Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_28404 Sequoiadendron giganteum HOM05D005942 ORTHO05D007209 8.4e-48 193.4 97 100.0
ATR0099G013 Amborella trichopoda HOM05D005942 ORTHO05D007209 1.0e-13 80.1 73 54.8
CDE04G3550 Ceratophyllum demersum HOM05D005942 ORTHO05D007209 1.3e-13 79.7 67 58.2
AagrBONN_evm.TU.Sc2ySwM_369.233 Anthoceros agrestis HOM05D005942 ORTHO05D007209 3.0e-13 78.6 73 56.2
TAR624G0006 Trochodendron aralioides HOM05D005942 ORTHO05D007209 3.9e-13 78.2 72 52.8
QL05p000862 Quercus lobata HOM05D005942 ORTHO05D007209 6.7e-13 77.4 72 52.8
QL05p001132 Quercus lobata HOM05D005942 ORTHO05D007209 6.7e-13 77.4 72 52.8
Aqoxy7G00926 Aquilegia oxysepala HOM05D005942 ORTHO05D007209 1.1e-12 76.6 73 49.3
GSVIVG01016664001 Vitis vinifera HOM05D005942 ORTHO05D007209 1.5e-12 76.3 68 54.4
TWI14G0802 Tripterygium wilfordii HOM05D005942 ORTHO05D007209 1.9e-12 75.9 72 47.2
Pp3c10_6430 Physcomitrium patens HOM05D005942 ORTHO05D007209 2.5e-12 75.5 72 45.8
Nn3g21985 Nelumbo nucifera HOM05D005942 ORTHO05D007209 3.3e-12 75.1 72 50.0
RcHm_v2.0_Chr2g0147901 Rosa chinensis HOM05D005942 ORTHO05D007209 3.3e-12 75.1 72 48.6
Dinv20380 Davidia involucrata HOM05D005942 ORTHO05D007209 4.3e-12 74.7 72 47.2
Eucgr.J02595 Eucalyptus grandis HOM05D005942 ORTHO05D007209 5.7e-12 74.3 66 50.0
Mapoly0020s0016 Marchantia polymorpha HOM05D005942 ORTHO05D007209 5.7e-12 74.3 73 49.3
PGR102G3180 Punica granatum HOM05D005942 ORTHO05D007209 5.7e-12 74.3 66 50.0
Hund18636 Selenicereus undatus HOM05D005942 ORTHO05D007209 5.7e-12 74.3 74 48.6
CiPaw.02G130800 Carya illinoinensis HOM05D005942 ORTHO05D007209 7.4e-12 73.9 66 51.5
Lsat_1_v5_gn_5_137681 Lactuca sativa HOM05D005942 ORTHO05D007209 7.4e-12 73.9 66 54.5
Dinv37817 Davidia involucrata HOM05D005942 ORTHO05D007209 1.3e-11 73.2 67 53.7
HanXRQChr10g0311801 Helianthus annuus HOM05D005942 ORTHO05D007209 1.3e-11 73.2 66 51.5
MBI13_g01657_MAGBIO Magnolia biondii HOM05D005942 ORTHO05D007209 1.3e-11 73.2 73 47.9
Oeu019509.2 Olea europaea HOM05D005942 ORTHO05D007209 1.6e-11 72.8 68 51.5
EL10Ac7g16496 Beta vulgaris HOM05D005942 ORTHO05D007209 2.2e-11 72.4 72 48.6
CSS0026354 Camellia sinensis var. sinensis HOM05D005942 ORTHO05D007209 2.8e-11 72.0 67 52.2
FAN09G3780 Fragaria x ananassa HOM05D005942 ORTHO05D007209 2.8e-11 72.0 72 48.6
Atru.chr1.4156 Acer truncatum HOM05D005942 ORTHO05D007209 3.7e-11 71.6 65 50.8
CAN.G790.55 Capsicum annuum HOM05D005942 ORTHO05D007209 3.7e-11 71.6 70 48.6
Lj9C538T8 Lonicera japonica HOM05D005942 ORTHO05D007209 3.7e-11 71.6 73 45.2
vmacro18719 Vaccinium macrocarpon HOM05D005942 ORTHO05D007209 3.7e-11 71.6 73 46.6
DCAR_007660 Daucus carota HOM05D005942 ORTHO05D007209 4.8e-11 71.2 73 45.2
Peaxi162Scf00038g02336 Petunia axillaris HOM05D005942 ORTHO05D007209 4.8e-11 71.2 70 48.6
Hma1.2p1_0090F.1_g045800 Hydrangea macrophylla HOM05D005942 ORTHO05D007209 6.3e-11 70.9 70 47.1
Prupe.3G030900 Prunus persica HOM05D005942 ORTHO05D007209 6.3e-11 70.9 72 45.8
Sabra03G0043700 Salix brachista HOM05D005942 ORTHO05D007209 6.3e-11 70.9 65 50.8
Thecc.06G130500 Theobroma cacao HOM05D005942 ORTHO05D007209 6.3e-11 70.9 66 50.0
AUR62001402 Chenopodium quinoa HOM05D005942 ORTHO05D007209 8.2e-11 70.5 72 48.6
AUR62025613 Chenopodium quinoa HOM05D005942 ORTHO05D007209 8.2e-11 70.5 72 48.6
AUR62043501 Chenopodium quinoa HOM05D005942 ORTHO05D007209 8.2e-11 70.5 72 48.6
Ciclev10024928m.g Citrus clementina HOM05D005942 ORTHO05D007209 8.2e-11 70.5 65 50.8
CANSAT56G3801 Cannabis sativa HOM05D005942 ORTHO05D007209 1.1e-10 70.1 64 48.4
CARHR065220 Cardamine hirsuta HOM05D005942 ORTHO05D007209 1.1e-10 70.1 72 44.4
Rhsim08G0245000 Rhododendron simsii HOM05D005942 ORTHO05D007209 1.1e-10 70.1 73 45.2
CsaV3_7G033920 Cucumis sativus L. HOM05D005942 ORTHO05D007209 1.4e-10 69.7 65 50.8
ECA234G0243 Erigeron canadensis HOM05D005942 ORTHO05D007209 1.4e-10 69.7 73 43.8
FvH4_6g35860 Fragaria vesca HOM05D005942 ORTHO05D007209 1.4e-10 69.7 72 45.8
FAN02G3526 Fragaria x ananassa HOM05D005942 ORTHO05D007209 1.4e-10 69.7 72 45.8
FAN05G1996 Fragaria x ananassa HOM05D005942 ORTHO05D007209 1.4e-10 69.7 72 45.8
FAN14G4637 Fragaria x ananassa HOM05D005942 ORTHO05D007209 1.4e-10 69.7 72 45.8
Carub.0002s1918 Capsella rubella HOM05D005942 ORTHO05D007209 1.8e-10 69.3 72 44.4
Haze_16138 Corylus avellana HOM05D005942 ORTHO05D007209 1.8e-10 69.3 72 44.4
Gohir.A05G141800 Gossypium hirsutum HOM05D005942 ORTHO05D007209 1.8e-10 69.3 63 50.8
AT1G72320 Arabidopsis thaliana HOM05D005942 ORTHO05D007209 2.4e-10 68.9 72 44.4
Cc04_g00670 Coffea canephora HOM05D005942 ORTHO05D007209 2.4e-10 68.9 73 47.9
Thhalv10018182m.g Eutrema salsugineum HOM05D005942 ORTHO05D007209 2.4e-10 68.9 66 47.0
Potri.003G073000 Populus trichocarpa HOM05D005942 ORTHO05D007209 2.4e-10 68.9 65 49.2
Gohir.D05G144100 Gossypium hirsutum HOM05D005942 ORTHO05D007209 3.1e-10 68.6 63 50.8
Gorai.009G148000 Gossypium raimondii HOM05D005942 ORTHO05D007209 3.1e-10 68.6 63 50.8
Medtr7g117545 Medicago truncatula HOM05D005942 ORTHO05D007209 3.1e-10 68.6 70 44.3
Sc12g0011030 Simmondsia chinensis HOM05D005942 ORTHO05D007209 3.1e-10 68.6 66 48.5
MSTRG.10908 Avicennia marina HOM05D005942 ORTHO05D007209 5.3e-10 67.8 69 44.9
Cfa003459 Carpinus fangiana HOM05D005942 ORTHO05D007209 5.3e-10 67.8 72 43.1
Manes.04G151100 Manihot esculenta HOM05D005942 ORTHO05D007209 5.3e-10 67.8 64 46.9
THA.LOC104813965 Tarenaya hassleriana HOM05D005942 ORTHO05D007209 5.3e-10 67.8 65 46.2
MD09G1172500 Malus domestica HOM05D005942 ORTHO05D007209 6.9e-10 67.4 66 45.5
Sp5g27400 Schrenkiella parvula HOM05D005942 ORTHO05D007209 6.9e-10 67.4 72 44.4
PGSC0003DMG400009149 Solanum tuberosum HOM05D005942 ORTHO05D007209 6.9e-10 67.4 70 47.1
Ah.15g094920 Amaranthus hybridus HOM05D005942 ORTHO05D007209 9.0e-10 67.0 72 47.2
Duzib192G0321 Durio zibethinus HOM05D005942 ORTHO05D007209 9.0e-10 67.0 63 49.2
PSO017G1617 Papaver somniferum HOM05D005942 ORTHO05D007209 9.0e-10 67.0 73 43.8
SGA_v2.0_scaffold122G33306 Striga asiatica HOM05D005942 ORTHO05D007209 9.0e-10 67.0 72 45.8
BcaC08g46688 Brassica carinata HOM05D005942 ORTHO05D007209 1.2e-09 66.6 73 39.7
C06p46680 Brassica napus HOM05D005942 ORTHO05D007209 1.2e-09 66.6 73 39.7
BolC6t39713H Brassica oleracea HOM05D005942 ORTHO05D007209 1.2e-09 66.6 73 39.7
PSO170G5566 Papaver somniferum HOM05D005942 ORTHO05D007209 1.2e-09 66.6 73 42.5
ClCG09G001410 Citrullus lanatus HOM05D005942 ORTHO05D007209 1.5e-09 66.2 65 47.7
COL.COLO4_30871 Corchorus olitorius HOM05D005942 ORTHO05D007209 1.5e-09 66.2 64 48.4
Solyc03g123640.3 Solanum lycopersicum HOM05D005942 ORTHO05D007209 1.5e-09 66.2 70 47.1
Sopen03g041410 Solanum pennellii HOM05D005942 ORTHO05D007209 1.5e-09 66.2 70 47.1
AL2G32000 Arabidopsis lyrata HOM05D005942 ORTHO05D007209 2.0e-09 65.9 72 43.1
Nitab4.5_0007678g0030 Nicotiana tabacum HOM05D005942 ORTHO05D007209 2.0e-09 65.9 73 45.2
arahy.Tifrunner.gnm1.ann1.SXV5N5 Arachis hypogaea HOM05D005942 ORTHO05D007209 3.4e-09 65.1 69 43.5
BraA07t31410Z Brassica rapa HOM05D005942 ORTHO05D007209 3.4e-09 65.1 73 38.4
Nitab4.5_0006338g0060 Nicotiana tabacum HOM05D005942 ORTHO05D007209 3.4e-09 65.1 70 44.3
SalBow7G4809 Salvia bowleyana HOM05D005942 ORTHO05D007209 3.4e-09 65.1 73 43.8
Sed0028190 Sechium edule HOM05D005942 ORTHO05D007209 3.4e-09 65.1 65 47.7
Migut.I01134 Erythranthe guttata HOM05D005942 ORTHO05D007209 4.5e-09 64.7 72 43.1
A07p38500 Brassica napus HOM05D005942 ORTHO05D007209 5.9e-09 64.3 73 38.4
MELO3C024305.2 Cucumis melo HOM05D005942 ORTHO05D007209 5.9e-09 64.3 65 47.7
TPR.G28866 Trifolium pratense HOM05D005942 ORTHO05D007209 7.6e-09 63.9 59 47.5
Ca_07883_v3 Cicer arietinum L. HOM05D005942 ORTHO05D007209 1.0e-08 63.5 59 45.8
Lj1g0014309 Lotus japonicus HOM05D005942 ORTHO05D007209 1.0e-08 63.5 61 45.9
Nitab4.5_0001873g0040 Nicotiana tabacum HOM05D005942 ORTHO05D007209 1.0e-08 63.5 70 44.3
Psat6g168240 Pisum sativum HOM05D005942 ORTHO05D007209 1.3e-08 63.2 58 48.3
Phvul.009G261600 Phaseolus vulgaris HOM05D005942 ORTHO05D007209 1.7e-08 62.8 59 49.2
Glyma.03G263200 Glycine max HOM05D005942 ORTHO05D007209 2.9e-08 62.0 59 45.8
Aa31LG4G2680 Aethionema arabicum HOM05D005942 ORTHO05D007209 6.5e-08 60.8 72 38.9
SMO118G0133 Selaginella moellendorffii HOM05D005942 ORTHO05D007209 8.5e-08 60.5 73 39.7
Lalb_Chr15g0076691 Lupinus albus HOM05D005942 ORTHO05D007209 1.1e-07 60.1 69 39.1
MCO05G275 Micromonas commoda HOM05D005942 ORTHO05D007209 1.4e-07 59.7 73 42.5
VMungo1309G0067 Vigna mungo HOM05D005942 ORTHO05D007209 1.4e-07 59.7 59 44.1
HPP92_016652 Vanilla planifolia HOM05D005942 ORTHO05D007209 2.5e-07 58.9 71 43.7
Actinidia24424 Actinidia chinensis HOM05D005942 ORTHO05D007209 1.6e-06 56.2 51 49.0
unitig_62.g23675 Utricularia gibba HOM05D005942 ORTHO05D007209 1.6e-06 56.2 73 39.7
HPP92_016646 Vanilla planifolia HOM05D005942 ORTHO05D007209 1.6e-06 56.2 68 42.6
arahy.Tifrunner.gnm1.ann1.UMP4HF Arachis hypogaea HOM05D005942 ORTHO05D007209 4.6e-06 54.7 48 47.9


User provided reference genes

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