Gene: Carub.0003s1398

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0003s1398
  • Transcript Identifier Carub.0003s1398.1
  • Gene Type Coding gene
  • Location scaffold_3 : 4885157-4887098 : positive

Gene Family Information

  • ID HOM05D000276
  • #Genes/#Species 1584/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0003s1398.v1.1
  • pacid 39239230
  • synonym Carubv10014518m.g

Descriptions

  • Description K02729 - 20S proteasome subunit alpha 5 (PSMA5)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043161
IEA
InterProproteasome-mediated ubiquitin-dependent protein catabolic process
GO:0051603
IEA
InterProproteolysis involved in cellular protein catabolic process
GO:0006511
IEA
InterProubiquitin-dependent protein catabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
ISO
PLAZA Integrative Orthologystructural constituent of ribosome AT3G14290
GO:0004540
ISO
PLAZA Integrative Orthologyribonuclease activity AT3G14290

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019773
IEA
InterProproteasome core complex, alpha-subunit complex
GO:0005839
IEA
InterProproteasome core complex
GO:0022626
ISO
PLAZA Integrative Orthologycytosolic ribosome AT3G14290
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G14290
GO:0000502
ISO
PLAZA Integrative Orthologyproteasome complex AT3G14290
GO:0042788
ISO
PLAZA Integrative Orthologypolysomal ribosome AT3G14290

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR029055 Nucleophile aminohydrolases, N-terminal
IPR033812 Proteasome subunit alpha5
IPR001353 Proteasome, subunit alpha/beta
IPR000426 Proteasome alpha-subunit, N-terminal domain
Mapman id Description
19.2.5.1.1.5 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.20S core particle.alpha-type components.component alpha type-5