Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_33812 Sequoiadendron giganteum HOM05D000228 ORTHO05D021177 1.6e-97 359.4 173 100.0
TAR623G0006 Trochodendron aralioides HOM05D000228 ORTHO05D001545 2.0e-52 209.5 145 69.0
ATR0594G163 Amborella trichopoda HOM05D000228 ORTHO05D001545 4.5e-52 208.4 123 78.9
Aqoxy4G03122 Aquilegia oxysepala HOM05D000228 ORTHO05D001545 2.2e-51 206.1 123 78.0
PSO384G5084 Papaver somniferum HOM05D000228 ORTHO05D001545 6.5e-51 204.5 146 67.1
Migut.A00876 Erythranthe guttata HOM05D000228 ORTHO05D001545 1.4e-50 203.4 159 62.3
Migut.C00025 Erythranthe guttata HOM05D000228 ORTHO05D001545 1.4e-50 203.4 159 62.3
PSO699G0040 Papaver somniferum HOM05D000228 ORTHO05D001545 1.4e-50 203.4 146 66.4
Actinidia03765 Actinidia chinensis HOM05D000228 ORTHO05D001545 1.9e-50 203.0 123 74.8
MSTRG.17722 Avicennia marina HOM05D000228 ORTHO05D001545 1.9e-50 203.0 163 61.3
Rhsim01G0223300 Rhododendron simsii HOM05D000228 ORTHO05D001545 2.5e-50 202.6 123 74.8
CSS0025979 Camellia sinensis var. sinensis HOM05D000228 ORTHO05D001545 4.2e-50 201.8 123 74.8
CSS0035598 Camellia sinensis var. sinensis HOM05D000228 ORTHO05D001545 4.2e-50 201.8 123 74.8
PSO017G3640 Papaver somniferum HOM05D000228 ORTHO05D001545 9.3e-50 200.7 123 74.8
Eucgr.J02108 Eucalyptus grandis HOM05D000228 ORTHO05D001545 3.5e-49 198.7 130 73.1
Nn2g12369 Nelumbo nucifera HOM05D000228 ORTHO05D001545 3.5e-49 198.7 123 74.8
FvH4_3g34290 Fragaria vesca HOM05D000228 ORTHO05D001545 7.9e-49 197.6 155 61.9
Mapoly0051s0017 Marchantia polymorpha HOM05D000228 ORTHO05D001545 1.3e-48 196.8 125 78.4
Sed0007851 Sechium edule HOM05D000228 ORTHO05D001545 1.3e-48 196.8 129 72.1
Sc19g0005360 Simmondsia chinensis HOM05D000228 ORTHO05D001545 1.3e-48 196.8 153 64.7
Pp3c17_4860 Physcomitrium patens HOM05D000228 ORTHO05D001545 1.8e-48 196.4 147 66.7
Nitab4.5_0004015g0070 Nicotiana tabacum HOM05D000228 ORTHO05D001545 2.3e-48 196.1 118 75.4
Nitab4.5_0004839g0020 Nicotiana tabacum HOM05D000228 ORTHO05D001545 2.3e-48 196.1 118 75.4
Zm00001eb078830 Zea mays HOM05D000228 ORTHO05D001545 3.9e-48 195.3 177 57.6
CANSAT56G4454 Cannabis sativa HOM05D000228 ORTHO05D001545 5.1e-48 194.9 154 63.0
CAN.G1190.18 Capsicum annuum HOM05D000228 ORTHO05D001545 5.1e-48 194.9 123 74.0
RcHm_v2.0_Chr5g0061861 Rosa chinensis HOM05D000228 ORTHO05D001545 5.1e-48 194.9 155 61.3
Aqoxy4G03124 Aquilegia oxysepala HOM05D000228 ORTHO05D001545 6.7e-48 194.5 123 74.0
Thhalv10012446m.g Eutrema salsugineum HOM05D000228 ORTHO05D001545 6.7e-48 194.5 150 65.3
FAN11G3166 Fragaria x ananassa HOM05D000228 ORTHO05D001545 6.7e-48 194.5 155 61.3
Cfa011405 Carpinus fangiana HOM05D000228 ORTHO05D001545 1.1e-47 193.7 164 61.0
COL.COLO4_14804 Corchorus olitorius HOM05D000228 ORTHO05D001545 1.1e-47 193.7 134 69.4
MELO3C026854.2 Cucumis melo HOM05D000228 ORTHO05D001545 1.1e-47 193.7 129 72.1
MD03G1106800 Malus domestica HOM05D000228 ORTHO05D001545 1.1e-47 193.7 153 60.8
THA.LOC104810826 Tarenaya hassleriana HOM05D000228 ORTHO05D001545 1.5e-47 193.4 152 62.5
AagrBONN_evm.TU.Sc2ySwM_362.2196 Anthoceros agrestis HOM05D000228 ORTHO05D001545 1.9e-47 193.0 146 66.4
EL10Ac1g02243 Beta vulgaris HOM05D000228 ORTHO05D001545 1.9e-47 193.0 158 63.9
CsaV3_1G012790 Cucumis sativus L. HOM05D000228 ORTHO05D001545 1.9e-47 193.0 129 71.3
Sopen11g030400 Solanum pennellii HOM05D000228 ORTHO05D001545 1.9e-47 193.0 123 72.4
EL10Ac3g06609 Beta vulgaris HOM05D000228 ORTHO05D001545 2.5e-47 192.6 153 63.4
AUR62025018 Chenopodium quinoa HOM05D000228 ORTHO05D001545 2.5e-47 192.6 158 61.4
Haze_23976 Corylus avellana HOM05D000228 ORTHO05D001545 2.5e-47 192.6 164 60.4
DCAR_018871 Daucus carota HOM05D000228 ORTHO05D001545 3.3e-47 192.2 123 72.4
Prupe.6G089600 Prunus persica HOM05D000228 ORTHO05D001545 3.3e-47 192.2 152 61.2
PGR119G1503 Punica granatum HOM05D000228 ORTHO05D001545 3.3e-47 192.2 130 71.5
SMO143G0104 Selaginella moellendorffii HOM05D000228 ORTHO05D001545 3.3e-47 192.2 118 72.9
Cpa.g.sc7.210 Carica papaya HOM05D000228 ORTHO05D001545 4.3e-47 191.8 152 59.9
Cc00_g14860 Coffea canephora HOM05D000228 ORTHO05D001545 4.3e-47 191.8 157 62.4
Potri.001G341900 Populus trichocarpa HOM05D000228 ORTHO05D001545 4.3e-47 191.8 130 69.2
Carub.0008s2074 Capsella rubella HOM05D000228 ORTHO05D001545 5.7e-47 191.4 152 62.5
HanXRQChr08g0230641 Helianthus annuus HOM05D000228 ORTHO05D001545 5.7e-47 191.4 130 73.8
TWI75G1460 Tripterygium wilfordii HOM05D000228 ORTHO05D001545 5.7e-47 191.4 129 69.0
ECA233G4378 Erigeron canadensis HOM05D000228 ORTHO05D001545 7.4e-47 191.0 130 70.8
Lsat_1_v5_gn_9_21100 Lactuca sativa HOM05D000228 ORTHO05D001545 7.4e-47 191.0 130 73.1
QL93p0200_0051 Quercus lobata HOM05D000228 ORTHO05D001545 7.4e-47 191.0 130 72.3
GSVIVG01025079001 Vitis vinifera HOM05D000228 ORTHO05D001545 7.4e-47 191.0 125 72.0
ClCG03G002140 Citrullus lanatus HOM05D000228 ORTHO05D001545 9.7e-47 190.7 123 72.4
AL8G36630 Arabidopsis lyrata HOM05D000228 ORTHO05D001545 1.3e-46 190.3 127 72.4
CiPaw.14G074800 Carya illinoinensis HOM05D000228 ORTHO05D001545 1.3e-46 190.3 130 71.5
Solyc11g072730.2 Solanum lycopersicum HOM05D000228 ORTHO05D001545 1.6e-46 189.9 123 71.5
AT5G60040 Arabidopsis thaliana HOM05D000228 ORTHO05D001545 2.2e-46 189.5 127 71.7
Manes.17G000400 Manihot esculenta HOM05D000228 ORTHO05D001545 2.2e-46 189.5 130 71.5
SGA_v2.0_scaffold110G31200 Striga asiatica HOM05D000228 ORTHO05D001545 2.8e-46 189.1 140 65.0
Aa31LG1G12160 Aethionema arabicum HOM05D000228 ORTHO05D001545 3.7e-46 188.7 121 71.9
CARHR273660 Cardamine hirsuta HOM05D000228 ORTHO05D001545 3.7e-46 188.7 126 71.4
arahy.Tifrunner.gnm1.ann1.NH5KQA Arachis hypogaea HOM05D000228 ORTHO05D001545 4.8e-46 188.3 158 58.9
Os04g0492300 Oryza sativa ssp. japonica HOM05D000228 ORTHO05D001545 4.8e-46 188.3 129 70.5
arahy.Tifrunner.gnm1.ann1.E1FMMY Arachis hypogaea HOM05D000228 ORTHO05D001545 6.3e-46 188.0 158 58.2
ECA247G0560 Erigeron canadensis HOM05D000228 ORTHO05D001545 6.3e-46 188.0 130 70.8
QL06p007447 Quercus lobata HOM05D000228 ORTHO05D001545 6.3e-46 188.0 124 73.4
Sabra16G0221600 Salix brachista HOM05D000228 ORTHO05D001545 6.3e-46 188.0 130 69.2
Thecc.03G012000 Theobroma cacao HOM05D000228 ORTHO05D001545 6.3e-46 188.0 134 67.9
Atru.chr3.3761 Acer truncatum HOM05D000228 ORTHO05D001545 8.2e-46 187.6 162 59.9
Lj8A494T11 Lonicera japonica HOM05D000228 ORTHO05D021177 8.2e-46 187.6 136 66.2
A02p06630 Brassica napus HOM05D000228 ORTHO05D001545 1.1e-45 187.2 151 62.9
C02p11920 Brassica napus HOM05D000228 ORTHO05D001545 1.1e-45 187.2 151 62.9
Peaxi162Scf00616g00511 Petunia axillaris HOM05D000228 ORTHO05D001545 1.1e-45 187.2 151 58.9
HanXRQChr04g0106851 Helianthus annuus HOM05D000228 ORTHO05D001545 1.8e-45 186.4 130 69.2
MD09G1157000 Malus domestica HOM05D000228 ORTHO05D001545 1.8e-45 186.4 155 58.7
BcaB05g22610 Brassica carinata HOM05D000228 ORTHO05D001545 3.1e-45 185.7 126 70.6
COL.COLO4_18403 Corchorus olitorius HOM05D000228 ORTHO05D001545 3.1e-45 185.7 134 67.9
Duzib150G0751 Durio zibethinus HOM05D000228 ORTHO05D001545 3.1e-45 185.7 134 66.4
Lj1g0011731 Lotus japonicus HOM05D000228 ORTHO05D001545 3.1e-45 185.7 130 67.7
FvH4_6g15630 Fragaria vesca HOM05D000228 ORTHO05D001545 4.1e-45 185.3 155 58.7
FAN16G3688 Fragaria x ananassa HOM05D000228 ORTHO05D001545 4.1e-45 185.3 176 54.5
FAN21G2820 Fragaria x ananassa HOM05D000228 ORTHO05D001545 4.1e-45 185.3 176 54.5
HPP92_005963 Vanilla planifolia HOM05D000228 ORTHO05D001545 4.1e-45 185.3 126 71.4
Gorai.003G139100 Gossypium raimondii HOM05D000228 ORTHO05D001545 6.9e-45 184.5 134 64.9
FAN14G3914 Fragaria x ananassa HOM05D000228 ORTHO05D001545 9.0e-45 184.1 155 58.1
Sp6g21700 Schrenkiella parvula HOM05D000228 ORTHO05D001545 9.0e-45 184.1 126 71.4
Gohir.D03G132200 Gossypium hirsutum HOM05D000228 ORTHO05D001545 1.2e-44 183.7 134 64.2
Atru.chr3.3763 Acer truncatum HOM05D000228 ORTHO05D001545 1.5e-44 183.3 162 58.6
Glyma.11G147317 Glycine max HOM05D000228 ORTHO05D001545 1.5e-44 183.3 132 64.4
Lalb_Chr01g0003921 Lupinus albus HOM05D000228 ORTHO05D001545 2.0e-44 183.0 130 66.2
Medtr4g061700 Medicago truncatula HOM05D000228 ORTHO05D001545 2.6e-44 182.6 130 66.9
Medtr4g061800 Medicago truncatula HOM05D000228 ORTHO05D001545 3.4e-44 182.2 130 65.4
Ca_19216_v3 Cicer arietinum L. HOM05D000228 ORTHO05D001545 5.9e-44 181.4 130 65.4
Gohir.A03G036100 Gossypium hirsutum HOM05D000228 ORTHO05D001545 5.9e-44 181.4 134 63.4
Psat7g221400 Pisum sativum HOM05D000228 ORTHO05D001545 1.0e-43 180.6 130 66.2
Dinv27602 Davidia involucrata HOM05D000228 ORTHO05D001545 1.3e-43 180.3 115 75.7
Phvul.011G070100 Phaseolus vulgaris HOM05D000228 ORTHO05D001545 1.3e-43 180.3 129 65.9
vmacro12980 Vaccinium macrocarpon HOM05D000228 ORTHO05D001545 1.3e-43 180.3 168 55.4
Ah.04g153590 Amaranthus hybridus HOM05D000228 ORTHO05D001545 2.9e-43 179.1 153 59.5
TPR.G2993 Trifolium pratense HOM05D000228 ORTHO05D001545 6.5e-43 177.9 155 57.4
VMungo1127G1617 Vigna mungo HOM05D000228 ORTHO05D001545 8.5e-43 177.6 129 64.3
BraA02t05745Z Brassica rapa HOM05D000228 ORTHO05D001545 1.4e-42 176.8 167 56.9
BolC2t07289H Brassica oleracea HOM05D000228 ORTHO05D001545 3.2e-42 175.6 142 62.7
MCO05G255 Micromonas commoda HOM05D000228 ORTHO05D001545 1.8e-37 159.8 126 62.7
AUR62006512 Chenopodium quinoa HOM05D000228 ORTHO05D001545 4.1e-37 158.7 140 58.6
Cre03.g165750 Chlamydomonas reinhardtii HOM05D000228 ORTHO05D001545 3.4e-36 155.6 144 55.6
Lj3A239G19 Lonicera japonica HOM05D000228 ORTHO05D001545 2.9e-35 152.5 119 62.2
Ciclev10027681m.g Citrus clementina HOM05D000228 ORTHO05D001545 2.5e-34 149.4 162 51.2
Lsat_1_v5_gn_2_6980 Lactuca sativa HOM05D000228 ORTHO05D001545 5.5e-34 148.3 108 71.3
Aa31LG1G12170 Aethionema arabicum HOM05D000228 ORTHO05D001545 7.4e-31 137.9 96 71.9
Oeu047346.1 Olea europaea HOM05D000228 ORTHO05D001545 7.4e-31 137.9 94 68.1
TPR.G8519 Trifolium pratense HOM05D000228 ORTHO05D001545 2.2e-30 136.3 118 58.5
AUR62035701 Chenopodium quinoa HOM05D000228 ORTHO05D001545 1.2e-28 130.6 94 68.1
SHI06007 Sapria himalayana HOM05D000228 ORTHO05D001545 1.9e-26 123.2 107 56.1
vmacro14493 Vaccinium macrocarpon HOM05D000228 ORTHO05D001545 2.1e-25 119.8 85 67.1
CBR_g21008 Chara braunii HOM05D000228 ORTHO05D001545 8.0e-25 117.9 67 74.6
Haze_26119 Corylus avellana HOM05D000228 ORTHO05D001545 1.7e-22 110.2 111 46.8
FAN02G2221 Fragaria x ananassa HOM05D000228 ORTHO05D001545 4.1e-21 105.5 109 50.5
RcHm_v2.0_Chr3g0469321 Rosa chinensis HOM05D000228 ORTHO05D001545 5.0e-19 98.6 74 58.1
AagrBONN_evm.TU.Sc2ySwM_362.1872 Anthoceros agrestis HOM05D000228 ORTHO05D021177 1.6e-17 93.6 57 77.2
PRCOL_00001662 Prasinoderma coloniale HOM05D000228 ORTHO05D001545 6.1e-17 91.7 133 40.6
Cfa021868 Carpinus fangiana HOM05D000228 ORTHO05D001545 3.0e-16 89.4 112 40.2
Aa31LG1G12190 Aethionema arabicum HOM05D000228 ORTHO05D021177 1.4e-13 80.5 45 82.2
Peaxi162Scf00616g00621 Petunia axillaris HOM05D000228 ORTHO05D001545 1.4e-13 80.5 67 53.7
PGSC0003DMG401025354 Solanum tuberosum HOM05D000228 ORTHO05D021177 1.6e-12 77.0 46 76.1
CDE02G3052 Ceratophyllum demersum HOM05D000228 ORTHO05D001545 2.3e-08 63.2 36 80.6
ATR0661G313 Amborella trichopoda HOM05D000228 ORTHO05D001545 4.9e-06 55.5 95 36.8


User provided reference genes

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