Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_28812 Sequoiadendron giganteum HOM05D006543 ORTHO05D008308 9.9e-135 483.4 237 100.0
SEGI_06622 Sequoiadendron giganteum HOM05D006543 ORTHO05D008308 4.0e-120 434.9 212 100.0
CANSAT80G2173 Cannabis sativa HOM05D006543 ORTHO05D008308 5.0e-62 241.9 192 60.4
FvH4_5g07331 Fragaria vesca HOM05D006543 ORTHO05D008308 6.5e-62 241.5 178 64.0
PSO729G0022 Papaver somniferum HOM05D006543 ORTHO05D008308 3.2e-61 239.2 230 54.8
Prupe.5G157200 Prunus persica HOM05D006543 ORTHO05D008308 9.4e-61 237.7 209 56.0
Sopen03g030490 Solanum pennellii HOM05D006543 ORTHO05D008308 1.6e-60 236.9 219 55.3
GSVIVG01007545001 Vitis vinifera HOM05D006543 ORTHO05D008308 3.6e-60 235.7 224 54.9
CAN.G352.10 Capsicum annuum HOM05D006543 ORTHO05D008308 4.7e-60 235.3 191 56.0
Haze_07303 Corylus avellana HOM05D006543 ORTHO05D008308 4.7e-60 235.3 229 53.7
Solyc03g111360.3 Solanum lycopersicum HOM05D006543 ORTHO05D008308 4.7e-60 235.3 219 55.3
Ciclev10020014m.g Citrus clementina HOM05D006543 ORTHO05D008308 8.0e-60 234.6 174 63.2
Aqoxy5G03584 Aquilegia oxysepala HOM05D006543 ORTHO05D008308 1.0e-59 234.2 190 57.9
Gorai.006G270300 Gossypium raimondii HOM05D006543 ORTHO05D008308 1.4e-59 233.8 174 60.9
PGSC0003DMG400015239 Solanum tuberosum HOM05D006543 ORTHO05D008308 1.4e-59 233.8 225 54.2
Hund18538 Selenicereus undatus HOM05D006543 ORTHO05D008308 1.8e-59 233.4 174 64.9
Thecc.03G122600 Theobroma cacao HOM05D006543 ORTHO05D008308 1.8e-59 233.4 186 58.6
Gohir.A09G244900 Gossypium hirsutum HOM05D006543 ORTHO05D008308 3.0e-59 232.6 174 60.9
Nn3g16581 Nelumbo nucifera HOM05D006543 ORTHO05D008308 3.0e-59 232.6 214 54.2
MD14G1163800 Malus domestica HOM05D006543 ORTHO05D008308 5.2e-59 231.9 194 57.2
Atru.chr9.1008 Acer truncatum HOM05D006543 ORTHO05D008308 6.8e-59 231.5 203 55.7
Lj1g0002208 Lotus japonicus HOM05D006543 ORTHO05D008308 6.8e-59 231.5 209 54.5
RcHm_v2.0_Chr7g0191211 Rosa chinensis HOM05D006543 ORTHO05D008308 6.8e-59 231.5 176 62.5
COL.COLO4_09265 Corchorus olitorius HOM05D006543 ORTHO05D008308 8.8e-59 231.1 204 54.9
Peaxi162Scf00089g00625 Petunia axillaris HOM05D006543 ORTHO05D008308 8.8e-59 231.1 186 59.1
PGR044G1877 Punica granatum HOM05D006543 ORTHO05D008308 1.2e-58 230.7 190 58.4
TAR374G1424 Trochodendron aralioides HOM05D006543 ORTHO05D008308 2.0e-58 229.9 204 56.4
Aa31LG1G18710 Aethionema arabicum HOM05D006543 ORTHO05D008308 2.6e-58 229.6 216 53.7
arahy.Tifrunner.gnm1.ann1.YD5AXN Arachis hypogaea HOM05D006543 ORTHO05D008308 2.6e-58 229.6 212 53.8
Phvul.009G169000 Phaseolus vulgaris HOM05D006543 ORTHO05D008308 2.6e-58 229.6 212 52.4
AUR62025730 Chenopodium quinoa HOM05D006543 ORTHO05D008308 3.4e-58 229.2 174 62.6
MBI06_g38704_MAGBIO Magnolia biondii HOM05D006543 ORTHO05D008308 3.4e-58 229.2 207 57.0
Rhsim12G0172000 Rhododendron simsii HOM05D006543 ORTHO05D008308 4.4e-58 228.8 188 57.4
TWI14G0972 Tripterygium wilfordii HOM05D006543 ORTHO05D008308 4.4e-58 228.8 227 52.4
Duzib068G0092 Durio zibethinus HOM05D006543 ORTHO05D008308 5.7e-58 228.4 174 61.5
Sabra12G0067500 Salix brachista HOM05D006543 ORTHO05D008308 5.7e-58 228.4 190 55.8
arahy.Tifrunner.gnm1.ann1.8LT8QW Arachis hypogaea HOM05D006543 ORTHO05D008308 1.3e-57 227.3 212 53.3
QL10p005246 Quercus lobata HOM05D006543 ORTHO05D008308 1.3e-57 227.3 174 60.3
vmacro16708 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 1.3e-57 227.3 188 58.0
Os12g0270100 Oryza sativa ssp. japonica HOM05D006543 ORTHO05D008308 1.7e-57 226.9 189 57.7
MELO3C026233.2 Cucumis melo HOM05D006543 ORTHO05D008308 2.2e-57 226.5 238 51.3
Thhalv10004112m.g Eutrema salsugineum HOM05D006543 ORTHO05D008308 2.2e-57 226.5 176 59.7
Glyma.04G192800 Glycine max HOM05D006543 ORTHO05D008308 2.2e-57 226.5 212 51.9
AUR62001276 Chenopodium quinoa HOM05D006543 ORTHO05D008308 2.8e-57 226.1 174 62.1
ClCG06G017630 Citrullus lanatus HOM05D006543 ORTHO05D008308 2.8e-57 226.1 195 57.4
Lj5A100T59 Lonicera japonica HOM05D006543 ORTHO05D008308 2.8e-57 226.1 174 60.3
Nitab4.5_0003282g0090 Nicotiana tabacum HOM05D006543 ORTHO05D008308 2.8e-57 226.1 174 61.5
Nitab4.5_0004750g0040 Nicotiana tabacum HOM05D006543 ORTHO05D008308 2.8e-57 226.1 222 51.4
CARHR277150 Cardamine hirsuta HOM05D006543 ORTHO05D008308 3.7e-57 225.7 180 58.3
MSTRG.11294 Avicennia marina HOM05D006543 ORTHO05D008308 4.8e-57 225.3 188 55.9
Carub.0008s2404 Capsella rubella HOM05D006543 ORTHO05D008308 4.8e-57 225.3 213 52.1
Zm00001eb001600 Zea mays HOM05D006543 ORTHO05D008308 4.8e-57 225.3 244 48.4
BcaNung06574 Brassica carinata HOM05D006543 ORTHO05D008308 6.3e-57 224.9 179 59.8
BolC9t53839H Brassica oleracea HOM05D006543 ORTHO05D008308 6.3e-57 224.9 179 59.8
Sp2g26410 Schrenkiella parvula HOM05D006543 ORTHO05D008308 6.3e-57 224.9 179 59.2
Ah.15g095320 Amaranthus hybridus HOM05D006543 ORTHO05D008308 8.3e-57 224.6 174 60.9
Actinidia37252 Actinidia chinensis HOM05D006543 ORTHO05D008308 1.1e-56 224.2 245 51.8
EL10Ac7g18072 Beta vulgaris HOM05D006543 ORTHO05D008308 1.1e-56 224.2 174 62.1
ECA246G2708 Erigeron canadensis HOM05D006543 ORTHO05D008308 1.8e-56 223.4 174 60.9
Psat5g141840 Pisum sativum HOM05D006543 ORTHO05D008308 2.4e-56 223.0 224 51.3
Sed0023544 Sechium edule HOM05D006543 ORTHO05D008308 2.4e-56 223.0 176 60.2
Hma1.2p1_0046F.1_g027560 Hydrangea macrophylla HOM05D006543 ORTHO05D008308 3.1e-56 222.6 225 51.1
Lalb_Chr08g0236931 Lupinus albus HOM05D006543 ORTHO05D008308 3.1e-56 222.6 223 52.5
AT5G63290 Arabidopsis thaliana HOM05D006543 ORTHO05D008308 5.4e-56 221.9 217 51.2
AL8G40370 Arabidopsis lyrata HOM05D006543 ORTHO05D008308 7.0e-56 221.5 180 58.9
Sc04g0000970 Simmondsia chinensis HOM05D006543 ORTHO05D008308 7.0e-56 221.5 174 58.6
Oeu045480.1 Olea europaea HOM05D006543 ORTHO05D008308 9.1e-56 221.1 193 52.8
CiPaw.11G012100 Carya illinoinensis HOM05D006543 ORTHO05D008308 1.6e-55 220.3 174 59.8
BcaB04g19911 Brassica carinata HOM05D006543 ORTHO05D008308 2.0e-55 219.9 175 58.9
C09p09260 Brassica napus HOM05D006543 ORTHO05D008308 2.0e-55 219.9 179 58.7
Potri.012G092900 Populus trichocarpa HOM05D006543 ORTHO05D008308 2.0e-55 219.9 181 56.9
Manes.06G115100 Manihot esculenta HOM05D006543 ORTHO05D008308 4.5e-55 218.8 193 56.5
Cc04_g10340 Coffea canephora HOM05D006543 ORTHO05D008308 5.9e-55 218.4 237 48.9
CsaV3_1G000810 Cucumis sativus L. HOM05D006543 ORTHO05D008308 5.9e-55 218.4 174 59.8
CSS0036636 Camellia sinensis var. sinensis HOM05D006543 ORTHO05D008308 7.7e-55 218.0 188 54.3
Lsat_1_v5_gn_5_13221 Lactuca sativa HOM05D006543 ORTHO05D008308 7.7e-55 218.0 188 55.9
HanXRQChr05g0154751 Helianthus annuus HOM05D006543 ORTHO05D008308 1.0e-54 217.6 174 58.6
Medtr3g075110 Medicago truncatula HOM05D006543 ORTHO05D008308 1.0e-54 217.6 176 56.8
CDE04G0939 Ceratophyllum demersum HOM05D006543 ORTHO05D008308 3.8e-54 215.7 187 56.1
TPR.G24245 Trifolium pratense HOM05D006543 ORTHO05D008308 5.0e-54 215.3 221 50.2
A09p08200 Brassica napus HOM05D006543 ORTHO05D008308 8.6e-54 214.5 180 57.2
BraA09t36471Z Brassica rapa HOM05D006543 ORTHO05D008308 8.6e-54 214.5 180 57.2
Pp3c13_23570 Physcomitrium patens HOM05D006543 ORTHO05D008308 8.6e-54 214.5 176 58.5
THA.LOC104818195 Tarenaya hassleriana HOM05D006543 ORTHO05D008308 1.5e-53 213.8 180 54.4
Mapoly0005s0190 Marchantia polymorpha HOM05D006543 ORTHO05D008308 4.0e-51 205.7 201 49.8
SGA_v2.0_scaffold338G49246 Striga asiatica HOM05D006543 ORTHO05D008308 5.2e-51 205.3 195 52.3
Lsat_1_v5_gn_4_53181 Lactuca sativa HOM05D006543 ORTHO05D008308 3.4e-50 202.6 188 53.2
Migut.I00467 Erythranthe guttata HOM05D006543 ORTHO05D008308 3.7e-49 199.1 194 49.5
Cre03.g171461 Chlamydomonas reinhardtii HOM05D006543 ORTHO05D008308 7.8e-47 191.4 172 51.7
CBR_g58805 Chara braunii HOM05D006543 ORTHO05D008308 5.0e-46 188.7 193 48.2
SMO364G0036 Selaginella moellendorffii HOM05D006543 ORTHO05D008308 7.3e-45 184.9 177 55.9
MCO01G029 Micromonas commoda HOM05D006543 ORTHO05D008308 6.4e-41 171.8 180 48.3
FvH4_5g07462 Fragaria vesca HOM05D006543 ORTHO05D008308 2.4e-40 169.9 132 61.4
unitig_22.g5878 Utricularia gibba HOM05D006543 ORTHO05D008308 4.1e-40 169.1 137 60.6
Gohir.D09G245800 Gossypium hirsutum HOM05D006543 ORTHO05D008308 1.2e-39 167.5 126 61.9
PRCOL_00001606 Prasinoderma coloniale HOM05D006543 ORTHO05D008308 3.9e-38 162.5 175 45.7
Glyma.06G173067 Glycine max HOM05D006543 ORTHO05D008308 1.8e-35 153.7 175 48.0
CAN.G352.9 Capsicum annuum HOM05D006543 ORTHO05D003127 4.4e-34 149.1 116 58.6
MD06G1157200 Malus domestica HOM05D006543 ORTHO05D008308 3.2e-32 142.9 132 52.3
Ca_16091_v3 Cicer arietinum L. HOM05D006543 ORTHO05D008308 1.6e-28 130.6 90 64.4
Dinv11106 Davidia involucrata HOM05D006543 ORTHO05D008308 1.3e-22 110.9 68 72.1
VMungo1309G1872 Vigna mungo HOM05D006543 ORTHO05D008308 2.5e-21 106.7 68 67.6
AagrBONN_evm.TU.Sc2ySwM_344.2040 Anthoceros agrestis HOM05D006543 ORTHO05D008308 4.3e-21 105.9 132 40.9
vmacro16659 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 2.1e-20 103.6 68 64.7
ATR0733G153 Amborella trichopoda HOM05D006543 ORTHO05D008308 1.5e-18 97.4 66 66.7
Actinidia36787 Actinidia chinensis HOM05D006543 ORTHO05D008308 1.1e-13 81.3 56 62.5
Oeu045471.1 Olea europaea HOM05D006543 ORTHO05D008308 1.8e-11 73.9 53 58.5
Oeu037566.1 Olea europaea HOM05D006543 ORTHO05D008308 9.0e-11 71.6 45 64.4
FvH4_5g07400 Fragaria vesca HOM05D006543 ORTHO05D008308 8.7e-06 55.1 66 47.0


User provided reference genes

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