Gene: Pp3c17_20640

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c17_20640
  • Transcript Identifier Pp3c17_20640V3.4
  • Gene Type Coding gene
  • Location Chr17 : 13768659-13771363 : positive

Gene Family Information

  • ID HOM05D000276
  • #Genes/#Species 1584/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c17_20640V3.4
  • pacid 32905750
  • alias Phpat.017G078900
  • alias Phypa_127390
  • alias Pp1s65_295V6
  • uniprot A0A2K1J4T6

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006511
IEA
GOA Databaseubiquitin-dependent protein catabolic process
GO:0006511
IEA
InterProubiquitin-dependent protein catabolic process
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT1G53850
GO:0010498
IBA
GOA Databaseproteasomal protein catabolic process
GO:0051603
IEA
GOA Databaseproteolysis involved in cellular protein catabolic process
GO:0051603
IEA
InterProproteolysis involved in cellular protein catabolic process
GO:0043161
IEA
GOA Databaseproteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043161
IEA
InterProproteasome-mediated ubiquitin-dependent protein catabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004540
ISO
PLAZA Integrative Orthologyribonuclease activity AT1G53850
GO:0003735
ISO
PLAZA Integrative Orthologystructural constituent of ribosome AT1G53850

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042788
ISO
PLAZA Integrative Orthologypolysomal ribosome AT1G53850
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G53850
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT1G53850
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G53850
GO:0022626
ISO
PLAZA Integrative Orthologycytosolic ribosome AT1G53850
GO:0005634
IBA
IEA
GOA Databasenucleus
GO:0005839
IBA
IEA
GOA Databaseproteasome core complex
GO:0005839
IEA
InterProproteasome core complex
GO:0019773
IBA
IEA
GOA Databaseproteasome core complex, alpha-subunit complex
GO:0019773
IEA
InterProproteasome core complex, alpha-subunit complex
GO:0000502
IEA
GOA Databaseproteasome complex
GO:0005737
IEA
GOA Databasecytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR029055 Nucleophile aminohydrolases, N-terminal
IPR000426 Proteasome alpha-subunit, N-terminal domain
IPR001353 Proteasome, subunit alpha/beta
IPR033812 Proteasome subunit alpha5
Mapman id Description
19.2.5.1.1.5 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.20S core particle.alpha-type components.component alpha type-5