Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_39045 Sequoiadendron giganteum HOM05D004763 ORTHO05D007492 2.0e-118 429.1 218 100.0
Gorai.013G250000 Gossypium raimondii HOM05D004763 ORTHO05D007492 1.5e-84 316.6 215 74.0
Gohir.D13G219100 Gossypium hirsutum HOM05D004763 ORTHO05D007492 3.3e-84 315.5 215 73.5
Gohir.A13G215400 Gossypium hirsutum HOM05D004763 ORTHO05D007492 9.5e-84 313.9 215 73.5
Duzib150G1218 Durio zibethinus HOM05D004763 ORTHO05D007492 2.1e-83 312.8 215 72.1
Lju1319A4T15 Lonicera japonica HOM05D004763 ORTHO05D007492 4.7e-83 311.6 215 72.6
Haze_23044 Corylus avellana HOM05D004763 ORTHO05D007492 8.1e-83 310.8 215 71.2
Nn7g36058 Nelumbo nucifera HOM05D004763 ORTHO05D007492 8.1e-83 310.8 216 73.1
GSVIVG01025336001 Vitis vinifera HOM05D004763 ORTHO05D007492 1.1e-82 310.5 217 71.4
Dinv36304 Davidia involucrata HOM05D004763 ORTHO05D007492 1.4e-82 310.1 217 72.4
CiPaw.14G125100 Carya illinoinensis HOM05D004763 ORTHO05D007492 4.0e-82 308.5 215 71.2
PSO339G3791 Papaver somniferum HOM05D004763 ORTHO05D007492 6.8e-82 307.8 217 70.5
Hma1.2p1_1169F.1_g263300 Hydrangea macrophylla HOM05D004763 ORTHO05D007492 8.9e-82 307.4 216 71.8
CDE04G0998 Ceratophyllum demersum HOM05D004763 ORTHO05D007492 1.2e-81 307.0 215 74.4
Migut.D00558 Erythranthe guttata HOM05D004763 ORTHO05D007492 1.2e-81 307.0 217 70.5
TAR623G1126 Trochodendron aralioides HOM05D004763 ORTHO05D007492 1.2e-81 307.0 217 71.4
EL10Ac4g10318 Beta vulgaris HOM05D004763 ORTHO05D007492 1.5e-81 306.6 217 71.4
Thecc.09G223100 Theobroma cacao HOM05D004763 ORTHO05D007492 1.5e-81 306.6 217 71.0
CSS0044360 Camellia sinensis var. sinensis HOM05D004763 ORTHO05D007492 2.6e-81 305.8 217 71.0
MELO3C014639.2 Cucumis melo HOM05D004763 ORTHO05D007492 2.6e-81 305.8 214 72.4
DCAR_024396 Daucus carota HOM05D004763 ORTHO05D007492 2.6e-81 305.8 217 71.9
QL01p006243 Quercus lobata HOM05D004763 ORTHO05D007492 2.6e-81 305.8 215 70.7
COL.COLO4_09893 Corchorus olitorius HOM05D004763 ORTHO05D007492 3.4e-81 305.4 213 70.4
CsaV3_4G023800 Cucumis sativus L. HOM05D004763 ORTHO05D007492 3.4e-81 305.4 214 72.0
HanXRQChr14g0451781 Helianthus annuus HOM05D004763 ORTHO05D007492 4.4e-81 305.1 219 72.6
Hma1.2p1_1169F.1_g263310 Hydrangea macrophylla HOM05D004763 ORTHO05D007492 4.4e-81 305.1 215 71.6
Manes.14G014500 Manihot esculenta HOM05D004763 ORTHO05D007492 4.4e-81 305.1 214 72.4
Ah.04g161760 Amaranthus hybridus HOM05D004763 ORTHO05D007492 9.9e-81 303.9 216 71.3
arahy.Tifrunner.gnm1.ann1.X75IXN Arachis hypogaea HOM05D004763 ORTHO05D007492 9.9e-81 303.9 219 71.2
Carub.0003s2074 Capsella rubella HOM05D004763 ORTHO05D007492 9.9e-81 303.9 215 71.2
Hund22081 Selenicereus undatus HOM05D004763 ORTHO05D007492 9.9e-81 303.9 217 70.0
HPP92_020536 Vanilla planifolia HOM05D004763 ORTHO05D007492 9.9e-81 303.9 213 69.5
arahy.Tifrunner.gnm1.ann1.VYK1P0 Arachis hypogaea HOM05D004763 ORTHO05D007492 1.3e-80 303.5 219 71.2
Cc01_g04070 Coffea canephora HOM05D004763 ORTHO05D007492 1.3e-80 303.5 217 70.5
Sc09g0000480 Simmondsia chinensis HOM05D004763 ORTHO05D007492 1.3e-80 303.5 218 70.2
Glyma.13G342900 Glycine max HOM05D004763 ORTHO05D007492 1.7e-80 303.1 217 71.4
Sed0013957 Sechium edule HOM05D004763 ORTHO05D007492 2.2e-80 302.8 217 70.5
CAN.G442.1 Capsicum annuum HOM05D004763 ORTHO05D007492 2.9e-80 302.4 216 69.4
arahy.Tifrunner.gnm1.ann1.GN3GFY Arachis hypogaea HOM05D004763 ORTHO05D007492 3.8e-80 302.0 219 70.8
TWI34G0672 Tripterygium wilfordii HOM05D004763 ORTHO05D007492 3.8e-80 302.0 217 70.0
Nitab4.5_0003069g0050 Nicotiana tabacum HOM05D004763 ORTHO05D007492 6.4e-80 301.2 217 71.9
Psat5g288480 Pisum sativum HOM05D004763 ORTHO05D007492 6.4e-80 301.2 217 70.5
Pp3c22_12720 Physcomitrium patens HOM05D004763 ORTHO05D007492 1.4e-79 300.1 215 71.2
Zm00001eb308780 Zea mays HOM05D004763 ORTHO05D007492 1.4e-79 300.1 217 68.2
C05p43300 Brassica napus HOM05D004763 ORTHO05D007492 1.9e-79 299.7 215 70.7
Ciclev10014511m.g Citrus clementina HOM05D004763 ORTHO05D007492 1.9e-79 299.7 217 69.6
Phvul.005G150500 Phaseolus vulgaris HOM05D004763 ORTHO05D007492 1.9e-79 299.7 217 71.0
Sp3g18800 Schrenkiella parvula HOM05D004763 ORTHO05D007492 1.9e-79 299.7 215 70.7
THA.LOC104816912 Tarenaya hassleriana HOM05D004763 ORTHO05D007492 1.9e-79 299.7 214 70.6
AT3G20780 Arabidopsis thaliana HOM05D004763 ORTHO05D007492 2.4e-79 299.3 215 70.2
Mapoly0042s0060 Marchantia polymorpha HOM05D004763 ORTHO05D007492 2.4e-79 299.3 215 70.2
ATR0605G091 Amborella trichopoda HOM05D004763 ORTHO05D007492 3.2e-79 298.9 215 70.7
arahy.Tifrunner.gnm1.ann1.P0K6XU Arachis hypogaea HOM05D004763 ORTHO05D007492 4.1e-79 298.5 219 70.3
ECA238G4453 Erigeron canadensis HOM05D004763 ORTHO05D007492 4.1e-79 298.5 219 70.3
Thhalv10020214m.g Eutrema salsugineum HOM05D004763 ORTHO05D007492 4.1e-79 298.5 215 70.2
Aqoxy1G00185 Aquilegia oxysepala HOM05D004763 ORTHO05D007492 5.4e-79 298.1 215 68.4
AL3G34700 Arabidopsis lyrata HOM05D004763 ORTHO05D007492 5.4e-79 298.1 215 70.2
BcaC05g28282 Brassica carinata HOM05D004763 ORTHO05D007492 5.4e-79 298.1 215 70.2
CANSAT54G1729 Cannabis sativa HOM05D004763 ORTHO05D007492 5.4e-79 298.1 222 68.5
CARHR096610 Cardamine hirsuta HOM05D004763 ORTHO05D007492 5.4e-79 298.1 215 69.8
Medtr2g098510 Medicago truncatula HOM05D004763 ORTHO05D007492 5.4e-79 298.1 217 69.1
Sopen01g009200 Solanum pennellii HOM05D004763 ORTHO05D007492 5.4e-79 298.1 217 68.7
BcaB06g26148 Brassica carinata HOM05D004763 ORTHO05D007492 7.1e-79 297.7 215 70.7
Os09g0279600 Oryza sativa ssp. japonica HOM05D004763 ORTHO05D007492 7.1e-79 297.7 212 69.8
Lalb_Chr14g0372291 Lupinus albus HOM05D004763 ORTHO05D007492 9.2e-79 297.4 218 70.2
Solyc01g014490.4 Solanum lycopersicum HOM05D004763 ORTHO05D007492 9.2e-79 297.4 217 68.7
VMungo1080G1755 Vigna mungo HOM05D004763 ORTHO05D007492 1.2e-78 297.0 213 71.8
Sabra03G0153800 Salix brachista HOM05D004763 ORTHO05D007492 2.1e-78 296.2 214 67.8
Sabra03G0156000 Salix brachista HOM05D004763 ORTHO05D007492 2.1e-78 296.2 214 67.8
BolC5t33062H Brassica oleracea HOM05D004763 ORTHO05D007492 2.7e-78 295.8 214 70.1
BraA05t21683Z Brassica rapa HOM05D004763 ORTHO05D007492 2.7e-78 295.8 216 69.4
A05p28000 Brassica napus HOM05D004763 ORTHO05D007492 4.6e-78 295.0 216 69.4
PGSC0003DMG402029907 Solanum tuberosum HOM05D004763 ORTHO05D007492 1.0e-77 293.9 218 68.8
Peaxi162Scf00773g00119 Petunia axillaris HOM05D004763 ORTHO05D007492 1.7e-77 293.1 223 67.3
TPR.G18851 Trifolium pratense HOM05D004763 ORTHO05D007492 1.7e-77 293.1 208 72.6
SGA_v2.0_scaffold1G00797 Striga asiatica HOM05D004763 ORTHO05D007492 2.3e-77 292.7 217 70.5
AUR62019250 Chenopodium quinoa HOM05D004763 ORTHO05D007492 3.9e-77 292.0 217 69.6
Potri.003G211000 Populus trichocarpa HOM05D004763 ORTHO05D007492 3.9e-77 292.0 214 66.8
Eucgr.B03662 Eucalyptus grandis HOM05D004763 ORTHO05D007492 5.1e-77 291.6 217 68.2
AagrBONN_evm.TU.Sc2ySwM_344.3405 Anthoceros agrestis HOM05D004763 ORTHO05D007492 1.9e-76 289.7 216 67.1
Cpa.g.sc84.111 Carica papaya HOM05D004763 ORTHO05D007492 1.6e-75 286.6 243 62.6
Actinidia39377 Actinidia chinensis HOM05D004763 ORTHO05D007492 2.1e-75 286.2 218 68.3
Lj3g0020649 Lotus japonicus HOM05D004763 ORTHO05D007492 2.8e-75 285.8 214 68.7
Lj4g0010878 Lotus japonicus HOM05D004763 ORTHO05D007492 1.1e-74 283.9 216 68.1
Nitab4.5_0006575g0020 Nicotiana tabacum HOM05D004763 ORTHO05D007492 1.1e-74 283.9 240 65.0
FAN16G3272 Fragaria x ananassa HOM05D004763 ORTHO05D007492 5.8e-73 278.1 216 64.4
FvH4_3g43550 Fragaria vesca HOM05D004763 ORTHO05D007492 1.7e-72 276.6 216 63.4
MD03G1021100 Malus domestica HOM05D004763 ORTHO05D007492 2.9e-72 275.8 218 63.8
Atru.chr3.2503 Acer truncatum HOM05D004763 ORTHO05D007492 3.8e-72 275.4 217 65.9
CBR_g31022 Chara braunii HOM05D004763 ORTHO05D007492 3.8e-72 275.4 216 65.3
FAN11G0713 Fragaria x ananassa HOM05D004763 ORTHO05D007492 3.8e-72 275.4 216 63.0
FAN11G2145 Fragaria x ananassa HOM05D004763 ORTHO05D007492 3.8e-72 275.4 216 63.0
Ca_01270_v3 Cicer arietinum L. HOM05D004763 ORTHO05D007492 6.4e-72 274.6 217 65.9
RcHm_v2.0_Chr5g0078101 Rosa chinensis HOM05D004763 ORTHO05D007492 6.4e-72 274.6 216 63.9
Actinidia06319 Actinidia chinensis HOM05D004763 ORTHO05D007492 1.9e-71 273.1 219 65.8
Prupe.6G018600 Prunus persica HOM05D004763 ORTHO05D007492 2.7e-70 269.2 234 61.1
SMO116G0144 Selaginella moellendorffii HOM05D004763 ORTHO05D007492 1.3e-69 266.9 214 62.1
Lsat_1_v5_gn_2_101121 Lactuca sativa HOM05D004763 ORTHO05D007492 5.6e-68 261.5 224 63.4
PGR102G0325 Punica granatum HOM05D004763 ORTHO05D007492 6.2e-67 258.1 207 65.7
Aa31LG8G7590 Aethionema arabicum HOM05D004763 ORTHO05D007492 6.9e-66 254.6 168 76.8
FAN21G2003 Fragaria x ananassa HOM05D004763 ORTHO05D007492 2.0e-65 253.1 189 66.7
Rhsim01G0189300 Rhododendron simsii HOM05D004763 ORTHO05D007492 2.6e-65 252.7 217 61.8
Lj1C366G5 Lonicera japonica HOM05D004763 ORTHO05D007492 2.3e-61 239.6 215 59.1
Aqoxy381s001 Aquilegia oxysepala HOM05D004763 ORTHO05D007492 4.5e-57 225.3 228 55.7
Eucgr.B03660 Eucalyptus grandis HOM05D004763 ORTHO05D007492 9.3e-55 217.6 176 63.6
Cre01.g019750 Chlamydomonas reinhardtii HOM05D004763 ORTHO05D007492 2.1e-51 206.5 241 47.3
PRCOL_00005940 Prasinoderma coloniale HOM05D004763 ORTHO05D007492 2.2e-48 196.4 229 50.2
TPR.G29743 Trifolium pratense HOM05D004763 ORTHO05D007492 2.5e-47 193.0 214 53.3
MCO09G243 Micromonas commoda HOM05D004763 ORTHO05D007492 1.6e-43 180.3 231 46.3
Potri.T085401 Populus trichocarpa HOM05D004763 ORTHO05D007492 2.0e-33 146.7 78 88.5
Lsat_1_v5_gn_1_126941 Lactuca sativa HOM05D004763 ORTHO05D007492 2.2e-32 143.3 162 48.8
Lsat_1_v5_gn_1_127001 Lactuca sativa HOM05D004763 ORTHO05D007492 2.0e-28 130.2 78 78.2
Lsat_1_v5_gn_1_127161 Lactuca sativa HOM05D004763 ORTHO05D007492 3.8e-24 115.9 132 49.2
Lsat_1_v5_gn_1_127121 Lactuca sativa HOM05D004763 ORTHO05D007492 1.4e-18 97.4 130 43.8
Lsat_1_v5_gn_1_126981 Lactuca sativa HOM05D004763 ORTHO05D007492 7.2e-07 58.5 33 78.8


User provided reference genes

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