcaNung06822 Brassica carinata HOM05D004852 ORTHO05D006128 4.5e-16 89.7 294 29.6
C07p27720 Brassica napus HOM05D004852 ORTHO05D006128 7.6e-16 89.0 290 29.7
HPP92_017090 Vanilla planifolia HOM05D004852 ORTHO05D006128 7.6e-16 89.0 115 39.1
Phvul.002G053400 Phaseolus vulgaris HOM05D004852 ORTHO05D006128 1.7e-15 87.8 183 32.8
Migut.N01158 Erythranthe guttata HOM05D004852 ORTHO05D006128 2.2e-15 87.4 297 27.3
Rhsim05G0099800 Rhododendron simsii HOM05D004852 ORTHO05D006128 2.2e-15 87.4 116 38.8
SGA_v2.0_scaffold106G30732 Striga asiatica HOM05D004852 ORTHO05D006128 3.8e-15 86.7 289 27.0
COL.COLO4_32578 Corchorus olitorius HOM05D004852 ORTHO05D006128 8.4e-15 85.5 177 31.6
PGSC0003DMG403025764 Solanum tuberosum HOM05D004852 ORTHO05D006128 5.4e-14 82.8 285 27.0
Oeu044275.2 Olea europaea HOM05D004852 ORTHO05D006128 7.1e-14 82.4 277 28.2
Nitab4.5_0004326g0020 Nicotiana tabacum HOM05D004852 ORTHO05D006128 1.3e-12 78.2 320 26.9
Nitab4.5_0001143g0010 Nicotiana tabacum HOM05D004852 ORTHO05D006128 3.9e-12 76.6 280 25.0
Peaxi162Scf00016g02441 Petunia axillaris HOM05D004852 ORTHO05D006128 1.5e-11 74.7 256 25.4
Sc18g0005570 Simmondsia chinensis HOM05D004852 ORTHO05D006128 1.9e-11 74.3 186 26.3
ATR0205G027 Amborella trichopoda HOM05D004852 ORTHO05D006128 2.1e-10 70.9 176 27.3
unitig_26.g10234 Utricularia gibba HOM05D004852 ORTHO05D006128 6.2e-10 69.3 163 30.7
Lj5A215G62 Lonicera japonica HOM05D004852 ORTHO05D006128 8.1e-10 68.9 309 24.3
Ah.01g018340 Amaranthus hybridus HOM05D004852 ORTHO05D006128 1.8e-09 67.8 206 25.7
FvH4_4g00090 Fragaria vesca HOM05D004852 ORTHO05D004145 1.8e-09 67.8 105 33.3
Pp3c22_4740 Physcomitrium patens HOM05D004852 ORTHO05D006128 4.0e-09 66.6 307 23.1


User provided reference genes

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