Gene: AT1G53850
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G53850
- Transcript Identifier AT1G53850.1
- Gene Type Coding gene
- Location Chr1 : 20104131-20105792 : negative
Gene Family Information
- ID HOM05D000276
- #Genes/#Species 1584/100
- Phylogenetic origin
- ID ORTHO05D003951
- #Genes/#Species 197/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT1G53850.1
- symbol PAE1
- Alias ATPAE1,ARABIDOPSIS 20S PROTEASOME ALPHA SUBUNIT E1
- uniprot O81149
Descriptions
- Description 20S proteasome alpha subunit E1
- Computational description 20S proteasome alpha subunit E1 (PAE1); FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: response to cadmium ion, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex, cytosolic ribosome, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: 20S proteasome alpha subunit E2 (TAIR:AT3G14290.1); Has 7954 Blast hits to 7950 proteins in 569 species: Archae - 901; Bacteria - 213; Metazoa - 2759; Fungi - 1863; Plants - 1012; Viruses - 0; Other Eukaryotes - 1206 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0051603 | IEA | GOA Database | proteolysis involved in cellular protein catabolic process | |
GO:0051603 | IEA | InterPro | proteolysis involved in cellular protein catabolic process | |
GO:0090501 | IEA | GOA Database | RNA phosphodiester bond hydrolysis | |
GO:0046686 | IEP | GOA Database | response to cadmium ion | |
GO:0006511 | IEA | GOA Database | ubiquitin-dependent protein catabolic process | |
GO:0006511 | TAS | Gene Ontology | ubiquitin-dependent protein catabolic process | 1 |
GO:0006511 | IEA | InterPro | ubiquitin-dependent protein catabolic process | |
GO:0043161 | IEA | Gene Ontology | proteasome-mediated ubiquitin-dependent protein catabolic process | |
GO:0043161 | IEA | InterPro | proteasome-mediated ubiquitin-dependent protein catabolic process | |
GO:0010498 | IBA | Gene Ontology | proteasomal protein catabolic process | 2 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003735 | IDA | GOA Database | structural constituent of ribosome | |
GO:0004540 | IDA | Gene Ontology | ribonuclease activity | 3 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005737 | IEA | GOA Database | cytoplasm | |
GO:0005737 | IDA | Gene Ontology | cytoplasm | 3 |
GO:0005634 | IEA | GOA Database | nucleus | |
GO:0005634 | IDA, HDA ISM, IBA | Gene Ontology | nucleus | 2 3 4 |
GO:0005774 | IDA | GOA Database | vacuolar membrane | |
GO:0005886 | IDA | GOA Database | plasma membrane | |
GO:0022626 | IDA | GOA Database | cytosolic ribosome | |
GO:0022626 | HDA | Gene Ontology | cytosolic ribosome | 5 |
GO:0005829 | IDA | GOA Database | cytosol | |
GO:0005829 | HDA | Gene Ontology | cytosol | 6 |
GO:0000502 | IEA | GOA Database | proteasome complex | |
GO:0000502 | IDA | Gene Ontology | proteasome complex | 7 |
GO:0019773 | IEA | GOA Database | proteasome core complex, alpha-subunit complex | |
GO:0019773 | ISS, IBA | Gene Ontology | proteasome core complex, alpha-subunit complex | 2 |
GO:0019773 | IEA | InterPro | proteasome core complex, alpha-subunit complex | |
GO:0005839 | IEA | GOA Database | proteasome core complex | |
GO:0005839 | IBA TAS | Gene Ontology | proteasome core complex | 2 8 |
GO:0005839 | IEA | InterPro | proteasome core complex | |
GO:0000325 | HDA | Gene Ontology | plant-type vacuole | 9 |
GO:0042788 | IDA | GOA Database | polysomal ribosome |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
19.2.5.1.1.5 | Protein homeostasis.ubiquitin-proteasome system.26S proteasome.20S core particle.alpha-type components.component alpha type-5 |