Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_32354 Sequoiadendron giganteum HOM05D000276 ORTHO05D003951 7.8e-82 307.0 146 100.0
arahy.Tifrunner.gnm1.ann1.8U6QA2 Arachis hypogaea HOM05D000276 ORTHO05D003951 5.5e-11 71.6 44 72.7
arahy.Tifrunner.gnm1.ann1.YW1SJ5 Arachis hypogaea HOM05D000276 ORTHO05D003951 5.5e-11 71.6 44 72.7
Aqoxy3G00127 Aquilegia oxysepala HOM05D000276 ORTHO05D003951 7.2e-11 71.2 44 70.5
PSO384G3966 Papaver somniferum HOM05D000276 ORTHO05D003951 3.6e-10 68.9 44 72.7
Actinidia21835 Actinidia chinensis HOM05D000276 ORTHO05D003951 4.7e-10 68.6 44 70.5
Actinidia24430 Actinidia chinensis HOM05D000276 ORTHO05D003951 4.7e-10 68.6 44 70.5
ATR0099G004 Amborella trichopoda HOM05D000276 ORTHO05D003951 4.7e-10 68.6 44 70.5
CSS0012252 Camellia sinensis var. sinensis HOM05D000276 ORTHO05D003951 4.7e-10 68.6 44 70.5
CAN.G702.39 Capsicum annuum HOM05D000276 ORTHO05D003951 4.7e-10 68.6 44 70.5
Cpa.g.sc53.32 Carica papaya HOM05D000276 ORTHO05D003951 4.7e-10 68.6 44 70.5
Ciclev10026377m.g Citrus clementina HOM05D000276 ORTHO05D003951 4.7e-10 68.6 44 70.5
Cc04_g00740 Coffea canephora HOM05D000276 ORTHO05D003951 4.7e-10 68.6 44 70.5
MELO3C021746.2 Cucumis melo HOM05D000276 ORTHO05D003951 4.7e-10 68.6 44 70.5
CsaV3_1G046270 Cucumis sativus L. HOM05D000276 ORTHO05D003951 4.7e-10 68.6 44 70.5
Dinv20385 Davidia involucrata HOM05D000276 ORTHO05D003951 4.7e-10 68.6 44 70.5
Duzib235G0618 Durio zibethinus HOM05D000276 ORTHO05D003951 4.7e-10 68.6 44 70.5
ECA236G2132 Erigeron canadensis HOM05D000276 ORTHO05D003951 4.7e-10 68.6 44 70.5
Glyma.02G013600 Glycine max HOM05D000276 ORTHO05D003951 4.7e-10 68.6 44 70.5
Glyma.10G014300 Glycine max HOM05D000276 ORTHO05D003951 4.7e-10 68.6 44 70.5
Glyma.10G279900 Glycine max HOM05D000276 ORTHO05D003951 4.7e-10 68.6 44 70.5
Glyma.20G109600 Glycine max HOM05D000276 ORTHO05D003951 4.7e-10 68.6 44 70.5
Gohir.A10G047574 Gossypium hirsutum HOM05D000276 ORTHO05D003951 4.7e-10 68.6 44 70.5
Gohir.D06G148600 Gossypium hirsutum HOM05D000276 ORTHO05D003951 4.7e-10 68.6 44 70.5
Gohir.D10G051800 Gossypium hirsutum HOM05D000276 ORTHO05D003951 4.7e-10 68.6 44 70.5
Gorai.010G173100 Gossypium raimondii HOM05D000276 ORTHO05D003951 4.7e-10 68.6 44 70.5
Gorai.011G055300 Gossypium raimondii HOM05D000276 ORTHO05D003951 4.7e-10 68.6 44 70.5
HanXRQChr09g0277241 Helianthus annuus HOM05D000276 ORTHO05D003951 4.7e-10 68.6 44 70.5
HanXRQChr15g0497281 Helianthus annuus HOM05D000276 ORTHO05D003951 4.7e-10 68.6 44 70.5
Lsat_1_v5_gn_4_92300 Lactuca sativa HOM05D000276 ORTHO05D003951 4.7e-10 68.6 44 70.5
Lj5A29G59 Lonicera japonica HOM05D000276 ORTHO05D003951 4.7e-10 68.6 44 70.5
Lj9C538G5 Lonicera japonica HOM05D000276 ORTHO05D003951 4.7e-10 68.6 44 70.5
MBI11_g31350_MAGBIO Magnolia biondii HOM05D000276 ORTHO05D003951 4.7e-10 68.6 44 70.5
Nn8g38517 Nelumbo nucifera HOM05D000276 ORTHO05D003951 4.7e-10 68.6 44 70.5
Nitab4.5_0000206g0110 Nicotiana tabacum HOM05D000276 ORTHO05D003951 4.7e-10 68.6 44 70.5
Nitab4.5_0002275g0050 Nicotiana tabacum HOM05D000276 ORTHO05D003951 4.7e-10 68.6 44 70.5
Os11g0615700 Oryza sativa ssp. japonica HOM05D000276 ORTHO05D003951 4.7e-10 68.6 44 72.7
PSO339G1994 Papaver somniferum HOM05D000276 ORTHO05D003951 4.7e-10 68.6 44 70.5
Peaxi162Scf00443g00058 Petunia axillaris HOM05D000276 ORTHO05D003951 4.7e-10 68.6 44 70.5
Phvul.007G021000 Phaseolus vulgaris HOM05D000276 ORTHO05D003951 4.7e-10 68.6 44 70.5
Sed0004881 Sechium edule HOM05D000276 ORTHO05D003951 4.7e-10 68.6 44 70.5
SMO116G0213 Selaginella moellendorffii HOM05D000276 ORTHO05D003951 4.7e-10 68.6 44 68.2
Hund22111 Selenicereus undatus HOM05D000276 ORTHO05D003951 4.7e-10 68.6 44 68.2
Solyc02g070510.3 Solanum lycopersicum HOM05D000276 ORTHO05D003951 4.7e-10 68.6 44 70.5
Sopen02g019600 Solanum pennellii HOM05D000276 ORTHO05D003951 4.7e-10 68.6 44 70.5
PGSC0003DMG400021163 Solanum tuberosum HOM05D000276 ORTHO05D003951 4.7e-10 68.6 44 70.5
TWI14G0620 Tripterygium wilfordii HOM05D000276 ORTHO05D003951 4.7e-10 68.6 44 70.5
TWI59G0435 Tripterygium wilfordii HOM05D000276 ORTHO05D003951 4.7e-10 68.6 44 70.5
TAR383G0174 Trochodendron aralioides HOM05D000276 ORTHO05D003951 4.7e-10 68.6 44 70.5
VMungo0720G2877 Vigna mungo HOM05D000276 ORTHO05D003951 4.7e-10 68.6 44 70.5
GSVIVG01016670001 Vitis vinifera HOM05D000276 ORTHO05D003951 4.7e-10 68.6 44 70.5
Zm00001eb004030 Zea mays HOM05D000276 ORTHO05D003951 4.7e-10 68.6 44 72.7
Zm00001eb403050 Zea mays HOM05D000276 ORTHO05D003951 4.7e-10 68.6 44 72.7
EL10Ac1g01933 Beta vulgaris HOM05D000276 ORTHO05D003951 6.1e-10 68.2 44 68.2
CANSAT11G1141 Cannabis sativa HOM05D000276 ORTHO05D003951 6.1e-10 68.2 44 68.2
CBR_g4752 Chara braunii HOM05D000276 ORTHO05D003951 6.1e-10 68.2 44 68.2
ClCG01G009510 Citrullus lanatus HOM05D000276 ORTHO05D003951 6.1e-10 68.2 44 70.5
Gohir.A06G143600 Gossypium hirsutum HOM05D000276 ORTHO05D003951 6.1e-10 68.2 44 70.5
Gohir.A09G075700 Gossypium hirsutum HOM05D000276 ORTHO05D003951 6.1e-10 68.2 44 70.5
Gohir.D09G075400 Gossypium hirsutum HOM05D000276 ORTHO05D003951 6.1e-10 68.2 44 70.5
Gorai.006G090500 Gossypium raimondii HOM05D000276 ORTHO05D003951 6.1e-10 68.2 44 70.5
Manes.11G012800 Manihot esculenta HOM05D000276 ORTHO05D003951 6.1e-10 68.2 44 68.2
Nitab4.5_0011269g0010 Nicotiana tabacum HOM05D000276 ORTHO05D003951 6.1e-10 68.2 44 68.2
PGR119G1126 Punica granatum HOM05D000276 ORTHO05D003951 6.1e-10 68.2 44 70.5
Sabra01G0129800 Salix brachista HOM05D000276 ORTHO05D003951 6.1e-10 68.2 44 68.2
Sed0004367 Sechium edule HOM05D000276 ORTHO05D003951 6.1e-10 68.2 44 68.2
HPP92_005722 Vanilla planifolia HOM05D000276 ORTHO05D003951 6.1e-10 68.2 44 70.5
Atru.chr1.4143 Acer truncatum HOM05D000276 ORTHO05D003951 8.0e-10 67.8 44 68.2
MSTRG.10913 Avicennia marina HOM05D000276 ORTHO05D003951 8.0e-10 67.8 44 68.2
MSTRG.9541 Avicennia marina HOM05D000276 ORTHO05D003951 8.0e-10 67.8 44 68.2
EL10Ac3g05842 Beta vulgaris HOM05D000276 ORTHO05D003951 8.0e-10 67.8 44 68.2
Nn6g35730 Nelumbo nucifera HOM05D000276 ORTHO05D003951 8.0e-10 67.8 44 68.2
Nitab4.5_0000420g0120 Nicotiana tabacum HOM05D000276 ORTHO05D003951 8.0e-10 67.8 44 68.2
Nitab4.5_0006550g0010 Nicotiana tabacum HOM05D000276 ORTHO05D003951 8.0e-10 67.8 44 68.2
Peaxi162Scf01211g00143 Petunia axillaris HOM05D000276 ORTHO05D003951 8.0e-10 67.8 44 68.2
QL11p016515 Quercus lobata HOM05D000276 ORTHO05D003951 8.0e-10 67.8 44 68.2
Sc10g0008000 Simmondsia chinensis HOM05D000276 ORTHO05D003951 8.0e-10 67.8 44 68.2
Solyc08g016510.3 Solanum lycopersicum HOM05D000276 ORTHO05D003951 8.0e-10 67.8 44 68.2
Sopen08g006850 Solanum pennellii HOM05D000276 ORTHO05D003951 8.0e-10 67.8 44 68.2
PGSC0003DMG400009650 Solanum tuberosum HOM05D000276 ORTHO05D003951 8.0e-10 67.8 44 68.2
SGA_v2.0_scaffold122G33310 Striga asiatica HOM05D000276 ORTHO05D003951 8.0e-10 67.8 44 68.2
SGA_v2.0_scaffold68G22826 Striga asiatica HOM05D000276 ORTHO05D003951 8.0e-10 67.8 44 68.2
unitig_26.g8915 Utricularia gibba HOM05D000276 ORTHO05D003951 8.0e-10 67.8 44 68.2
Atru.chr1.4142 Acer truncatum HOM05D000276 ORTHO05D003951 1.0e-09 67.4 44 68.2
Ah.07g207780 Amaranthus hybridus HOM05D000276 ORTHO05D003951 1.0e-09 67.4 44 68.2
CiPaw.09G077000 Carya illinoinensis HOM05D000276 ORTHO05D003951 1.0e-09 67.4 44 68.2
CiPaw.10G064500 Carya illinoinensis HOM05D000276 ORTHO05D003951 1.0e-09 67.4 44 68.2
CDE04G3123 Ceratophyllum demersum HOM05D000276 ORTHO05D003951 1.0e-09 67.4 44 68.2
CDE06G0201 Ceratophyllum demersum HOM05D000276 ORTHO05D003951 1.0e-09 67.4 44 68.2
CDE06G2630 Ceratophyllum demersum HOM05D000276 ORTHO05D003951 1.0e-09 67.4 44 68.2
Ca_25673_v3 Cicer arietinum L. HOM05D000276 ORTHO05D003951 1.0e-09 67.4 44 68.2
Duzib160G0218 Durio zibethinus HOM05D000276 ORTHO05D003951 1.0e-09 67.4 44 68.2
Eucgr.J02596 Eucalyptus grandis HOM05D000276 ORTHO05D003951 1.0e-09 67.4 44 68.2
Lalb_Chr02g0143301 Lupinus albus HOM05D000276 ORTHO05D003951 1.0e-09 67.4 44 68.2
Lalb_Chr06g0163551 Lupinus albus HOM05D000276 ORTHO05D003951 1.0e-09 67.4 44 68.2
MD05G1251400 Malus domestica HOM05D000276 ORTHO05D003951 1.0e-09 67.4 44 68.2
MD10G1231900 Malus domestica HOM05D000276 ORTHO05D003951 1.0e-09 67.4 44 68.2
Medtr1g112250 Medicago truncatula HOM05D000276 ORTHO05D003951 1.0e-09 67.4 44 68.2
PSO135G0296 Papaver somniferum HOM05D000276 ORTHO05D003951 1.0e-09 67.4 44 65.9
PSO724G0266 Papaver somniferum HOM05D000276 ORTHO05D003951 1.0e-09 67.4 44 65.9
Phvul.007G215500 Phaseolus vulgaris HOM05D000276 ORTHO05D003951 1.0e-09 67.4 44 68.2
Psat6g231360 Pisum sativum HOM05D000276 ORTHO05D003951 1.0e-09 67.4 44 68.2
Prupe.4G112400 Prunus persica HOM05D000276 ORTHO05D003951 1.0e-09 67.4 44 68.2
Rhsim08G0244500 Rhododendron simsii HOM05D000276 ORTHO05D006204 1.0e-09 67.4 44 68.2
Rhsim12G0213200 Rhododendron simsii HOM05D000276 ORTHO05D003951 1.0e-09 67.4 44 68.2
RcHm_v2.0_Chr5g0020181 Rosa chinensis HOM05D000276 ORTHO05D003951 1.0e-09 67.4 44 68.2
TPR.G2495 Trifolium pratense HOM05D000276 ORTHO05D003951 1.0e-09 67.4 44 68.2
vmacro18766 Vaccinium macrocarpon HOM05D000276 ORTHO05D003951 1.0e-09 67.4 44 68.2
vmacro22014 Vaccinium macrocarpon HOM05D000276 ORTHO05D003951 1.0e-09 67.4 44 68.2
VMungo0720G0567 Vigna mungo HOM05D000276 ORTHO05D003951 1.0e-09 67.4 44 68.2
AUR62035123 Chenopodium quinoa HOM05D000276 ORTHO05D003951 1.4e-09 67.0 44 65.9
Potri.001G162900 Populus trichocarpa HOM05D000276 ORTHO05D003951 1.4e-09 67.0 44 65.9
Hma1.2p1_0229F.1_g097070 Hydrangea macrophylla HOM05D000276 ORTHO05D003951 1.8e-09 66.6 44 68.2
Nitab4.5_0001587g0010 Nicotiana tabacum HOM05D000276 ORTHO05D003951 1.8e-09 66.6 44 68.2
Sc15g0000810 Simmondsia chinensis HOM05D000276 ORTHO05D003951 1.8e-09 66.6 44 65.9
SGA_v2.0_scaffold71G23921 Striga asiatica HOM05D000276 ORTHO05D003951 1.8e-09 66.6 44 65.9
Aa31LG8G1560 Aethionema arabicum HOM05D000276 ORTHO05D003951 2.3e-09 66.2 44 65.9
AL1G62560 Arabidopsis lyrata HOM05D000276 ORTHO05D003951 2.3e-09 66.2 44 65.9
AL3G26610 Arabidopsis lyrata HOM05D000276 ORTHO05D003951 2.3e-09 66.2 44 65.9
AT1G53850 Arabidopsis thaliana HOM05D000276 ORTHO05D003951 2.3e-09 66.2 44 65.9
AT3G14290 Arabidopsis thaliana HOM05D000276 ORTHO05D003951 2.3e-09 66.2 44 65.9
BcaB02g10884 Brassica carinata HOM05D000276 ORTHO05D003951 2.3e-09 66.2 44 65.9
BcaB04g17055 Brassica carinata HOM05D000276 ORTHO05D003951 2.3e-09 66.2 44 65.9
BcaB07g33287 Brassica carinata HOM05D000276 ORTHO05D003951 2.3e-09 66.2 44 65.9
BcaC01g01415 Brassica carinata HOM05D000276 ORTHO05D003951 2.3e-09 66.2 44 65.9
BcaC08g43563 Brassica carinata HOM05D000276 ORTHO05D003951 2.3e-09 66.2 44 65.9
BcaC08g44139 Brassica carinata HOM05D000276 ORTHO05D003951 2.3e-09 66.2 44 65.9
A05p17860 Brassica napus HOM05D000276 ORTHO05D003951 2.3e-09 66.2 44 65.9
A06p00740 Brassica napus HOM05D000276 ORTHO05D003951 2.3e-09 66.2 44 65.9
A08p01400 Brassica napus HOM05D000276 ORTHO05D003951 2.3e-09 66.2 44 65.9
C03p91780 Brassica napus HOM05D000276 ORTHO05D003951 2.3e-09 66.2 44 65.9
C06p09620 Brassica napus HOM05D000276 ORTHO05D003951 2.3e-09 66.2 44 65.9
C06p15390 Brassica napus HOM05D000276 ORTHO05D003951 2.3e-09 66.2 44 65.9
BolC3t21499H Brassica oleracea HOM05D000276 ORTHO05D003951 2.3e-09 66.2 44 65.9
BolC6t36034H Brassica oleracea HOM05D000276 ORTHO05D003951 2.3e-09 66.2 44 65.9
BolC6t36711H Brassica oleracea HOM05D000276 ORTHO05D003951 2.3e-09 66.2 44 65.9
BraA05t20676Z Brassica rapa HOM05D000276 ORTHO05D003951 2.3e-09 66.2 44 65.9
BraA06t23308Z Brassica rapa HOM05D000276 ORTHO05D003951 2.3e-09 66.2 44 65.9
BraA08t32191Z Brassica rapa HOM05D000276 ORTHO05D003951 2.3e-09 66.2 44 65.9
CARHR044180 Cardamine hirsuta HOM05D000276 ORTHO05D003951 2.3e-09 66.2 44 65.9
CARHR089220 Cardamine hirsuta HOM05D000276 ORTHO05D003951 2.3e-09 66.2 44 65.9
DCAR_016091 Daucus carota HOM05D000276 ORTHO05D003951 2.3e-09 66.2 44 68.2
Migut.D00912 Erythranthe guttata HOM05D000276 ORTHO05D003951 2.3e-09 66.2 44 65.9
Migut.I01130 Erythranthe guttata HOM05D000276 ORTHO05D003951 2.3e-09 66.2 44 65.9
Thhalv10011748m.g Eutrema salsugineum HOM05D000276 ORTHO05D003951 2.3e-09 66.2 44 65.9
FvH4_3g12370 Fragaria vesca HOM05D000276 ORTHO05D003951 2.3e-09 66.2 44 68.2
FAN21G3270 Fragaria x ananassa HOM05D000276 ORTHO05D003951 2.3e-09 66.2 44 68.2
FAN25G3254 Fragaria x ananassa HOM05D000276 ORTHO05D003951 2.3e-09 66.2 44 68.2
Lj5g0013104 Lotus japonicus HOM05D000276 ORTHO05D003951 2.3e-09 66.2 44 68.2
Sp1g40340 Schrenkiella parvula HOM05D000276 ORTHO05D003951 2.3e-09 66.2 44 65.9
THA.LOC104810393 Tarenaya hassleriana HOM05D000276 ORTHO05D003951 2.3e-09 66.2 44 65.9
THA.LOC104815597 Tarenaya hassleriana HOM05D000276 ORTHO05D003951 2.3e-09 66.2 44 65.9
Dinv37819 Davidia involucrata HOM05D000276 ORTHO05D003951 3.0e-09 65.9 44 68.2
AagrBONN_evm.TU.Sc2ySwM_228.1614 Anthoceros agrestis HOM05D000276 ORTHO05D003951 4.0e-09 65.5 44 65.9
AUR62040817 Chenopodium quinoa HOM05D000276 ORTHO05D003951 4.0e-09 65.5 44 63.6
COL.COLO4_30862 Corchorus olitorius HOM05D000276 ORTHO05D003951 4.0e-09 65.5 44 65.9
DCAR_022650 Daucus carota HOM05D000276 ORTHO05D003951 4.0e-09 65.5 44 68.2
Oeu015472.1 Olea europaea HOM05D000276 ORTHO05D003951 4.0e-09 65.5 44 68.2
AUR62002200 Chenopodium quinoa HOM05D000276 ORTHO05D003951 5.2e-09 65.1 44 63.6
AUR62015501 Chenopodium quinoa HOM05D000276 ORTHO05D003951 5.2e-09 65.1 44 63.6
Thecc.06G129900 Theobroma cacao HOM05D000276 ORTHO05D003951 5.2e-09 65.1 44 65.9
Cre17.g724350 Chlamydomonas reinhardtii HOM05D000276 ORTHO05D003951 8.8e-09 64.3 50 60.0
Pp3c14_23290 Physcomitrium patens HOM05D000276 ORTHO05D003951 1.2e-08 63.9 44 65.9
Pp3c17_20640 Physcomitrium patens HOM05D000276 ORTHO05D003951 1.2e-08 63.9 44 65.9
Potri.003G072500 Populus trichocarpa HOM05D000276 ORTHO05D003951 1.2e-08 63.9 44 65.9
Sabra03G0043300 Salix brachista HOM05D000276 ORTHO05D003951 1.2e-08 63.9 44 65.9
AagrBONN_evm.TU.Sc2ySwM_368.770 Anthoceros agrestis HOM05D000276 ORTHO05D003951 1.5e-08 63.5 44 63.6
MELO3C025735.2 Cucumis melo HOM05D000276 ORTHO05D003951 1.5e-08 63.5 43 67.4
Carub.0001s4313 Capsella rubella HOM05D000276 ORTHO05D003951 2.0e-08 63.2 44 63.6
Carub.0003s1398 Capsella rubella HOM05D000276 ORTHO05D003951 2.0e-08 63.2 44 63.6
C04p72800 Brassica napus HOM05D000276 ORTHO05D003951 1.7e-07 60.1 42 61.9
Mapoly0080s0084 Marchantia polymorpha HOM05D000276 ORTHO05D003951 1.7e-07 60.1 44 63.6
Mapoly0008s0026 Marchantia polymorpha HOM05D000276 ORTHO05D003951 2.2e-07 59.7 44 59.1


User provided reference genes

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