Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_37309 Sequoiadendron giganteum HOM05D003266 ORTHO05D036665 0.0e+00 1808.1 894 100.0
SEGI_01034 Sequoiadendron giganteum HOM05D003266 ORTHO05D036665 0.0e+00 1570.4 779 100.0
Mapoly0010s0126 Marchantia polymorpha HOM05D003266 ORTHO05D036665 6.7e-91 339.7 922 29.4
Pp3c18_12540 Physcomitrium patens HOM05D003266 ORTHO05D003718 8.0e-52 209.9 436 34.4
SMO173G0095 Selaginella moellendorffii HOM05D003266 ORTHO05D003718 1.2e-47 196.1 884 23.1
MCO04G482 Micromonas commoda HOM05D003266 ORTHO05D003718 5.4e-24 117.5 115 48.7
Cre16.g680678 Chlamydomonas reinhardtii HOM05D003266 ORTHO05D003718 4.3e-21 107.8 134 40.3
Aa31LG10G2720 Aethionema arabicum HOM05D003266 ORTHO05D003718 9.5e-21 106.7 351 25.6
Hund09088 Selenicereus undatus HOM05D003266 ORTHO05D003718 2.8e-20 105.1 350 25.4
Sp1g38720 Schrenkiella parvula HOM05D003266 ORTHO05D003718 8.0e-20 103.6 351 24.8
Carub.0003s1601 Capsella rubella HOM05D003266 ORTHO05D003718 1.8e-19 102.4 350 25.4
Manes.11G036300 Manihot esculenta HOM05D003266 ORTHO05D003718 4.0e-19 101.3 348 25.3
Aqoxy7G01499 Aquilegia oxysepala HOM05D003266 ORTHO05D003718 5.2e-19 100.9 360 25.8
CARHR091470 Cardamine hirsuta HOM05D003266 ORTHO05D003718 5.2e-19 100.9 347 24.8
HanXRQChr09g0275951 Helianthus annuus HOM05D003266 ORTHO05D003718 6.8e-19 100.5 346 27.5
Aa31LG8G3410 Aethionema arabicum HOM05D003266 ORTHO05D003718 1.2e-18 99.8 351 25.4
Sopen10g030300 Solanum pennellii HOM05D003266 ORTHO05D003718 1.2e-18 99.8 351 25.9
Thhalv10019999m.g Eutrema salsugineum HOM05D003266 ORTHO05D003718 1.5e-18 99.4 350 25.4
THA.LOC104817970 Tarenaya hassleriana HOM05D003266 ORTHO05D003718 1.5e-18 99.4 350 25.1
TAR636G2661 Trochodendron aralioides HOM05D003266 ORTHO05D003718 1.5e-18 99.4 360 27.2
TAR383G0500 Trochodendron aralioides HOM05D003266 ORTHO05D003718 2.0e-18 99.0 368 25.5
Solyc10g079670.2 Solanum lycopersicum HOM05D003266 ORTHO05D003718 2.6e-18 98.6 345 25.8
AT3G16260 Arabidopsis thaliana HOM05D003266 ORTHO05D003718 3.4e-18 98.2 349 23.8
BraA05t22151Z Brassica rapa HOM05D003266 ORTHO05D003718 3.4e-18 98.2 351 24.2
Nitab4.5_0002424g0070 Nicotiana tabacum HOM05D003266 ORTHO05D003718 3.4e-18 98.2 348 26.4
ATR0705G157 Amborella trichopoda HOM05D003266 ORTHO05D003718 4.4e-18 97.8 373 27.1
AL3G29000 Arabidopsis lyrata HOM05D003266 ORTHO05D003718 4.4e-18 97.8 350 24.3
CARHR042320 Cardamine hirsuta HOM05D003266 ORTHO05D003718 4.4e-18 97.8 337 24.3
BcaB06g25715 Brassica carinata HOM05D003266 ORTHO05D003718 5.8e-18 97.4 351 24.5
Lj5C56T10 Lonicera japonica HOM05D003266 ORTHO05D003718 5.8e-18 97.4 359 24.8
Pp3c14_3370 Physcomitrium patens HOM05D003266 ORTHO05D003718 5.8e-18 97.4 363 23.7
AUR62031873 Chenopodium quinoa HOM05D003266 ORTHO05D003718 7.5e-18 97.1 353 26.1
AUR62032707 Chenopodium quinoa HOM05D003266 ORTHO05D003718 7.5e-18 97.1 353 26.1
CAN.G641.60 Capsicum annuum HOM05D003266 ORTHO05D003718 9.8e-18 96.7 345 25.2
Atru.chr1.3468 Acer truncatum HOM05D003266 ORTHO05D003718 1.3e-17 96.3 353 25.5
BraA06t23416Z Brassica rapa HOM05D003266 ORTHO05D003718 1.3e-17 96.3 349 23.2
Carub.0001s4111 Capsella rubella HOM05D003266 ORTHO05D003718 1.3e-17 96.3 351 23.9
TWI12G1119 Tripterygium wilfordii HOM05D003266 ORTHO05D003718 1.3e-17 96.3 352 23.3
TAR626G0182 Trochodendron aralioides HOM05D003266 ORTHO05D003718 1.3e-17 96.3 360 26.7
arahy.Tifrunner.gnm1.ann1.MP8KIY Arachis hypogaea HOM05D003266 ORTHO05D003718 1.7e-17 95.9 343 26.5
CANSAT80G0873 Cannabis sativa HOM05D003266 ORTHO05D003718 1.7e-17 95.9 339 26.0
Dinv38001 Davidia involucrata HOM05D003266 ORTHO05D003718 1.7e-17 95.9 349 25.5
Thhalv10011231m.g Eutrema salsugineum HOM05D003266 ORTHO05D003718 1.7e-17 95.9 354 23.7
Nitab4.5_0000571g0240 Nicotiana tabacum HOM05D003266 ORTHO05D003718 1.7e-17 95.9 345 25.2
Nn2g12597 Nelumbo nucifera HOM05D003266 ORTHO05D003718 2.2e-17 95.5 350 24.6
A05p33260 Brassica napus HOM05D003266 ORTHO05D003718 2.9e-17 95.1 350 24.3
CANSAT56G3441 Cannabis sativa HOM05D003266 ORTHO05D003718 2.9e-17 95.1 346 25.1
Gorai.011G072800 Gossypium raimondii HOM05D003266 ORTHO05D003718 2.9e-17 95.1 357 24.4
SalBow2G0145 Salvia bowleyana HOM05D003266 ORTHO05D003718 2.9e-17 95.1 303 27.1
BcaC05g28901 Brassica carinata HOM05D003266 ORTHO05D003718 4.9e-17 94.4 350 24.3
Cpa.g.sc34.31 Carica papaya HOM05D003266 ORTHO05D003718 4.9e-17 94.4 345 26.7
CiPaw.01G233800 Carya illinoinensis HOM05D003266 ORTHO05D003718 4.9e-17 94.4 348 26.1
Haze_16335 Corylus avellana HOM05D003266 ORTHO05D003718 4.9e-17 94.4 355 25.6
Gohir.A10G067100 Gossypium hirsutum HOM05D003266 ORTHO05D003718 4.9e-17 94.4 353 24.1
PGSC0003DMG401002553 Solanum tuberosum HOM05D003266 ORTHO05D003718 4.9e-17 94.4 348 26.7
C05p50250 Brassica napus HOM05D003266 ORTHO05D003718 6.4e-17 94.0 350 24.0
BolC5t33776H Brassica oleracea HOM05D003266 ORTHO05D003718 6.4e-17 94.0 350 24.3
Gohir.D10G068200 Gossypium hirsutum HOM05D003266 ORTHO05D003718 6.4e-17 94.0 357 24.4
Mapoly0003s0137 Marchantia polymorpha HOM05D003266 ORTHO05D003718 6.4e-17 94.0 350 26.6
PGSC0003DMG400026462 Solanum tuberosum HOM05D003266 ORTHO05D003718 6.4e-17 94.0 349 29.5
Ah.01g021810 Amaranthus hybridus HOM05D003266 ORTHO05D003718 1.1e-16 93.2 307 27.7
Glyma.13G356200 Glycine max HOM05D003266 ORTHO05D003718 1.1e-16 93.2 365 24.4
RcHm_v2.0_Chr2g0139581 Rosa chinensis HOM05D003266 ORTHO05D003718 1.1e-16 93.2 349 24.6
Actinidia21698 Actinidia chinensis HOM05D003266 ORTHO05D003718 1.4e-16 92.8 348 26.1
AT1G52160 Arabidopsis thaliana HOM05D003266 ORTHO05D003718 1.4e-16 92.8 349 23.2
DCAR_026337 Daucus carota HOM05D003266 ORTHO05D003718 1.4e-16 92.8 348 24.4
Glyma.15G017900 Glycine max HOM05D003266 ORTHO05D003718 1.4e-16 92.8 367 24.8
Gohir.A01G067100 Gossypium hirsutum HOM05D003266 ORTHO05D003718 1.4e-16 92.8 348 23.3
Sp3g14630 Schrenkiella parvula HOM05D003266 ORTHO05D003718 1.4e-16 92.8 351 25.1
AL1G60260 Arabidopsis lyrata HOM05D003266 ORTHO05D003718 1.9e-16 92.4 356 25.0
Migut.I00926 Erythranthe guttata HOM05D003266 ORTHO05D003718 1.9e-16 92.4 350 24.9
HanXRQChr16g0501281 Helianthus annuus HOM05D003266 ORTHO05D003718 1.9e-16 92.4 345 25.5
Nitab4.5_0006515g0010 Nicotiana tabacum HOM05D003266 ORTHO05D003718 1.9e-16 92.4 353 24.9
A06p02000 Brassica napus HOM05D003266 ORTHO05D003718 2.4e-16 92.0 341 23.5
MBI04_g27074_MAGBIO Magnolia biondii HOM05D003266 ORTHO05D003718 2.4e-16 92.0 354 25.7
PSO210G6470 Papaver somniferum HOM05D003266 ORTHO05D003718 2.4e-16 92.0 315 26.0
SHI11014 Sapria himalayana HOM05D003266 ORTHO05D003718 2.4e-16 92.0 346 24.0
C06p07410 Brassica napus HOM05D003266 ORTHO05D003718 4.1e-16 91.3 349 22.6
BolC6t35830H Brassica oleracea HOM05D003266 ORTHO05D003718 4.1e-16 91.3 349 22.6
Duzib160G0509 Durio zibethinus HOM05D003266 ORTHO05D003718 4.1e-16 91.3 350 24.0
Manes.08G110200 Manihot esculenta HOM05D003266 ORTHO05D003718 4.1e-16 91.3 348 23.6
FvH4_6g31990 Fragaria vesca HOM05D003266 ORTHO05D003718 5.4e-16 90.9 351 24.5
Cc04_g02800 Coffea canephora HOM05D003266 ORTHO05D003718 7.0e-16 90.5 316 25.0
MELO3C024265.2 Cucumis melo HOM05D003266 ORTHO05D003718 7.0e-16 90.5 348 23.9
PGR102G0722 Punica granatum HOM05D003266 ORTHO05D003718 7.0e-16 90.5 339 25.1
COL.COLO4_30471 Corchorus olitorius HOM05D003266 ORTHO05D003718 9.2e-16 90.1 351 25.4
FAN14G1864 Fragaria x ananassa HOM05D003266 ORTHO05D003718 9.2e-16 90.1 351 24.5
Lalb_Chr22g0351451 Lupinus albus HOM05D003266 ORTHO05D003718 9.2e-16 90.1 334 26.6
Phvul.005G170100 Phaseolus vulgaris HOM05D003266 ORTHO05D003718 9.2e-16 90.1 366 24.0
CsaV3_7G033540 Cucumis sativus L. HOM05D003266 ORTHO05D003718 1.2e-15 89.7 348 24.7
Nitab4.5_0013558g0010 Nicotiana tabacum HOM05D003266 ORTHO05D003718 1.2e-15 89.7 348 25.6
SEGI_12386 Sequoiadendron giganteum HOM05D003266 ORTHO05D003718 1.2e-15 89.7 316 25.0
TPR.G37248 Trifolium pratense HOM05D003266 ORTHO05D003718 1.2e-15 89.7 351 26.5
vmacro18872 Vaccinium macrocarpon HOM05D003266 ORTHO05D003718 1.2e-15 89.7 350 25.4
ClCG09G001800 Citrullus lanatus HOM05D003266 ORTHO05D003718 1.6e-15 89.4 348 24.4
Actinidia32711 Actinidia chinensis HOM05D003266 ORTHO05D003718 2.7e-15 88.6 348 25.3
MD03G1197500 Malus domestica HOM05D003266 ORTHO05D003718 2.7e-15 88.6 350 24.0
Sed0020980 Sechium edule HOM05D003266 ORTHO05D003718 2.7e-15 88.6 348 25.0
Sc12g0009560 Simmondsia chinensis HOM05D003266 ORTHO05D003718 3.5e-15 88.2 346 24.0
Sc12g0009670 Simmondsia chinensis HOM05D003266 ORTHO05D003718 3.5e-15 88.2 346 24.0
FAN05G1225 Fragaria x ananassa HOM05D003266 ORTHO05D003718 6.0e-15 87.4 351 23.9
BcaC08g43373 Brassica carinata HOM05D003266 ORTHO05D003718 7.8e-15 87.0 349 22.6
CAN.G394.131 Capsicum annuum HOM05D003266 ORTHO05D003718 7.8e-15 87.0 347 23.9
Sed0017993 Sechium edule HOM05D003266 ORTHO05D003718 7.8e-15 87.0 349 23.5
VMungo1080G0852 Vigna mungo HOM05D003266 ORTHO05D003718 7.8e-15 87.0 366 23.5
PSO339G2930 Papaver somniferum HOM05D003266 ORTHO05D003718 1.0e-14 86.7 90 43.3
AUR62024783 Chenopodium quinoa HOM05D003266 ORTHO05D003718 1.3e-14 86.3 345 23.5
Hund00661 Selenicereus undatus HOM05D003266 ORTHO05D003718 1.3e-14 86.3 363 25.1
Medtr2g101390 Medicago truncatula HOM05D003266 ORTHO05D003718 1.7e-14 85.9 353 25.5
Psat5g297200 Pisum sativum HOM05D003266 ORTHO05D003718 1.7e-14 85.9 349 25.2
PSO017G5626 Papaver somniferum HOM05D003266 ORTHO05D003718 3.0e-14 85.1 109 41.3
PSO210G4271 Papaver somniferum HOM05D003266 ORTHO05D003718 3.0e-14 85.1 319 26.3
Zm00001eb339290 Zea mays HOM05D003266 ORTHO05D003718 3.0e-14 85.1 352 25.3
CBR_g17159 Chara braunii HOM05D000019 ORTHO05D003718 5.0e-14 84.3 104 38.5
Lalb_Chr24g0396021 Lupinus albus HOM05D003266 ORTHO05D003718 5.0e-14 84.3 348 25.3
Aqoxy5G00790 Aquilegia oxysepala HOM05D003266 ORTHO05D003718 8.6e-14 83.6 354 24.3
SMO201G0121 Selaginella moellendorffii HOM05D003266 ORTHO05D003718 8.6e-14 83.6 122 35.2
SGA_v2.0_scaffold69G23353 Striga asiatica HOM05D003266 ORTHO05D003718 1.1e-13 83.2 179 35.2
Oeu062570.2 Olea europaea HOM05D003266 ORTHO05D003718 1.5e-13 82.8 90 42.2
SMO134G0187 Selaginella moellendorffii HOM05D003266 ORTHO05D003718 1.5e-13 82.8 311 25.4
MSTRG.22654 Avicennia marina HOM05D003266 ORTHO05D003718 1.9e-13 82.4 90 41.1
CSS0002644 Camellia sinensis var. sinensis HOM05D003266 ORTHO05D003718 1.9e-13 82.4 90 42.2
COL.COLO4_29286 Corchorus olitorius HOM05D003266 ORTHO05D003718 2.5e-13 82.0 90 40.0
Nitab4.5_0006202g0010 Nicotiana tabacum HOM05D003266 ORTHO05D003718 2.5e-13 82.0 90 41.1
Ciclev10024815m.g Citrus clementina HOM05D003266 ORTHO05D003718 4.3e-13 81.3 90 40.0
Solyc03g120470.4 Solanum lycopersicum HOM05D003266 ORTHO05D003718 4.3e-13 81.3 82 43.9
Sopen00g008370 Solanum pennellii HOM05D003266 ORTHO05D003718 4.3e-13 81.3 82 43.9
GSVIVG01017040001 Vitis vinifera HOM05D003266 ORTHO05D003718 4.3e-13 81.3 349 23.8
CANSAT80G0796 Cannabis sativa HOM05D003266 ORTHO05D003718 5.6e-13 80.9 90 41.1
Hma1.2p1_1689F.1_g297710 Hydrangea macrophylla HOM05D003266 ORTHO05D003718 5.6e-13 80.9 82 43.9
Peaxi162Scf00034g00317 Petunia axillaris HOM05D003266 ORTHO05D003718 5.6e-13 80.9 82 43.9
QL05p021182 Quercus lobata HOM05D003266 ORTHO05D003718 5.6e-13 80.9 90 40.0
Cfa002112 Carpinus fangiana HOM05D003266 ORTHO05D003718 7.3e-13 80.5 90 41.1
CBR_g8326 Chara braunii HOM05D003266 ORTHO05D003718 7.3e-13 80.5 82 42.7
Eucgr.J02950 Eucalyptus grandis HOM05D003266 ORTHO05D003718 7.3e-13 80.5 90 42.2
Lsat_1_v5_gn_4_100861 Lactuca sativa HOM05D003266 ORTHO05D003718 7.3e-13 80.5 79 45.6
Rhsim08G0225600 Rhododendron simsii HOM05D003266 ORTHO05D003718 7.3e-13 80.5 90 41.1
Hund06647 Selenicereus undatus HOM05D003266 ORTHO05D003718 7.3e-13 80.5 101 37.6
Potri.001G186900 Populus trichocarpa HOM05D003266 ORTHO05D003718 9.5e-13 80.1 90 38.9
Sabra01G0153400 Salix brachista HOM05D003266 ORTHO05D003718 9.5e-13 80.1 90 38.9
Thecc.06G095700 Theobroma cacao HOM05D003266 ORTHO05D003718 9.5e-13 80.1 90 37.8
AUR62022165 Chenopodium quinoa HOM05D003266 ORTHO05D003718 1.2e-12 79.7 79 44.3
EL10Ac2g02463 Beta vulgaris HOM05D003266 ORTHO05D003718 1.6e-12 79.3 90 38.9
Gohir.D01G054332 Gossypium hirsutum HOM05D003266 ORTHO05D003718 1.6e-12 79.3 365 25.2
Lj3g0015133 Lotus japonicus HOM05D003266 ORTHO05D003718 1.6e-12 79.3 90 40.0
Sopen12g022640 Solanum pennellii HOM05D003266 ORTHO05D003718 1.6e-12 79.3 185 33.0
CSS0038683 Camellia sinensis var. sinensis HOM05D003266 ORTHO05D003718 2.1e-12 79.0 90 40.0
Gorai.002G074200 Gossypium raimondii HOM05D003266 ORTHO05D003718 2.1e-12 79.0 364 25.3
Psat1g100680 Pisum sativum HOM05D003266 ORTHO05D003718 2.1e-12 79.0 82 42.7
EL10Ac9g22044 Beta vulgaris HOM05D003266 ORTHO05D003718 3.6e-12 78.2 90 38.9
CAN.G438.41 Capsicum annuum HOM05D003266 ORTHO05D003718 3.6e-12 78.2 120 35.0
CDE05G0037 Ceratophyllum demersum HOM05D003266 ORTHO05D003718 3.6e-12 78.2 79 44.3
Lj9C510G10 Lonicera japonica HOM05D003266 ORTHO05D003718 3.6e-12 78.2 120 35.8
Nitab4.5_0003039g0050 Nicotiana tabacum HOM05D003266 ORTHO05D003718 3.6e-12 78.2 104 38.5
Prupe.3G063700 Prunus persica HOM05D003266 ORTHO05D003718 3.6e-12 78.2 89 39.3
ECA232G0114 Erigeron canadensis HOM05D003266 ORTHO05D003718 4.7e-12 77.8 123 34.1
AUR62032438 Chenopodium quinoa HOM05D003266 ORTHO05D003718 8.0e-12 77.0 93 41.9
Hma1.2p1_1689F.1_g297680 Hydrangea macrophylla HOM05D003266 ORTHO05D003718 8.0e-12 77.0 79 44.3
Solyc12g044370.3 Solanum lycopersicum HOM05D003266 ORTHO05D003718 1.4e-11 76.3 174 32.2
Psat2g178960 Pisum sativum HOM05D003266 ORTHO05D003718 1.2e-10 73.2 90 37.8
CSS0038057 Camellia sinensis var. sinensis HOM05D003266 ORTHO05D003718 3.4e-10 71.6 349 24.4
Cre01.g039900 Chlamydomonas reinhardtii HOM05D003266 ORTHO05D003718 1.7e-09 69.3 92 37.0
PRCOL_00000971 Prasinoderma coloniale HOM05D003266 ORTHO05D003718 2.2e-09 68.9 83 44.6
Peaxi162Scf00015g00241 Petunia axillaris HOM05D003266 ORTHO05D003718 4.1e-08 64.7 82 39.0


User provided reference genes

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