Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_33189 Sequoiadendron giganteum HOM05D005206 ORTHO05D006219 0.0e+00 1159.8 579 100.0
MBI15_g34233_MAGBIO Magnolia biondii HOM05D005206 ORTHO05D006219 1.2e-178 630.6 616 55.5
Dinv30996 Davidia involucrata HOM05D005206 ORTHO05D006219 2.1e-178 629.8 566 58.1
arahy.Tifrunner.gnm1.ann1.05N2IU Arachis hypogaea HOM05D005206 ORTHO05D006219 3.6e-178 629.0 560 58.0
Nitab4.5_0000257g0230 Nicotiana tabacum HOM05D005206 ORTHO05D006219 1.0e-177 627.5 556 57.4
Potri.010G094800 Populus trichocarpa HOM05D005206 ORTHO05D006219 1.0e-177 627.5 557 58.0
Hma1.2p1_1049F.1_g251730 Hydrangea macrophylla HOM05D005206 ORTHO05D006219 5.1e-177 625.2 563 57.2
TAR371G0117 Trochodendron aralioides HOM05D005206 ORTHO05D006219 6.7e-177 624.8 570 57.4
Lalb_Chr09g0326511 Lupinus albus HOM05D005206 ORTHO05D006219 4.3e-176 622.1 590 54.7
CSS0048376 Camellia sinensis var. sinensis HOM05D005206 ORTHO05D006219 5.7e-176 621.7 568 56.7
GSVIVG01020174001 Vitis vinifera HOM05D005206 ORTHO05D006219 1.4e-174 617.1 563 56.7
Lj2g0017178 Lotus japonicus HOM05D005206 ORTHO05D006219 4.1e-174 615.5 563 54.7
ATR1149G100 Amborella trichopoda HOM05D005206 ORTHO05D006219 6.9e-174 614.8 556 56.1
Rhsim12G0124400 Rhododendron simsii HOM05D005206 ORTHO05D006219 9.1e-174 614.4 570 56.3
Sed0001006 Sechium edule HOM05D005206 ORTHO05D006219 3.4e-173 612.5 573 55.7
Sc11g0001370 Simmondsia chinensis HOM05D005206 ORTHO05D006219 5.9e-173 611.7 561 57.4
Migut.L01447 Erythranthe guttata HOM05D005206 ORTHO05D006219 7.7e-173 611.3 569 55.7
Glyma.02G065600 Glycine max HOM05D005206 ORTHO05D006219 7.7e-173 611.3 569 55.2
Nitab4.5_0005722g0070 Nicotiana tabacum HOM05D005206 ORTHO05D006219 1.0e-172 610.9 563 57.5
Nn4g22885 Nelumbo nucifera HOM05D005206 ORTHO05D006219 1.7e-172 610.1 573 55.8
TWI36G1721 Tripterygium wilfordii HOM05D005206 ORTHO05D006219 1.7e-172 610.1 579 55.4
arahy.Tifrunner.gnm1.ann1.U6W7RM Arachis hypogaea HOM05D005206 ORTHO05D006219 1.4e-171 607.1 591 54.0
Ciclev10031184m.g Citrus clementina HOM05D005206 ORTHO05D006219 1.4e-171 607.1 571 55.2
PSO832G4147 Papaver somniferum HOM05D005206 ORTHO05D006219 1.4e-171 607.1 581 54.7
EL10Ac8g20565 Beta vulgaris HOM05D005206 ORTHO05D006219 1.9e-171 606.7 560 56.2
Aqoxy3G03082 Aquilegia oxysepala HOM05D005206 ORTHO05D006219 4.2e-171 605.5 556 57.6
CAN.G1160.5 Capsicum annuum HOM05D005206 ORTHO05D006219 5.5e-171 605.1 566 55.8
PSO063G3522 Papaver somniferum HOM05D005206 ORTHO05D006219 9.4e-171 604.4 554 56.3
Phvul.004G071000 Phaseolus vulgaris HOM05D005206 ORTHO05D006219 9.4e-171 604.4 563 54.9
Sabra10G0067100 Salix brachista HOM05D005206 ORTHO05D006219 9.4e-171 604.4 586 54.3
THA.LOC104816736 Tarenaya hassleriana HOM05D005206 ORTHO05D006219 9.4e-171 604.4 561 54.7
vmacro16280 Vaccinium macrocarpon HOM05D005206 ORTHO05D006219 1.2e-170 604.0 584 55.1
CsaV3_5G031880 Cucumis sativus L. HOM05D005206 ORTHO05D006219 2.1e-170 603.2 558 55.0
Ah.03g132350 Amaranthus hybridus HOM05D005206 ORTHO05D006219 2.7e-170 602.8 571 54.5
Eucgr.B02561 Eucalyptus grandis HOM05D005206 ORTHO05D006219 6.1e-170 601.7 561 54.0
Lsat_1_v5_gn_9_83200 Lactuca sativa HOM05D005206 ORTHO05D006219 1.4e-169 600.5 562 55.3
Manes.01G196700 Manihot esculenta HOM05D005206 ORTHO05D006219 1.4e-169 600.5 569 56.4
Atru.chr11.1960 Acer truncatum HOM05D005206 ORTHO05D006219 2.3e-169 599.7 571 55.3
Thhalv10009477m.g Eutrema salsugineum HOM05D005206 ORTHO05D006219 2.3e-169 599.7 569 54.8
Actinidia15006 Actinidia chinensis HOM05D005206 ORTHO05D006219 1.1e-168 597.4 587 53.8
Lj3A1048T22 Lonicera japonica HOM05D005206 ORTHO05D006219 1.1e-168 597.4 571 55.2
FvH4_4g35030 Fragaria vesca HOM05D005206 ORTHO05D006219 2.0e-168 596.7 560 55.5
Medtr7g039450 Medicago truncatula HOM05D005206 ORTHO05D006219 2.0e-168 596.7 554 55.2
Medtr5g040170 Medicago truncatula HOM05D005206 ORTHO05D006219 4.4e-168 595.5 554 55.2
Dinv31107 Davidia involucrata HOM05D005206 ORTHO05D006219 5.7e-168 595.1 535 58.1
Gorai.002G164200 Gossypium raimondii HOM05D005206 ORTHO05D006219 7.4e-168 594.7 573 53.8
SalBow2G2775 Salvia bowleyana HOM05D005206 ORTHO05D006219 1.7e-167 593.6 571 55.7
CANSAT56G0905 Cannabis sativa HOM05D005206 ORTHO05D006219 3.7e-167 592.4 573 54.1
Thecc.02G242400 Theobroma cacao HOM05D005206 ORTHO05D006219 6.3e-167 591.7 567 55.2
Gohir.A01G141200 Gossypium hirsutum HOM05D005206 ORTHO05D006219 8.2e-167 591.3 573 54.6
CARHR010660 Cardamine hirsuta HOM05D005206 ORTHO05D006219 1.4e-166 590.5 571 54.3
RcHm_v2.0_Chr4g0444551 Rosa chinensis HOM05D005206 ORTHO05D006219 1.4e-166 590.5 560 54.6
BcaC07g38608 Brassica carinata HOM05D005206 ORTHO05D006219 5.3e-166 588.6 570 54.9
DCAR_007103 Daucus carota HOM05D005206 ORTHO05D006219 5.3e-166 588.6 576 53.5
QL03p062489 Quercus lobata HOM05D005206 ORTHO05D006219 9.1e-166 587.8 562 53.6
Sp1g09150 Schrenkiella parvula HOM05D005206 ORTHO05D006219 9.1e-166 587.8 572 54.4
Hund25315 Selenicereus undatus HOM05D005206 ORTHO05D006219 4.5e-165 585.5 573 53.9
MSTRG.7873 Avicennia marina HOM05D005206 ORTHO05D006219 5.9e-165 585.1 558 53.9
HanXRQChr16g0527551 Helianthus annuus HOM05D005206 ORTHO05D006219 2.2e-164 583.2 563 53.8
Aa31LG1G4440 Aethionema arabicum HOM05D005206 ORTHO05D006219 5.0e-164 582.0 559 54.9
Solyc05g006120.3 Solanum lycopersicum HOM05D005206 ORTHO05D006219 5.0e-164 582.0 573 53.6
Sopen05g002140 Solanum pennellii HOM05D005206 ORTHO05D006219 6.5e-164 581.6 573 53.2
Carub.0001s0995 Capsella rubella HOM05D005206 ORTHO05D006219 8.5e-164 581.3 571 53.9
Os06g0237200 Oryza sativa ssp. japonica HOM05D005206 ORTHO05D006219 2.1e-162 576.6 567 52.6
RcHm_v2.0_Chr4g0444541 Rosa chinensis HOM05D005206 ORTHO05D006219 8.0e-162 574.7 560 53.9
BcaC07g38570 Brassica carinata HOM05D005206 ORTHO05D006219 1.0e-161 574.3 571 53.8
C08p13780 Brassica napus HOM05D005206 ORTHO05D006219 1.0e-161 574.3 571 53.8
BraA08t35305Z Brassica rapa HOM05D005206 ORTHO05D006219 2.3e-161 573.2 571 53.6
C08p13760 Brassica napus HOM05D005206 ORTHO05D006219 4.0e-161 572.4 571 53.1
AUR62039408 Chenopodium quinoa HOM05D005206 ORTHO05D006219 6.7e-161 571.6 567 52.4
BolC8t49011H Brassica oleracea HOM05D005206 ORTHO05D006219 8.8e-161 571.2 571 53.8
SGA_v2.0_scaffold166G38340 Striga asiatica HOM05D005206 ORTHO05D006219 8.8e-161 571.2 663 47.8
ECA236G3606 Erigeron canadensis HOM05D005206 ORTHO05D006219 2.0e-160 570.1 549 52.6
FvH4_4g35010 Fragaria vesca HOM05D005206 ORTHO05D006219 7.5e-160 568.2 560 52.3
PGR119G2380 Punica granatum HOM05D005206 ORTHO05D006219 2.8e-159 566.2 574 53.3
Zm00001eb371940 Zea mays HOM05D005206 ORTHO05D006219 8.2e-159 564.7 567 51.9
A08p33920 Brassica napus HOM05D005206 ORTHO05D006219 5.3e-158 562.0 595 51.4
Peaxi162Scf00421g00833 Petunia axillaris HOM05D005206 ORTHO05D006219 5.3e-158 562.0 563 53.8
AagrBONN_evm.TU.Sc2ySwM_344.2272 Anthoceros agrestis HOM05D005206 ORTHO05D006219 1.5e-155 553.9 556 52.2
Gohir.D01G132600 Gossypium hirsutum HOM05D005206 ORTHO05D006219 4.2e-155 552.4 547 53.6
Pp3c15_19010 Physcomitrium patens HOM05D005206 ORTHO05D006219 4.7e-154 548.9 562 50.4
Haze_12137 Corylus avellana HOM05D005206 ORTHO05D006219 2.3e-153 546.6 613 49.4
Hund05954 Selenicereus undatus HOM05D005206 ORTHO05D006219 1.2e-152 544.3 584 51.5
Cfa009102 Carpinus fangiana HOM05D005206 ORTHO05D006219 5.7e-152 542.0 575 51.0
Duzib248G0782 Durio zibethinus HOM05D005206 ORTHO05D006219 9.1e-150 534.6 567 49.9
Ca_18093_v3 Cicer arietinum L. HOM05D005206 ORTHO05D006219 3.8e-148 529.3 543 52.1
TWI36G0196 Tripterygium wilfordii HOM05D005206 ORTHO05D006219 1.2e-146 524.2 508 54.3
AL1G21320 Arabidopsis lyrata HOM05D005206 ORTHO05D006219 1.0e-145 521.2 487 55.4
CiPaw.06G074900 Carya illinoinensis HOM05D005206 ORTHO05D006219 5.2e-145 518.8 356 68.3
TPR.G13491 Trifolium pratense HOM05D005206 ORTHO05D006219 6.8e-145 518.5 513 51.9
AT1G10520 Arabidopsis thaliana HOM05D005206 ORTHO05D006219 1.8e-142 510.4 510 52.7
unitig_748.g7742 Utricularia gibba HOM05D005206 ORTHO05D006219 7.7e-141 505.0 377 63.4
COL.COLO4_38096 Corchorus olitorius HOM05D005206 ORTHO05D006219 1.0e-140 504.6 528 51.7
SalBow2G3534 Salvia bowleyana HOM05D005206 ORTHO05D006219 1.9e-139 500.4 601 48.9
MELO3C034123.2 Cucumis melo HOM05D005206 ORTHO05D006219 4.7e-138 495.7 597 46.7
ClCG05G025020 Citrullus lanatus HOM05D005206 ORTHO05D006219 3.0e-137 493.0 559 48.5
Mapoly0057s0101 Marchantia polymorpha HOM05D005206 ORTHO05D006219 1.2e-136 491.1 488 53.7
Psat2g114280 Pisum sativum HOM05D005206 ORTHO05D006219 3.2e-134 483.0 485 51.5
FAN12G3755 Fragaria x ananassa HOM05D005206 ORTHO05D006219 3.3e-131 473.0 560 47.7
SMO353G0008 Selaginella moellendorffii HOM05D005206 ORTHO05D006219 8.6e-124 448.4 342 63.5
FAN22G1639 Fragaria x ananassa HOM05D005206 ORTHO05D006219 3.3e-123 446.4 559 44.5
FAN12G3075 Fragaria x ananassa HOM05D005206 ORTHO05D006219 2.0e-120 437.2 576 43.4
MD16G1086700 Malus domestica HOM05D005206 ORTHO05D006219 5.4e-118 429.1 271 70.8
AL1G24280 Arabidopsis lyrata HOM05D005206 ORTHO05D006219 5.1e-116 422.5 275 70.9
CBR_g3482 Chara braunii HOM05D005206 ORTHO05D006219 3.1e-113 413.3 320 58.8
Prupe.1G259900 Prunus persica HOM05D005206 ORTHO05D006219 3.1e-113 413.3 449 48.3
CDE07G1306 Ceratophyllum demersum HOM05D005206 ORTHO05D006219 1.6e-98 364.4 539 42.5
Oeu025446.1 Olea europaea HOM05D005206 ORTHO05D006219 1.6e-93 347.8 397 48.9
AUR62026580 Chenopodium quinoa HOM05D005206 ORTHO05D006219 1.5e-91 341.3 236 66.5
QL03p062590 Quercus lobata HOM05D005206 ORTHO05D006219 9.0e-89 332.0 550 39.5
Cc11_g14230 Coffea canephora HOM05D005206 ORTHO05D006219 2.4e-86 323.9 387 47.3
Mapoly0078s0005 Marchantia polymorpha HOM05D005206 ORTHO05D006219 1.1e-81 308.5 558 33.9
AagrBONN_evm.TU.Sc2ySwM_362.251 Anthoceros agrestis HOM05D005206 ORTHO05D006219 2.6e-80 303.9 497 37.8
HPP92_017067 Vanilla planifolia HOM05D005206 ORTHO05D006219 1.1e-78 298.5 389 46.5
PGSC0003DMG400015600 Solanum tuberosum HOM05D005206 ORTHO05D006219 4.2e-78 296.6 185 73.5
CBR_g48616 Chara braunii HOM05D005206 ORTHO05D006219 7.1e-78 295.8 514 34.2
FAN07G1959 Fragaria x ananassa HOM05D005206 ORTHO05D006219 2.7e-77 293.9 270 54.4
Cc11_g14240 Coffea canephora HOM05D005206 ORTHO05D006219 2.3e-76 290.8 185 70.3
HPP92_017072 Vanilla planifolia HOM05D005206 ORTHO05D006219 1.1e-70 271.9 173 72.3
SHI08107 Sapria himalayana HOM05D005206 ORTHO05D006219 9.3e-70 268.9 429 39.4
SMO235G0045 Selaginella moellendorffii HOM05D005206 ORTHO05D006219 1.8e-68 264.6 312 42.0
SMO347G0124 Selaginella moellendorffii HOM05D005206 ORTHO05D006219 1.2e-61 241.9 319 38.9
FAN17G0295 Fragaria x ananassa HOM05D005206 ORTHO05D006219 3.2e-54 217.2 153 66.0
Cpa.g.sc5.345 Carica papaya HOM05D005206 ORTHO05D006219 3.6e-53 213.8 140 68.6
Cpa.g.sc5.348 Carica papaya HOM05D005206 ORTHO05D006219 1.9e-46 191.4 124 71.0
MD16G1086600 Malus domestica HOM05D005206 ORTHO05D006219 1.4e-44 185.3 293 38.2
AUR62026578 Chenopodium quinoa HOM05D005206 ORTHO05D006219 6.7e-44 183.0 292 38.7
Cpa.g.sc5.344 Carica papaya HOM05D005206 ORTHO05D006219 2.0e-43 181.4 288 40.3
Cfa026399 Carpinus fangiana HOM05D005206 ORTHO05D006219 4.4e-43 180.3 358 34.1
VMungo0464G1917 Vigna mungo HOM05D005206 ORTHO05D006219 2.2e-42 177.9 302 36.8
PRCOL_00003765 Prasinoderma coloniale HOM05D005206 ORTHO05D006219 1.8e-36 158.3 491 25.1
SHI08109 Sapria himalayana HOM05D005206 ORTHO05D006219 8.3e-34 149.4 122 57.4
MCO16G526 Micromonas commoda HOM05D005206 ORTHO05D006219 1.1e-33 149.1 377 27.3
HPP92_017071 Vanilla planifolia HOM05D005206 ORTHO05D006219 2.4e-33 147.9 258 39.9
VMungo0464G2026 Vigna mungo HOM05D005206 ORTHO05D006219 1.7e-31 141.7 99 66.7
FvH4_6g23350 Fragaria vesca HOM05D005206 ORTHO05D006219 3.7e-26 124.0 82 64.6
FvH4_5g07370 Fragaria vesca HOM05D003058 ORTHO05D003464 5.7e-19 100.1 101 49.5
RcHm_v2.0_Chr3g0484611 Rosa chinensis HOM05D005206 ORTHO05D006219 2.4e-17 94.7 60 68.3
HPP92_017068 Vanilla planifolia HOM05D005206 ORTHO05D006219 4.6e-16 90.5 59 67.8
Cre17.g716101 Chlamydomonas reinhardtii HOM05D005206 ORTHO05D006219 2.3e-15 88.2 191 29.8
Ca_04200_v3 Cicer arietinum L. HOM05D005206 ORTHO05D006219 2.8e-13 81.3 62 58.1
RcHm_v2.0_Chr4g0401081 Rosa chinensis HOM05D005206 ORTHO05D006219 5.6e-06 57.0 39 64.1


User provided reference genes

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