Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_33476 Sequoiadendron giganteum HOM05D005942 ORTHO05D007209 1.6e-172 609.4 321 100.0
Mapoly0020s0016 Marchantia polymorpha HOM05D005942 ORTHO05D007209 4.4e-37 159.5 339 35.7
ATR0099G013 Amborella trichopoda HOM05D005942 ORTHO05D007209 2.9e-36 156.8 219 44.7
QL05p000862 Quercus lobata HOM05D005942 ORTHO05D007209 1.2e-34 151.4 219 43.4
QL05p001132 Quercus lobata HOM05D005942 ORTHO05D007209 1.2e-34 151.4 219 43.4
Cfa003459 Carpinus fangiana HOM05D005942 ORTHO05D007209 4.6e-34 149.4 164 49.4
Manes.04G151100 Manihot esculenta HOM05D005942 ORTHO05D007209 6.0e-34 149.1 186 47.8
Thecc.06G130500 Theobroma cacao HOM05D005942 ORTHO05D007209 6.0e-34 149.1 211 42.7
COL.COLO4_30871 Corchorus olitorius HOM05D005942 ORTHO05D007209 1.3e-33 147.9 143 54.5
Potri.003G073000 Populus trichocarpa HOM05D005942 ORTHO05D007209 1.3e-33 147.9 136 56.6
Pp3c10_6430 Physcomitrium patens HOM05D005942 ORTHO05D007209 1.7e-33 147.5 209 44.0
Haze_16138 Corylus avellana HOM05D005942 ORTHO05D007209 3.0e-33 146.7 164 48.8
TAR624G0006 Trochodendron aralioides HOM05D005942 ORTHO05D007209 5.1e-33 146.0 207 43.0
GSVIVG01016664001 Vitis vinifera HOM05D005942 ORTHO05D007209 8.6e-33 145.2 258 39.9
MELO3C024305.2 Cucumis melo HOM05D005942 ORTHO05D007209 1.1e-32 144.8 127 55.1
TWI14G0802 Tripterygium wilfordii HOM05D005942 ORTHO05D007209 1.5e-32 144.4 241 38.2
Hma1.2p1_0090F.1_g045800 Hydrangea macrophylla HOM05D005942 ORTHO05D007209 5.6e-32 142.5 127 53.5
Dinv37817 Davidia involucrata HOM05D005942 ORTHO05D007209 9.6e-32 141.7 158 49.4
CSS0026354 Camellia sinensis var. sinensis HOM05D005942 ORTHO05D007209 1.2e-31 141.4 154 48.7
FvH4_6g35860 Fragaria vesca HOM05D005942 ORTHO05D007209 1.2e-31 141.4 124 56.5
FAN09G3780 Fragaria x ananassa HOM05D005942 ORTHO05D007209 1.2e-31 141.4 124 56.5
RcHm_v2.0_Chr2g0147901 Rosa chinensis HOM05D005942 ORTHO05D007209 1.6e-31 141.0 156 49.4
Sed0028190 Sechium edule HOM05D005942 ORTHO05D007209 3.6e-31 139.8 222 40.5
Ciclev10024928m.g Citrus clementina HOM05D005942 ORTHO05D007209 6.2e-31 139.0 260 36.2
Eucgr.J02595 Eucalyptus grandis HOM05D005942 ORTHO05D007209 6.2e-31 139.0 127 54.3
FAN02G3526 Fragaria x ananassa HOM05D005942 ORTHO05D007209 6.2e-31 139.0 124 55.6
FAN14G4637 Fragaria x ananassa HOM05D005942 ORTHO05D007209 6.2e-31 139.0 124 55.6
MBI13_g01657_MAGBIO Magnolia biondii HOM05D005942 ORTHO05D007209 6.2e-31 139.0 313 32.9
Gohir.D05G144100 Gossypium hirsutum HOM05D005942 ORTHO05D007209 8.1e-31 138.7 212 41.0
Gorai.009G148000 Gossypium raimondii HOM05D005942 ORTHO05D007209 8.1e-31 138.7 212 41.0
Sabra03G0043700 Salix brachista HOM05D005942 ORTHO05D007209 8.1e-31 138.7 226 41.2
Gohir.A05G141800 Gossypium hirsutum HOM05D005942 ORTHO05D007209 1.4e-30 137.9 185 42.7
PSO170G5566 Papaver somniferum HOM05D005942 ORTHO05D007209 1.4e-30 137.9 248 39.9
Rhsim08G0245000 Rhododendron simsii HOM05D005942 ORTHO05D007209 4.0e-30 136.3 209 38.8
FAN05G1996 Fragaria x ananassa HOM05D005942 ORTHO05D007209 5.2e-30 136.0 156 47.4
Lj9C538T8 Lonicera japonica HOM05D005942 ORTHO05D007209 5.2e-30 136.0 242 38.4
PSO017G1617 Papaver somniferum HOM05D005942 ORTHO05D007209 6.8e-30 135.6 232 39.7
Peaxi162Scf00038g02336 Petunia axillaris HOM05D005942 ORTHO05D007209 8.9e-30 135.2 220 39.1
Actinidia24424 Actinidia chinensis HOM05D005942 ORTHO05D007209 1.2e-29 134.8 154 49.4
CANSAT56G3801 Cannabis sativa HOM05D005942 ORTHO05D007209 1.2e-29 134.8 164 45.1
Nn3g21985 Nelumbo nucifera HOM05D005942 ORTHO05D007209 1.5e-29 134.4 212 38.7
Duzib192G0321 Durio zibethinus HOM05D005942 ORTHO05D007209 2.0e-29 134.0 211 39.8
unitig_62.g23675 Utricularia gibba HOM05D005942 ORTHO05D007209 2.0e-29 134.0 212 41.0
CAN.G790.55 Capsicum annuum HOM05D005942 ORTHO05D007209 3.4e-29 133.3 217 39.6
Dinv20380 Davidia involucrata HOM05D005942 ORTHO05D007209 4.4e-29 132.9 154 47.4
HanXRQChr10g0311801 Helianthus annuus HOM05D005942 ORTHO05D007209 4.4e-29 132.9 128 51.6
MD09G1172500 Malus domestica HOM05D005942 ORTHO05D007209 5.8e-29 132.5 259 39.0
Medtr7g117545 Medicago truncatula HOM05D005942 ORTHO05D007209 9.9e-29 131.7 141 47.5
AUR62025613 Chenopodium quinoa HOM05D005942 ORTHO05D007209 1.3e-28 131.3 165 44.8
AUR62043501 Chenopodium quinoa HOM05D005942 ORTHO05D007209 1.3e-28 131.3 165 44.8
ClCG09G001410 Citrullus lanatus HOM05D005942 ORTHO05D007209 1.3e-28 131.3 221 38.5
Lsat_1_v5_gn_5_137681 Lactuca sativa HOM05D005942 ORTHO05D007209 1.3e-28 131.3 220 39.1
SalBow7G4809 Salvia bowleyana HOM05D005942 ORTHO05D007209 1.3e-28 131.3 215 39.1
AUR62001402 Chenopodium quinoa HOM05D005942 ORTHO05D007209 1.7e-28 131.0 165 45.5
PGSC0003DMG400009149 Solanum tuberosum HOM05D005942 ORTHO05D007209 2.2e-28 130.6 222 38.7
TPR.G28866 Trifolium pratense HOM05D005942 ORTHO05D007209 2.2e-28 130.6 141 46.8
Aa31LG4G2680 Aethionema arabicum HOM05D005942 ORTHO05D007209 2.9e-28 130.2 164 45.1
Aqoxy7G00926 Aquilegia oxysepala HOM05D005942 ORTHO05D007209 2.9e-28 130.2 221 38.5
CsaV3_7G033920 Cucumis sativus L. HOM05D005942 ORTHO05D007209 2.9e-28 130.2 220 37.7
ECA234G0243 Erigeron canadensis HOM05D005942 ORTHO05D007209 2.9e-28 130.2 172 45.9
Cpa.g.sc25.196 Carica papaya HOM05D005942 ORTHO05D007209 3.8e-28 129.8 211 38.4
PGR102G3180 Punica granatum HOM05D005942 ORTHO05D007209 3.8e-28 129.8 157 42.0
Sc12g0011030 Simmondsia chinensis HOM05D005942 ORTHO05D007209 4.9e-28 129.4 173 42.8
HPP92_016652 Vanilla planifolia HOM05D005942 ORTHO05D007209 4.9e-28 129.4 128 52.3
Prupe.3G030900 Prunus persica HOM05D005942 ORTHO05D007209 6.4e-28 129.0 257 38.5
BcaB03g14980 Brassica carinata HOM05D005942 ORTHO05D007209 1.1e-27 128.3 204 43.1
AT1G72320 Arabidopsis thaliana HOM05D005942 ORTHO05D007209 1.4e-27 127.9 243 34.6
Carub.0002s1918 Capsella rubella HOM05D005942 ORTHO05D007209 1.4e-27 127.9 239 36.0
Sopen03g041410 Solanum pennellii HOM05D005942 ORTHO05D007209 1.4e-27 127.9 222 38.3
HPP92_016647 Vanilla planifolia HOM05D005942 ORTHO05D007209 1.4e-27 127.9 128 51.6
Nitab4.5_0006338g0060 Nicotiana tabacum HOM05D005942 ORTHO05D007209 1.9e-27 127.5 220 36.8
MSTRG.10908 Avicennia marina HOM05D005942 ORTHO05D007209 2.4e-27 127.1 187 41.2
BcaC08g46688 Brassica carinata HOM05D005942 ORTHO05D007209 2.4e-27 127.1 206 41.3
C06p46680 Brassica napus HOM05D005942 ORTHO05D007209 2.4e-27 127.1 206 41.3
BolC6t39713H Brassica oleracea HOM05D005942 ORTHO05D007209 2.4e-27 127.1 206 41.3
Nitab4.5_0001873g0040 Nicotiana tabacum HOM05D005942 ORTHO05D007209 2.4e-27 127.1 220 36.8
Zm00001eb028000 Zea mays HOM05D005942 ORTHO05D007209 2.4e-27 127.1 255 34.9
AL2G32000 Arabidopsis lyrata HOM05D005942 ORTHO05D007209 4.2e-27 126.3 243 34.2
arahy.Tifrunner.gnm1.ann1.SXV5N5 Arachis hypogaea HOM05D005942 ORTHO05D007209 4.2e-27 126.3 136 47.1
Lalb_Chr15g0076691 Lupinus albus HOM05D005942 ORTHO05D007209 9.3e-27 125.2 188 39.9
A07p38500 Brassica napus HOM05D005942 ORTHO05D007209 1.2e-26 124.8 227 39.2
CiPaw.02G130800 Carya illinoinensis HOM05D005942 ORTHO05D007209 1.2e-26 124.8 260 35.0
Hund18636 Selenicereus undatus HOM05D005942 ORTHO05D007209 1.2e-26 124.8 176 42.6
Solyc03g123640.3 Solanum lycopersicum HOM05D005942 ORTHO05D007209 1.2e-26 124.8 222 37.8
CARHR065220 Cardamine hirsuta HOM05D005942 ORTHO05D007209 2.1e-26 124.0 229 38.9
Psat6g168240 Pisum sativum HOM05D005942 ORTHO05D007209 2.1e-26 124.0 141 45.4
Ca_07883_v3 Cicer arietinum L. HOM05D005942 ORTHO05D007209 2.7e-26 123.6 184 39.1
Ah.15g094920 Amaranthus hybridus HOM05D005942 ORTHO05D007209 3.5e-26 123.2 192 41.1
Migut.I01134 Erythranthe guttata HOM05D005942 ORTHO05D007209 4.6e-26 122.9 224 37.1
Thhalv10018182m.g Eutrema salsugineum HOM05D005942 ORTHO05D007209 4.6e-26 122.9 222 38.7
Glyma.03G263200 Glycine max HOM05D005942 ORTHO05D007209 4.6e-26 122.9 252 32.1
BraA07t31410Z Brassica rapa HOM05D005942 ORTHO05D007209 6.0e-26 122.5 220 40.5
EL10Ac7g16496 Beta vulgaris HOM05D005942 ORTHO05D007209 7.8e-26 122.1 178 42.1
THA.LOC104813965 Tarenaya hassleriana HOM05D005942 ORTHO05D007209 2.3e-25 120.6 222 39.6
SGA_v2.0_scaffold122G33306 Striga asiatica HOM05D005942 ORTHO05D007209 3.0e-25 120.2 207 35.3
arahy.Tifrunner.gnm1.ann1.UMP4HF Arachis hypogaea HOM05D005942 ORTHO05D007209 5.1e-25 119.4 246 34.1
DCAR_007660 Daucus carota HOM05D005942 ORTHO05D007209 5.1e-25 119.4 254 33.5
Sp5g27400 Schrenkiella parvula HOM05D005942 ORTHO05D007209 5.1e-25 119.4 213 38.5
CDE04G3550 Ceratophyllum demersum HOM05D005942 ORTHO05D007209 6.6e-25 119.0 260 34.6
VMungo1309G0067 Vigna mungo HOM05D005942 ORTHO05D007209 8.7e-25 118.6 256 33.2
AagrBONN_evm.TU.Sc2ySwM_369.233 Anthoceros agrestis HOM05D005942 ORTHO05D007209 2.5e-24 117.1 123 48.8
Cc04_g00670 Coffea canephora HOM05D005942 ORTHO05D007209 3.3e-24 116.7 217 37.3
Nitab4.5_0001873g0030 Nicotiana tabacum HOM05D005942 ORTHO05D007209 4.3e-24 116.3 201 36.8
Lj1g0014309 Lotus japonicus HOM05D005942 ORTHO05D007209 9.6e-24 115.2 259 32.8
Phvul.009G261600 Phaseolus vulgaris HOM05D005942 ORTHO05D007209 2.8e-23 113.6 257 32.7
Oeu019509.2 Olea europaea HOM05D005942 ORTHO05D007209 3.6e-23 113.2 97 53.6
CBR_g4864 Chara braunii HOM05D005942 ORTHO05D007209 6.9e-22 109.0 280 32.5
SMO118G0133 Selaginella moellendorffii HOM05D005942 ORTHO05D007209 4.9e-20 102.8 125 40.0
vmacro18719 Vaccinium macrocarpon HOM05D005942 ORTHO05D007209 2.1e-18 97.4 138 41.3
CAN.G635.26 Capsicum annuum HOM05D005942 ORTHO05D007209 3.9e-17 93.2 183 36.6
CAN.G635.25 Capsicum annuum HOM05D005942 ORTHO05D007209 6.6e-17 92.4 152 39.5
Atru.chr1.4156 Acer truncatum HOM05D005942 ORTHO05D007209 4.8e-15 86.3 228 33.8
Cre16.g649600 Chlamydomonas reinhardtii HOM05D005942 ORTHO05D007209 2.4e-14 84.0 115 38.3
CBR_g19531 Chara braunii HOM05D005942 ORTHO05D007209 4.5e-13 79.7 119 40.3
MCO05G275 Micromonas commoda HOM05D005942 ORTHO05D007209 2.4e-11 73.9 125 32.0
C02p29840 Brassica napus HOM05D005942 ORTHO05D007209 7.1e-11 72.4 74 51.4
BolC2t09032H Brassica oleracea HOM05D005942 ORTHO05D007209 1.2e-10 71.6 92 46.7
Sabra01G0130200 Salix brachista HOM05D005942 ORTHO05D007209 5.1e-09 66.2 141 32.6
Nitab4.5_0007678g0030 Nicotiana tabacum HOM05D005942 ORTHO05D007209 2.4e-06 57.4 170 30.0


User provided reference genes

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