Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_24867 Sequoiadendron giganteum HOM05D002535 ORTHO05D024734 2.1e-74 282.3 150 100.0
SEGI_29257 Sequoiadendron giganteum HOM05D002535 ORTHO05D008858 1.5e-64 249.6 131 100.0
SEGI_27553 Sequoiadendron giganteum HOM05D002535 ORTHO05D008858 4.3e-59 231.5 120 100.0
ATR0680G182 Amborella trichopoda HOM05D002535 ORTHO05D008858 5.3e-17 91.7 133 42.1
Sabra04G0026000 Salix brachista HOM05D002535 ORTHO05D008858 1.2e-16 90.5 147 38.8
CiPaw.10G047500 Carya illinoinensis HOM05D002535 ORTHO05D008858 5.9e-16 88.2 138 37.7
Nn1g04049 Nelumbo nucifera HOM05D002535 ORTHO05D008858 3.8e-15 85.5 138 37.7
arahy.Tifrunner.gnm1.ann1.B9F9XG Arachis hypogaea HOM05D002535 ORTHO05D008858 5.0e-15 85.1 140 40.7
TAR624G1333 Trochodendron aralioides HOM05D002535 ORTHO05D008858 5.0e-15 85.1 145 40.7
arahy.Tifrunner.gnm1.ann1.UAEH3Q Arachis hypogaea HOM05D002535 ORTHO05D008858 1.9e-14 83.2 140 40.0
Potri.004G041900 Populus trichocarpa HOM05D002535 ORTHO05D008858 1.9e-14 83.2 147 36.1
Glyma.07G195700 Glycine max HOM05D002535 ORTHO05D008858 9.3e-14 80.9 142 40.1
Haze_06485 Corylus avellana HOM05D002535 ORTHO05D008858 1.6e-13 80.1 138 34.8
Lalb_Chr09g0327621 Lupinus albus HOM05D002535 ORTHO05D008858 1.6e-13 80.1 140 35.7
Cfa000431 Carpinus fangiana HOM05D002535 ORTHO05D008858 3.6e-13 79.0 126 39.7
Duzib235G0442 Durio zibethinus HOM05D002535 ORTHO05D008858 4.6e-13 78.6 129 37.2
MD00G1095300 Malus domestica HOM05D002535 ORTHO05D008858 6.1e-13 78.2 139 38.1
Manes.17G044100 Manihot esculenta HOM05D002535 ORTHO05D008858 6.1e-13 78.2 139 36.7
CDE09G0049 Ceratophyllum demersum HOM05D002535 ORTHO05D008858 7.9e-13 77.8 125 39.2
Prupe.4G045200 Prunus persica HOM05D002535 ORTHO05D008858 1.0e-12 77.4 139 37.4
QL05p039941 Quercus lobata HOM05D002535 ORTHO05D008858 1.4e-12 77.0 139 36.7
Cpa.g.sc27.54 Carica papaya HOM05D002535 ORTHO05D008858 1.8e-12 76.6 141 36.2
Actinidia05620 Actinidia chinensis HOM05D002535 ORTHO05D008858 6.7e-12 74.7 139 32.4
CSS0043844 Camellia sinensis var. sinensis HOM05D002535 ORTHO05D008858 6.7e-12 74.7 127 39.4
PSO675G0269 Papaver somniferum HOM05D002535 ORTHO05D008858 6.7e-12 74.7 125 38.4
Phvul.002G228200 Phaseolus vulgaris HOM05D002535 ORTHO05D008858 6.7e-12 74.7 124 41.1
SMO361G0591 Selaginella moellendorffii HOM05D002535 ORTHO05D008858 1.5e-11 73.6 118 36.4
Lj4g0015787 Lotus japonicus HOM05D002535 ORTHO05D008858 1.9e-11 73.2 143 39.2
MBI18_g16997_MAGBIO Magnolia biondii HOM05D002535 ORTHO05D008858 1.9e-11 73.2 146 37.0
Psat7g112600 Pisum sativum HOM05D002535 ORTHO05D008858 2.5e-11 72.8 141 38.3
Rhsim13G0176900 Rhododendron simsii HOM05D002535 ORTHO05D008858 3.3e-11 72.4 118 38.1
SGA_v2.0_scaffold100G29671 Striga asiatica HOM05D002535 ORTHO05D008858 4.3e-11 72.0 145 33.1
Aqoxy1G02517 Aquilegia oxysepala HOM05D002535 ORTHO05D008858 5.7e-11 71.6 130 35.4
CARHR053870 Cardamine hirsuta HOM05D002535 ORTHO05D008858 7.4e-11 71.2 130 33.1
Ca_18537_v3 Cicer arietinum L. HOM05D002535 ORTHO05D008858 1.3e-10 70.5 122 39.3
Dinv07549 Davidia involucrata HOM05D002535 ORTHO05D008858 1.7e-10 70.1 134 34.3
BcaB05g24079 Brassica carinata HOM05D002535 ORTHO05D008858 2.2e-10 69.7 129 31.0
TWI38G0664 Tripterygium wilfordii HOM05D002535 ORTHO05D008858 2.2e-10 69.7 140 35.0
VMungo0251G2893 Vigna mungo HOM05D002535 ORTHO05D008858 2.2e-10 69.7 142 38.7
Thecc.06G189600 Theobroma cacao HOM05D002535 ORTHO05D008858 2.8e-10 69.3 126 37.3
BraA02t06356Z Brassica rapa HOM05D002535 ORTHO05D008858 3.7e-10 68.9 127 32.3
COL.COLO4_31493 Corchorus olitorius HOM05D005670 ORTHO05D008858 3.7e-10 68.9 137 35.0
FvH4_3g09390 Fragaria vesca HOM05D002535 ORTHO05D008858 3.7e-10 68.9 139 33.1
FAN11G0332 Fragaria x ananassa HOM05D002535 ORTHO05D008858 3.7e-10 68.9 139 33.1
FAN21G0967 Fragaria x ananassa HOM05D002535 ORTHO05D008858 3.7e-10 68.9 139 33.1
RcHm_v2.0_Chr5g0008191 Rosa chinensis HOM05D002535 ORTHO05D008858 4.8e-10 68.6 139 33.8
A02p13000 Brassica napus HOM05D002535 ORTHO05D008858 6.3e-10 68.2 122 32.8
PGR004G2583 Punica granatum HOM05D002535 ORTHO05D008858 6.3e-10 68.2 122 34.4
Ciclev10014268m.g Citrus clementina HOM05D002535 ORTHO05D008858 8.2e-10 67.8 123 35.0
Hma1.2p1_0881F.1_g232060 Hydrangea macrophylla HOM05D002535 ORTHO05D008858 8.2e-10 67.8 133 32.3
CANSAT35G1983 Cannabis sativa HOM05D002535 ORTHO05D008858 1.1e-09 67.4 139 31.7
Lj2C287G7 Lonicera japonica HOM05D002535 ORTHO05D008858 1.1e-09 67.4 146 33.6
Oeu005075.2 Olea europaea HOM05D002535 ORTHO05D008858 1.1e-09 67.4 146 33.6
Haze_05739 Corylus avellana HOM05D002535 ORTHO05D024734 1.8e-09 66.6 95 40.0
Migut.M01151 Erythranthe guttata HOM05D002535 ORTHO05D008858 1.8e-09 66.6 147 31.3
TPR.G12122 Trifolium pratense HOM05D002535 ORTHO05D008858 2.4e-09 66.2 122 36.9
C02p21120 Brassica napus HOM05D002535 ORTHO05D008858 3.1e-09 65.9 130 31.5
HanXRQChr16g0517721 Helianthus annuus HOM05D002535 ORTHO05D008858 3.1e-09 65.9 124 32.3
Lsat_1_v5_gn_4_52780 Lactuca sativa HOM05D002535 ORTHO05D008858 3.1e-09 65.9 148 31.1
Aa31LG2G2260 Aethionema arabicum HOM05D002535 ORTHO05D008858 4.1e-09 65.5 149 29.5
ClCG03G005960 Citrullus lanatus HOM05D002535 ORTHO05D008858 4.1e-09 65.5 127 34.6
CsaV3_1G012200 Cucumis sativus L. HOM05D002535 ORTHO05D008858 4.1e-09 65.5 132 34.8
Atru.BG.303.p Acer truncatum HOM05D002535 ORTHO05D008858 5.3e-09 65.1 143 34.3
PGSC0003DMG400022387 Solanum tuberosum HOM05D002535 ORTHO05D008858 5.3e-09 65.1 142 32.4
CAN.G1164.16 Capsicum annuum HOM05D002535 ORTHO05D008858 6.9e-09 64.7 116 33.6
Medtr4g088920 Medicago truncatula HOM05D002535 ORTHO05D008858 6.9e-09 64.7 122 37.7
THA.LOC104821785 Tarenaya hassleriana HOM05D002535 ORTHO05D008858 6.9e-09 64.7 125 32.8
DCAR_028087 Daucus carota HOM05D002535 ORTHO05D008858 9.1e-09 64.3 118 36.4
Thhalv10022461m.g Eutrema salsugineum HOM05D002535 ORTHO05D008858 1.2e-08 63.9 127 29.9
MELO3C002594.2 Cucumis melo HOM05D002535 ORTHO05D008858 1.5e-08 63.5 132 35.6
Carub.0002s1037 Capsella rubella HOM05D002535 ORTHO05D008858 2.0e-08 63.2 130 30.0
Eucgr.D00632 Eucalyptus grandis HOM05D002535 ORTHO05D008858 2.0e-08 63.2 140 29.3
Zm00001eb065920 Zea mays HOM05D002535 ORTHO05D008858 2.0e-08 63.2 144 33.3
Cc02_g13230 Coffea canephora HOM05D002535 ORTHO05D008858 2.6e-08 62.8 131 32.8
Sp5g19600 Schrenkiella parvula HOM05D002535 ORTHO05D008858 2.6e-08 62.8 127 30.7
BcaC03g14672 Brassica carinata HOM05D002535 ORTHO05D008858 3.4e-08 62.4 127 30.7
BolC2t08252H Brassica oleracea HOM05D002535 ORTHO05D008858 3.4e-08 62.4 127 30.7
Solyc02g078390.3 Solanum lycopersicum HOM05D002535 ORTHO05D008858 3.4e-08 62.4 123 35.8
HPP92_020872 Vanilla planifolia HOM05D002535 ORTHO05D008858 3.4e-08 62.4 151 31.8
ECA234G1348 Erigeron canadensis HOM05D002535 ORTHO05D008858 4.5e-08 62.0 143 30.8
Pp3c17_13780 Physcomitrium patens HOM05D002535 ORTHO05D008858 4.5e-08 62.0 127 29.9
Pp3c17_13784 Physcomitrium patens HOM05D002535 ORTHO05D008858 4.5e-08 62.0 127 29.9
Sed0021234 Sechium edule HOM05D002535 ORTHO05D008858 7.7e-08 61.2 129 33.3
HPP92_028115 Vanilla planifolia HOM05D002535 ORTHO05D008858 7.7e-08 61.2 151 31.8
EL10Ac8g20367 Beta vulgaris HOM05D002535 ORTHO05D008858 1.0e-07 60.8 121 33.9
AUR62014804 Chenopodium quinoa HOM05D002535 ORTHO05D008858 1.0e-07 60.8 138 31.2
Sopen02g023250 Solanum pennellii HOM05D002535 ORTHO05D008858 1.0e-07 60.8 123 35.0
Ah.14g089380 Amaranthus hybridus HOM05D002535 ORTHO05D008858 1.7e-07 60.1 105 36.2
Peaxi162Scf00947g00117 Petunia axillaris HOM05D002535 ORTHO05D008858 2.2e-07 59.7 142 29.6
unitig_32.g10980 Utricularia gibba HOM05D002535 ORTHO05D008858 3.8e-07 58.9 127 28.3
AL2G19710 Arabidopsis lyrata HOM05D002535 ORTHO05D008858 1.1e-06 57.4 130 29.2
AUR62016995 Chenopodium quinoa HOM05D002535 ORTHO05D008858 2.5e-06 56.2 119 31.9
Sc05g0007730 Simmondsia chinensis HOM05D002535 ORTHO05D008858 7.2e-06 54.7 91 38.5


User provided reference genes

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